RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 PPP1R10Q96QC0 940 aaKnown RBP3.96□□□□□ -1.78
VBP1-204ENST00000625964 SNX18Q96RF0 628 aa3.96□□□□□ -1.78
VBP1-204ENST00000625964 NAA15Q9BXJ9 866 aaKnown RBP3.96□□□□□ -1.78
VBP1-204ENST00000625964 ZCWPW1Q9H0M4 648 aa3.96□□□□□ -1.78
VBP1-204ENST00000625964 SLC25A32Q9H2D1 315 aa3.96□□□□□ -1.78
VBP1-204ENST00000625964 ANO9A1A5B4 782 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 TISP43B9A030 160 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 H7C1Q1 480 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 M0R3H8 397 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 APOL1O14791 398 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 MYL1P05976 194 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 CD19P15391 556 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 FGFR2P21802 821 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 DIO1P49895 249 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 BEND5Q7L4P6 421 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 CHSY1Q86X52 802 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 SFTPA1Q8IWL2 248 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 FSTL5Q8N475 847 aaPredicted RBP3.95□□□□□ -1.78
VBP1-204ENST00000625964 METTL25Q8N6Q8 603 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 PARD3BQ8TEW8 1205 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 SH2D3AQ9BRG2 576 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 MAGEB5Q9BZ81 275 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 TRIM36Q9NQ86 728 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 GJB4Q9NTQ9 266 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 NKX1-2Q9UD57 310 aaPredicted RBP3.95□□□□□ -1.78
VBP1-204ENST00000625964 STEAP1Q9UHE8 339 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 VPS51Q9UID3 782 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 CAPN11Q9UMQ6 739 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 SLC27A6Q9Y2P4 619 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 A0A1W2PPC4 97 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 CLCA1A8K7I4 914 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 KCNU1A8MYU2 1149 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 TMPRSS11DO60235 418 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 GCATO75600 419 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 OAZ2O95190 189 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 ATICP31939 592 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 COPB1P53618 953 aaKnown RBP3.95□□□□□ -1.78
VBP1-204ENST00000625964 LMAN2Q12907 356 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 PMS2P11Q13670 270 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 ST3GAL2Q16842 350 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 CERKLQ49MI3 558 aaPredicted RBP3.95□□□□□ -1.78
VBP1-204ENST00000625964 CRTC1Q6UUV9 634 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 USP49Q70CQ1 688 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 KRT28Q7Z3Y7 464 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 BCDIN3DQ7Z5W3 292 aaKnown RBP3.95□□□□□ -1.78
VBP1-204ENST00000625964 RNF152Q8N8N0 203 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 CCDC150Q8NCX0 1101 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 NGDNQ8NEJ9 315 aaKnown RBP3.95□□□□□ -1.78
VBP1-204ENST00000625964 CTHRC1Q96CG8 243 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 RITA1Q96K30 269 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 FAM227BQ96M60 508 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 ASB2Q96Q27 587 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 ARNT2Q9HBZ2 717 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 STARD7Q9NQZ5 370 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 MYO1AQ9UBC5 1043 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 MGAT4CQ9UBM8 478 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 AFG3L2Q9Y4W6 797 aa3.95□□□□□ -1.78
VBP1-204ENST00000625964 A0A087WZ62 844 aa3.94□□□□□ -1.78
VBP1-204ENST00000625964 SMIM35A0A1B0GVV1 85 aa3.94□□□□□ -1.78
VBP1-204ENST00000625964 PRRT4C9JH25 899 aa3.94□□□□□ -1.78
VBP1-204ENST00000625964 POC1B-GALNT4F8VUJ3 575 aa3.94□□□□□ -1.78
VBP1-204ENST00000625964 UBE2Q2LH0YL09 131 aa3.94□□□□□ -1.78
VBP1-204ENST00000625964 AREL1O15033 823 aa3.94□□□□□ -1.78
VBP1-204ENST00000625964 USP1O94782 785 aa3.94□□□□□ -1.78
VBP1-204ENST00000625964 HMGB1P09429 215 aaKnown RBP3.94□□□□□ -1.78
VBP1-204ENST00000625964 MYL4P12829 197 aa3.94□□□□□ -1.78
VBP1-204ENST00000625964 TNFSF4P23510 183 aa3.94□□□□□ -1.78
VBP1-204ENST00000625964 NEK3P51956 506 aa3.94□□□□□ -1.78
VBP1-204ENST00000625964 EIF4A1P60842 406 aaKnown RBP3.94□□□□□ -1.78
VBP1-204ENST00000625964 GPS1Q13098 491 aa3.94□□□□□ -1.78
VBP1-204ENST00000625964 PICALMQ13492 652 aa3.94□□□□□ -1.78
VBP1-204ENST00000625964 DAZAP2Q15038 168 aaPredicted RBP3.94□□□□□ -1.78
VBP1-204ENST00000625964 CCDC181Q5TID7 509 aa3.94□□□□□ -1.78
VBP1-204ENST00000625964 IL31Q6EBC2 164 aa3.94□□□□□ -1.78
VBP1-204ENST00000625964 CATSPERGQ6ZRH7 1159 aa3.94□□□□□ -1.78
VBP1-204ENST00000625964 Q6ZTC4 211 aa3.94□□□□□ -1.78
VBP1-204ENST00000625964 USP43Q70EL4 1123 aa3.94□□□□□ -1.78
VBP1-204ENST00000625964 C11orf96Q7Z7L8 435 aa3.94□□□□□ -1.78
VBP1-204ENST00000625964 TXLNBQ8N3L3 684 aa3.94□□□□□ -1.78
VBP1-204ENST00000625964 GALNT4Q8N4A0 578 aa3.94□□□□□ -1.78
VBP1-204ENST00000625964 PRSS3P2Q8NHM4 247 aa3.94□□□□□ -1.78
VBP1-204ENST00000625964 MBD3L2Q8NHZ7 208 aaPredicted RBP3.94□□□□□ -1.78
VBP1-204ENST00000625964 ZDHHC12Q96GR4 267 aa3.94□□□□□ -1.78
VBP1-204ENST00000625964 VPS50Q96JG6 964 aa3.94□□□□□ -1.78
VBP1-204ENST00000625964 ZC3H10Q96K80 434 aaKnown RBP3.94□□□□□ -1.78
VBP1-204ENST00000625964 LYZL4Q96KX0 146 aa3.94□□□□□ -1.78
VBP1-204ENST00000625964 HS6ST2Q96MM7 605 aa3.94□□□□□ -1.78
VBP1-204ENST00000625964 FYTTD1Q96QD9 318 aaKnown RBP3.94□□□□□ -1.78
VBP1-204ENST00000625964 SELENOOQ9BVL4 669 aa3.94□□□□□ -1.78
VBP1-204ENST00000625964 COLEC11Q9BWP8 271 aa3.94□□□□□ -1.78
VBP1-204ENST00000625964 ASIC5Q9NY37 505 aa3.94□□□□□ -1.78
VBP1-204ENST00000625964 A8MVJ9 347 aa3.93□□□□□ -1.78
VBP1-204ENST00000625964 RASA4BC9J798 803 aa3.93□□□□□ -1.78
VBP1-204ENST00000625964 ADAMTS3O15072 1205 aa3.93□□□□□ -1.78
VBP1-204ENST00000625964 RASA4O43374 803 aa3.93□□□□□ -1.78
VBP1-204ENST00000625964 NCK2O43639 380 aa3.93□□□□□ -1.78
VBP1-204ENST00000625964 COQ9O75208 318 aa3.93□□□□□ -1.78
VBP1-204ENST00000625964 CHRM5P08912 532 aaPredicted RBP3.93□□□□□ -1.78
VBP1-204ENST00000625964 TMEM191BP0C7N4 346 aa3.93□□□□□ -1.78
VBP1-204ENST00000625964 TMEM225BP0DP42 221 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms