RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 DTWD2Q8NBA8 298 aa6.79□□□□□ -1.32
TCF4-249ENST00000625716 B3GALNT2Q8NCR0 500 aa6.79□□□□□ -1.32
TCF4-249ENST00000625716 FBXL13Q8NEE6 735 aa6.79□□□□□ -1.32
TCF4-249ENST00000625716 TTC16Q8NEE8 873 aa6.79□□□□□ -1.32
TCF4-249ENST00000625716 PRSS33Q8NF86 280 aa6.79□□□□□ -1.32
TCF4-249ENST00000625716 PJA1Q8NG27 643 aa6.79□□□□□ -1.32
TCF4-249ENST00000625716 BPIFB1Q8TDL5 484 aa6.79□□□□□ -1.32
TCF4-249ENST00000625716 WFDC12Q8WWY7 111 aa6.79□□□□□ -1.32
TCF4-249ENST00000625716 TP53INP1Q96A56 240 aa6.79□□□□□ -1.32
TCF4-249ENST00000625716 TRMT2BQ96GJ1 504 aaKnown RBP6.79□□□□□ -1.32
TCF4-249ENST00000625716 DHTKD1Q96HY7 919 aaPredicted RBP6.79□□□□□ -1.32
TCF4-249ENST00000625716 C8orf48Q96LL4 319 aa6.79□□□□□ -1.32
TCF4-249ENST00000625716 MYRFLQ96LU7 910 aa6.79□□□□□ -1.32
TCF4-249ENST00000625716 PKMYT1Q99640 499 aa6.79□□□□□ -1.32
TCF4-249ENST00000625716 SLC46A2Q9BY10 475 aa6.79□□□□□ -1.32
TCF4-249ENST00000625716 OSBPL6Q9BZF3 934 aa6.79□□□□□ -1.32
TCF4-249ENST00000625716 GZF1Q9H116 711 aaPredicted RBP6.79□□□□□ -1.32
TCF4-249ENST00000625716 SMYD3Q9H7B4 428 aa6.79□□□□□ -1.32
TCF4-249ENST00000625716 KIF9Q9HAQ2 790 aa6.79□□□□□ -1.32
TCF4-249ENST00000625716 TMEM8AQ9HCN3 771 aa6.79□□□□□ -1.32
TCF4-249ENST00000625716 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.79□□□□□ -1.324e-6■■■■■ 111.8
TCF4-249ENST00000625716 TDP1Q9NUW8 608 aa6.79□□□□□ -1.32
TCF4-249ENST00000625716 OBP2AQ9NY56 170 aa6.79□□□□□ -1.32
TCF4-249ENST00000625716 TRPM5Q9NZQ8 1165 aa6.79□□□□□ -1.32
TCF4-249ENST00000625716 TECTAO75443 2155 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 TCHHQ07283 1943 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 SCN1AP35498 2009 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 F8VP50 259 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 BIN1O00499 593 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 PRMT3O60678 531 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 MMP20O60882 483 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 GADD45BO75293 160 aaPredicted RBP6.78□□□□□ -1.32
TCF4-249ENST00000625716 RTN3O95197 1032 aaPredicted RBP6.78□□□□□ -1.32
TCF4-249ENST00000625716 ASS1P00966 412 aaKnown RBP6.78□□□□□ -1.32
TCF4-249ENST00000625716 CKMP06732 381 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 HDCP19113 662 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 CD72P21854 359 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 CCNE1P24864 410 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 YWHAQP27348 245 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 NOS3P29474 1203 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 MXI1P50539 228 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 NDST1P52848 882 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 NOP14P78316 857 aaKnown RBP6.78□□□□□ -1.32
TCF4-249ENST00000625716 AMPD2Q01433 879 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 PPP3CAQ08209 521 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 FCHO2Q0JRZ9 810 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 CETN1Q12798 172 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 TCF15Q12870 199 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 IFRD2Q12894 506 aaPredicted RBP6.78□□□□□ -1.32
TCF4-249ENST00000625716 TRIP4Q15650 581 aaPredicted RBP6.78□□□□□ -1.32
TCF4-249ENST00000625716 CCDC142Q17RM4 750 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 CCDC40Q4G0X9 1142 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 ZCWPW2Q504Y3 356 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 ARTNQ5T4W7 220 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 ANKRD40Q6AI12 368 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 SPOPLQ6IQ16 392 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 KLHL10Q6JEL2 608 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 ACOT1Q86TX2 421 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 WFDC8Q8IUA0 241 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 NUP93Q8N1F7 819 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 TTC39CQ8N584 583 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 STKLD1Q8NE28 680 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 SPATA20Q8TB22 786 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 TAS1R2Q8TE23 839 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 FAM3CQ92520 227 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 EXOC4Q96A65 974 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 ELMO3Q96BJ8 720 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 EEF2KMTQ96G04 330 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 SMARCD1Q96GM5 515 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 MSANTD3Q96H12 275 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 SLITRK1Q96PX8 696 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 NT5C1AQ9BXI3 368 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 B3GNT5Q9BYG0 378 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 FOXQ1Q9C009 403 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 NIF3L1Q9GZT8 377 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 DPEP3Q9H4B8 488 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 C8orf33Q9H7E9 229 aaPredicted RBP6.78□□□□□ -1.32
TCF4-249ENST00000625716 CYP3A43Q9HB55 503 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 METTL14Q9HCE5 456 aaKnown RBP6.78□□□□□ -1.32
TCF4-249ENST00000625716 TRPV5Q9NQA5 729 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 SPATA6Q9NWH7 488 aaPredicted RBP6.78□□□□□ -1.32
TCF4-249ENST00000625716 RAB20Q9NX57 234 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 ARMCX3Q9UH62 379 aaPredicted RBP6.78□□□□□ -1.32
TCF4-249ENST00000625716 MAN1B1Q9UKM7 699 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 NDRG2Q9UN36 371 aaKnown RBP6.78□□□□□ -1.32
TCF4-249ENST00000625716 PIAS3Q9Y6X2 628 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 TSC2P49815 1807 aa6.78□□□□□ -1.32
TCF4-249ENST00000625716 MUC3AQ02505 3323 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 MYO10Q9HD67 2058 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 TRIM49BA6NDI0 452 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 CLDN5O00501 218 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 TNFRSF10BO14763 440 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 LAMTOR5O43504 91 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 PRAMEF12O95522 483 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 FGFR1OPO95684 399 aaKnown RBP6.77□□□□□ -1.33
TCF4-249ENST00000625716 PFKLP17858 780 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 CD58P19256 250 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 ASPAP45381 313 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 IFNAR2P48551 515 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 MLLT6P55198 1093 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms