RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 FYNP06241 537 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 GHRP10912 638 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 CKBP12277 381 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 TFE3P19532 575 aaPredicted RBP5.78□□□□□ -1.48
NEK3-211ENST00000629912 ACAT1P24752 427 aaKnown RBP5.78□□□□□ -1.48
NEK3-211ENST00000629912 CYP2F1P24903 491 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 HPDP32754 393 aaPredicted RBP5.78□□□□□ -1.48
NEK3-211ENST00000629912 ADRA1BP35368 520 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 ATP5OP48047 213 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 CTCFP49711 727 aaPredicted RBP5.78□□□□□ -1.48
NEK3-211ENST00000629912 NDUFV1P49821 464 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 TKTL1P51854 596 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 ZNF135P52742 658 aaPredicted RBP5.78□□□□□ -1.48
NEK3-211ENST00000629912 SLC18A1P54219 525 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 GDF10P55107 478 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 ARL4CP56559 192 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 MAP3K7CLP57077 242 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 DAOAP59103 153 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 GUCY1A3Q02108 690 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 ADIGQ0VDE8 80 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 SCAPQ12770 1279 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 KCNJ11Q14654 390 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 MAPRE1Q15691 268 aaKnown RBP5.78□□□□□ -1.48
NEK3-211ENST00000629912 HIF1AQ16665 826 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 DCAF6Q58WW2 860 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 UBAP2Q5T6F2 1119 aaKnown RBP5.78□□□□□ -1.48
NEK3-211ENST00000629912 C1orf228Q6PIY5 440 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 NPNTQ6UXI9 565 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 PPP1R21Q6ZMI0 780 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 PAXIP1Q6ZW49 1069 aaPredicted RBP5.78□□□□□ -1.48
NEK3-211ENST00000629912 SLC24A5Q71RS6 500 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 B4GALNT4Q76KP1 1039 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 TADA2BQ86TJ2 420 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 FAM35AQ86V20 835 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 NLRP14Q86W24 1093 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 SPATS2Q86XZ4 545 aaKnown RBP5.78□□□□□ -1.48
NEK3-211ENST00000629912 CDKL3Q8IVW4 592 aaPredicted RBP5.78□□□□□ -1.48
NEK3-211ENST00000629912 SIX6OS1Q8N1H7 587 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 THEM5Q8N1Q8 247 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 FAM71DQ8N9W8 422 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 C3orf58Q8NDZ4 430 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 MCUQ8NE86 351 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 ZMIZ2Q8NF64 920 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 UHMK1Q8TAS1 419 aaKnown RBP5.78□□□□□ -1.48
NEK3-211ENST00000629912 CD99L2Q8TCZ2 262 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 BCAS4Q8TDM0 211 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 EPS8L3Q8TE67 593 aaKnown RBP5.78□□□□□ -1.48
NEK3-211ENST00000629912 RSPH1Q8WYR4 309 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 MAML1Q92585 1016 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 NTAN1Q96AB6 310 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 HAUS1Q96CS2 278 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 PCED1BQ96HM7 432 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 SUSD3Q96L08 255 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 C9orf72Q96LT7 481 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 CSPG4P5Q96PW8 444 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 XPO6Q96QU8 1125 aaKnown RBP5.78□□□□□ -1.48
NEK3-211ENST00000629912 CCT8L2Q96SF2 557 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 KCTD15Q96SI1 283 aaPredicted RBP5.78□□□□□ -1.48
NEK3-211ENST00000629912 RTP3Q9BQQ7 232 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 FTHL17Q9BXU8 183 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 ADAM33Q9BZ11 813 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 DHX35Q9H5Z1 703 aaKnown RBP5.78□□□□□ -1.48
NEK3-211ENST00000629912 ELAC1Q9H777 363 aaKnown RBP5.78□□□□□ -1.48
NEK3-211ENST00000629912 POPDC2Q9HBU9 364 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 HMX1Q9NP08 348 aaPredicted RBP5.78□□□□□ -1.48
NEK3-211ENST00000629912 PNPLA8Q9NP80 782 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 CREBZFQ9NS37 354 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 TRMT13Q9NUP7 481 aaKnown RBP5.78□□□□□ -1.48
NEK3-211ENST00000629912 GPATCH2LQ9NWQ4 482 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 KANSL3Q9P2N6 904 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 SLC24A2Q9UI40 661 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 FBXW11Q9UKB1 542 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 PCDHB8Q9UN66 801 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 AP4E1Q9UPM8 1137 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 NAALADL1Q9UQQ1 740 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 NOD1Q9Y239 953 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 RAD54BQ9Y620 910 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 USP3Q9Y6I4 520 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 FRMPD3Q5JV73 1810 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 PTPRDP23468 1912 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 THSD7BQ9C0I4 1608 aa5.77□□□□□ -1.48
NEK3-211ENST00000629912 SF3B1O75533 1304 aaKnown RBP eCLIP5.77□□□□□ -1.49
NEK3-211ENST00000629912 TCRBV7S3A2A0A539 114 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 CASTOR2A6NHX0 329 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 YJEFN3A6XGL0 299 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 E7ENQ6 273 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 H3BRJ5 948 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 M0QYT0 321 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 ARVCFO00192 962 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 EBAG9O00559 213 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 TRDMT1O14717 391 aaKnown RBP5.77□□□□□ -1.49
NEK3-211ENST00000629912 NRP1O14786 923 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 SPAG6O75602 509 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 TRPA1O75762 1119 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 B3GAT3O94766 335 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 OAZ2O95190 189 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 ZBED1O96006 694 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 POMCP01189 267 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 GSTA2P09210 222 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 CHN1P15882 459 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms