RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 RAPGEF5Q92565 580 aa7.86□□□□□ -1.15
PTP4A1-206ENST00000627002 NDRG1Q92597 394 aaKnown RBP7.86□□□□□ -1.15
PTP4A1-206ENST00000627002 HSPH1Q92598 858 aa7.86□□□□□ -1.15
PTP4A1-206ENST00000627002 CLP1Q92989 425 aaKnown RBP7.86□□□□□ -1.15
PTP4A1-206ENST00000627002 MAGOHBQ96A72 148 aaKnown RBP7.86□□□□□ -1.15
PTP4A1-206ENST00000627002 PGAP3Q96FM1 320 aaPredicted RBP7.86□□□□□ -1.15
PTP4A1-206ENST00000627002 LRCH3Q96II8 777 aa7.86□□□□□ -1.15
PTP4A1-206ENST00000627002 PGLYRP2Q96PD5 576 aa7.86□□□□□ -1.15
PTP4A1-206ENST00000627002 PEBP4Q96S96 227 aa7.86□□□□□ -1.15
PTP4A1-206ENST00000627002 VN1R3Q9BXE9 311 aa7.86□□□□□ -1.15
PTP4A1-206ENST00000627002 MAK16Q9BXY0 300 aaKnown RBP7.86□□□□□ -1.15
PTP4A1-206ENST00000627002 FRMD8P1Q9BZ68 369 aaPredicted RBP7.86□□□□□ -1.15
PTP4A1-206ENST00000627002 LRRC19Q9H756 370 aa7.86□□□□□ -1.15
PTP4A1-206ENST00000627002 PRDM16Q9HAZ2 1276 aa7.86□□□□□ -1.15
PTP4A1-206ENST00000627002 ABCC13Q9NSE7 274 aa7.86□□□□□ -1.15
PTP4A1-206ENST00000627002 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.86□□□□□ -1.15
PTP4A1-206ENST00000627002 KLHL11Q9NVR0 708 aa7.86□□□□□ -1.15
PTP4A1-206ENST00000627002 IL37Q9NZH6 218 aa7.86□□□□□ -1.15
PTP4A1-206ENST00000627002 STIM2Q9P246 746 aa7.86□□□□□ -1.15
PTP4A1-206ENST00000627002 FNIP2Q9P278 1114 aa7.86□□□□□ -1.15
PTP4A1-206ENST00000627002 AFF4Q9UHB7 1163 aaKnown RBP7.86□□□□□ -1.15
PTP4A1-206ENST00000627002 PCYOX1Q9UHG3 505 aa7.86□□□□□ -1.15
PTP4A1-206ENST00000627002 RASAL2Q9UJF2 1139 aa7.86□□□□□ -1.15
PTP4A1-206ENST00000627002 RAB21Q9UL25 225 aa7.86□□□□□ -1.15
PTP4A1-206ENST00000627002 RWDD3Q9Y3V2 267 aa7.86□□□□□ -1.15
PTP4A1-206ENST00000627002 MICAL3Q7RTP6 2002 aa7.86□□□□□ -1.15
PTP4A1-206ENST00000627002 FAM92AA1XBS5 289 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 WDR27A2RRH5 827 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 CCDC151A5D8V7 595 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 M0QYT0 321 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 C2CD2LO14523 706 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 RAD51CO43502 376 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 TLL1O43897 1013 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 FGF18O76093 207 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 HEXIM1O94992 359 aaKnown RBP7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 FYNP06241 537 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 H2AFXP16104 143 aaPredicted RBP7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 ZFXP17010 805 aaPredicted RBP7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 SYN1P17600 705 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 TFE3P19532 575 aaPredicted RBP7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 YWHAQP27348 245 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 TNFRSF8P28908 595 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 BMP8BP34820 402 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 COILP38432 576 aaPredicted RBP7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 ARSEP51690 589 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 ZNF135P52742 658 aaPredicted RBP7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 RABGGTBP53611 331 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 EPHB4P54760 987 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 ROR1Q01973 937 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 LMNB2Q03252 620 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 RAB33AQ14088 237 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 TFDP2Q14188 446 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 SIX1Q15475 284 aaPredicted RBP7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 DPYSL2Q16555 572 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 CCNG2Q16589 344 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 DDR2Q16832 855 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 ARL13BQ3SXY8 428 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 KCNT1Q5JUK3 1230 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 SYPL2Q5VXT5 272 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 KAZNQ674X7 775 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 CCDC137Q6PK04 289 aaKnown RBP7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 DENND5BQ6ZUT9 1274 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 SYDE1Q6ZW31 735 aaPredicted RBP7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 RFX6Q8HWS3 928 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 CCDC105Q8IYK2 499 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 VPS52Q8N1B4 723 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 DEFB123Q8N688 67 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 EIF1ADQ8N9N8 165 aaKnown RBP7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 SCAMP5Q8TAC9 235 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 ZNF461Q8TAF7 563 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 FAM71BQ8TC56 605 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 RNF139Q8WU17 664 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 SLCO2A1Q92959 643 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 FBXO32Q969P5 355 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 NTAN1Q96AB6 310 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 HS3ST6Q96QI5 342 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 PNKPQ96T60 521 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 SEPT5Q99719 369 aaPredicted RBP7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 CLSTN3Q9BQT9 956 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 ZNF670Q9BS34 389 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 SNRNP25Q9BV90 132 aaKnown RBP7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 HEMGNQ9BXL5 484 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 CALN1Q9BXU9 219 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 DCLK3Q9C098 648 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 DDX47Q9H0S4 455 aaKnown RBP7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 RAB17Q9H0T7 212 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 EPC1Q9H2F5 836 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 FAM204AQ9H8W3 233 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 MRPL17Q9NRX2 175 aaKnown RBP7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 CXXC1Q9P0U4 656 aaPredicted RBP7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 RCOR3Q9P2K3 495 aaPredicted RBP7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 FZD10Q9ULW2 581 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 AP4E1Q9UPM8 1137 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 NAALADL1Q9UQQ1 740 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 LZTS1Q9Y250 596 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 UTP11Q9Y3A2 253 aaKnown RBP7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 NR2E1Q9Y466 385 aa7.85□□□□□ -1.15
PTP4A1-206ENST00000627002 TCRBV7S2A1N4TA0A589 114 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 C2orf72A6NCS6 295 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 SLC38A8A6NNN8 435 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms