RNA–Protein interactions for RNA: ENST00000626660.1

SQSTM1-216, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-216ENST00000626660 BEND5Q7L4P6 421 aa19.99■□□□□ 0.79
SQSTM1-216ENST00000626660 SLC26A9Q7LBE3 791 aa19.99■□□□□ 0.79
SQSTM1-216ENST00000626660 SLC44A3Q8N4M1 653 aa19.99■□□□□ 0.79
SQSTM1-216ENST00000626660 BPIFB1Q8TDL5 484 aa19.99■□□□□ 0.79
SQSTM1-216ENST00000626660 RPP25Q9BUL9 199 aaKnown RBP19.99■□□□□ 0.79
SQSTM1-216ENST00000626660 TRMT61BQ9BVS5 477 aaKnown RBP19.99■□□□□ 0.79
SQSTM1-216ENST00000626660 DEF6Q9H4E7 631 aa19.99■□□□□ 0.79
SQSTM1-216ENST00000626660 MARCH2Q9P0N8 246 aa19.99■□□□□ 0.79
SQSTM1-216ENST00000626660 ARHGAP20Q9P2F6 1191 aa19.99■□□□□ 0.79
SQSTM1-216ENST00000626660 SORCS3Q9UPU3 1222 aa19.99■□□□□ 0.79
SQSTM1-216ENST00000626660 LEFTY2O00292 366 aa19.98■□□□□ 0.79
SQSTM1-216ENST00000626660 MDM4O15151 490 aa19.98■□□□□ 0.79
SQSTM1-216ENST00000626660 PLEKP08567 350 aaPredicted RBP19.98■□□□□ 0.79
SQSTM1-216ENST00000626660 TCF3P15923 654 aa19.98■□□□□ 0.79
SQSTM1-216ENST00000626660 EIF4A3P38919 411 aaKnown RBP19.98■□□□□ 0.79
SQSTM1-216ENST00000626660 COG7P83436 770 aa19.98■□□□□ 0.79
SQSTM1-216ENST00000626660 USP4Q13107 963 aa19.98■□□□□ 0.79
SQSTM1-216ENST00000626660 GRM2Q14416 872 aa19.98■□□□□ 0.79
SQSTM1-216ENST00000626660 C2CD6Q53TS8 623 aa19.98■□□□□ 0.79
SQSTM1-216ENST00000626660 CC2D1AQ6P1N0 951 aaPredicted RBP19.98■□□□□ 0.79
SQSTM1-216ENST00000626660 WDR59Q6PJI9 974 aa19.98■□□□□ 0.79
SQSTM1-216ENST00000626660 MON1BQ7L1V2 547 aa19.98■□□□□ 0.79
SQSTM1-216ENST00000626660 MIB1Q86YT6 1006 aa19.98■□□□□ 0.79
SQSTM1-216ENST00000626660 TC2NQ8N9U0 490 aa19.98■□□□□ 0.79
SQSTM1-216ENST00000626660 OLIG1Q8TAK6 271 aa19.98■□□□□ 0.79
SQSTM1-216ENST00000626660 RSPRY1Q96DX4 576 aa19.98■□□□□ 0.79
SQSTM1-216ENST00000626660 PIWIL1Q96J94 861 aaKnown RBP19.98■□□□□ 0.79
SQSTM1-216ENST00000626660 PLA2G2FQ9BZM2 168 aa19.98■□□□□ 0.79
SQSTM1-216ENST00000626660 CFAP97Q9P2B7 532 aa19.98■□□□□ 0.79
SQSTM1-216ENST00000626660 IMPACTQ9P2X3 320 aa19.98■□□□□ 0.79
SQSTM1-216ENST00000626660 ADAMTS1Q9UHI8 967 aa19.98■□□□□ 0.79
SQSTM1-216ENST00000626660 SSU72P8A0A1W2PR75 194 aa19.97■□□□□ 0.79
SQSTM1-216ENST00000626660 RTN2O75298 545 aa19.97■□□□□ 0.79
SQSTM1-216ENST00000626660 ZNF77Q15935 545 aa19.97■□□□□ 0.79
SQSTM1-216ENST00000626660 ARHGAP29Q52LW3 1261 aa19.97■□□□□ 0.79
SQSTM1-216ENST00000626660 MSANTD2Q6P1R3 559 aa19.97■□□□□ 0.79
SQSTM1-216ENST00000626660 MCOLN2Q8IZK6 566 aa19.97■□□□□ 0.79
SQSTM1-216ENST00000626660 SPC24Q8NBT2 197 aa19.97■□□□□ 0.79
SQSTM1-216ENST00000626660 VCPIP1Q96JH7 1222 aa19.97■□□□□ 0.79
SQSTM1-216ENST00000626660 KLF16Q9BXK1 252 aaPredicted RBP19.97■□□□□ 0.79
SQSTM1-216ENST00000626660 TAS2R14Q9NYV8 317 aa19.97■□□□□ 0.79
SQSTM1-216ENST00000626660 SH3BP1Q9Y3L3 701 aa19.97■□□□□ 0.79
SQSTM1-216ENST00000626660 BDP1A6H8Y1 2624 aa19.96■□□□□ 0.79
SQSTM1-216ENST00000626660 SLC12A8A0AV02 714 aa19.96■□□□□ 0.79
SQSTM1-216ENST00000626660 ZNF263O14978 683 aa19.96■□□□□ 0.79
SQSTM1-216ENST00000626660 DAB1O75553 588 aa19.96■□□□□ 0.79
SQSTM1-216ENST00000626660 GRAP2O75791 330 aa19.96■□□□□ 0.79
SQSTM1-216ENST00000626660 FTLP02792 175 aaPredicted RBP19.96■□□□□ 0.79
SQSTM1-216ENST00000626660 IRF1P10914 325 aa19.96■□□□□ 0.79
SQSTM1-216ENST00000626660 KPNA1P52294 538 aaPredicted RBP19.96■□□□□ 0.79
SQSTM1-216ENST00000626660 RNASE9P60153 205 aaKnown RBP19.96■□□□□ 0.79
SQSTM1-216ENST00000626660 CDK17Q00537 523 aa19.96■□□□□ 0.79
SQSTM1-216ENST00000626660 FCHO2Q0JRZ9 810 aa19.96■□□□□ 0.79
SQSTM1-216ENST00000626660 PTP4A2Q12974 167 aa19.96■□□□□ 0.79
SQSTM1-216ENST00000626660 MAPK8IP2Q13387 824 aaPredicted RBP19.96■□□□□ 0.79
SQSTM1-216ENST00000626660 MTF1Q14872 753 aa19.96■□□□□ 0.79
SQSTM1-216ENST00000626660 TAF5Q15542 800 aa19.96■□□□□ 0.79
SQSTM1-216ENST00000626660 DCAF6Q58WW2 860 aa19.96■□□□□ 0.79
SQSTM1-216ENST00000626660 TRIM11Q96F44 468 aa19.96■□□□□ 0.79
SQSTM1-216ENST00000626660 ZFRQ96KR1 1074 aaKnown RBP19.96■□□□□ 0.79
SQSTM1-216ENST00000626660 CCDC42Q96M95 316 aa19.96■□□□□ 0.79
SQSTM1-216ENST00000626660 SLC2A13Q96QE2 648 aa19.96■□□□□ 0.79
SQSTM1-216ENST00000626660 PANX2Q96RD6 677 aa19.96■□□□□ 0.79
SQSTM1-216ENST00000626660 BRD9Q9H8M2 597 aa19.96■□□□□ 0.79
SQSTM1-216ENST00000626660 GKN1Q9NS71 199 aa19.96■□□□□ 0.79
SQSTM1-216ENST00000626660 MUTYHQ9UIF7 546 aa19.96■□□□□ 0.79
SQSTM1-216ENST00000626660 LSM7Q9UK45 103 aaKnown RBP19.96■□□□□ 0.79
SQSTM1-216ENST00000626660 NAALADL1Q9UQQ1 740 aa19.96■□□□□ 0.79
SQSTM1-216ENST00000626660 HBS1LQ9Y450 684 aaKnown RBP19.96■□□□□ 0.79
SQSTM1-216ENST00000626660 E2F8A0AVK6 867 aa19.95■□□□□ 0.78
SQSTM1-216ENST00000626660 SLC9A3R1O14745 358 aaPredicted RBP19.95■□□□□ 0.78
SQSTM1-216ENST00000626660 AKR1B10O60218 316 aa19.95■□□□□ 0.78
SQSTM1-216ENST00000626660 FYNP06241 537 aa19.95■□□□□ 0.78
SQSTM1-216ENST00000626660 SRFP11831 508 aa19.95■□□□□ 0.78
SQSTM1-216ENST00000626660 GDI1P31150 447 aa19.95■□□□□ 0.78
SQSTM1-216ENST00000626660 GSCP56915 257 aaPredicted RBP19.95■□□□□ 0.78
SQSTM1-216ENST00000626660 TMEM31Q5JXX7 168 aa19.95■□□□□ 0.78
SQSTM1-216ENST00000626660 DNAJC24Q6P3W2 148 aa19.95■□□□□ 0.78
SQSTM1-216ENST00000626660 PHLDB2Q86SQ0 1253 aa19.95■□□□□ 0.78
SQSTM1-216ENST00000626660 UBALD2Q8IYN6 164 aa19.95■□□□□ 0.78
SQSTM1-216ENST00000626660 DEFB106AQ8N104 65 aa19.95■□□□□ 0.78
SQSTM1-216ENST00000626660 KIAA1958Q8N8K9 716 aa19.95■□□□□ 0.78
SQSTM1-216ENST00000626660 DQX1Q8TE96 717 aaKnown RBP19.95■□□□□ 0.78
SQSTM1-216ENST00000626660 SERPINB11Q96P15 392 aa19.95■□□□□ 0.78
SQSTM1-216ENST00000626660 LRRC3BQ96PB8 259 aa19.95■□□□□ 0.78
SQSTM1-216ENST00000626660 SELENOOQ9BVL4 669 aa19.95■□□□□ 0.78
SQSTM1-216ENST00000626660 SMOC2Q9H3U7 446 aa19.95■□□□□ 0.78
SQSTM1-216ENST00000626660 RRN3Q9NYV6 651 aa19.95■□□□□ 0.78
SQSTM1-216ENST00000626660 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.95■□□□□ 0.782e-11■■■□□ 19.1
SQSTM1-216ENST00000626660 DUSP12Q9UNI6 340 aa19.95■□□□□ 0.78
SQSTM1-216ENST00000626660 KIF26AQ9ULI4 1882 aaPredicted RBP19.94■□□□□ 0.78
SQSTM1-216ENST00000626660 A0A087X0T9 212 aa19.94■□□□□ 0.78
SQSTM1-216ENST00000626660 ANKRD62A6NC57 917 aa19.94■□□□□ 0.78
SQSTM1-216ENST00000626660 CHADO15335 359 aa19.94■□□□□ 0.78
SQSTM1-216ENST00000626660 FAM228BP0C875 321 aa19.94■□□□□ 0.78
SQSTM1-216ENST00000626660 MYBL1P10243 752 aa19.94■□□□□ 0.78
SQSTM1-216ENST00000626660 NOS2P35228 1153 aa19.94■□□□□ 0.78
SQSTM1-216ENST00000626660 MATKP42679 507 aa19.94■□□□□ 0.78
SQSTM1-216ENST00000626660 IFNAR2P48551 515 aa19.94■□□□□ 0.78
SQSTM1-216ENST00000626660 MRE11P49959 708 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms