RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 PRDM16Q9HAZ2 1276 aa15.52■□□□□ 0.08
PNKP-218ENST00000625299 AGPAT3Q9NRZ7 376 aa15.52■□□□□ 0.08
PNKP-218ENST00000625299 CER1O95813 267 aa15.51■□□□□ 0.07
PNKP-218ENST00000625299 CCDC130P13994 396 aa15.51■□□□□ 0.07
PNKP-218ENST00000625299 HOXD13P35453 343 aa15.51■□□□□ 0.07
PNKP-218ENST00000625299 MATKP42679 507 aa15.51■□□□□ 0.07
PNKP-218ENST00000625299 ORC1Q13415 861 aa15.51■□□□□ 0.07
PNKP-218ENST00000625299 BIRC3Q13489 604 aa15.51■□□□□ 0.07
PNKP-218ENST00000625299 ZNF699Q32M78 642 aa15.51■□□□□ 0.07
PNKP-218ENST00000625299 FUT11Q495W5 492 aa15.51■□□□□ 0.07
PNKP-218ENST00000625299 DCAF12L1Q5VU92 463 aa15.51■□□□□ 0.07
PNKP-218ENST00000625299 FAM173BQ6P4H8 233 aa15.51■□□□□ 0.07
PNKP-218ENST00000625299 ACOT1Q86TX2 421 aa15.51■□□□□ 0.07
PNKP-218ENST00000625299 NELFCDQ8IXH7 590 aa15.51■□□□□ 0.07
PNKP-218ENST00000625299 JAKMIP2Q96AA8 810 aa15.51■□□□□ 0.07
PNKP-218ENST00000625299 TNIP3Q96KP6 325 aa15.51■□□□□ 0.07
PNKP-218ENST00000625299 KLF16Q9BXK1 252 aaPredicted RBP15.51■□□□□ 0.07
PNKP-218ENST00000625299 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.51■□□□□ 0.07
PNKP-218ENST00000625299 TLR8Q9NR97 1041 aaKnown RBP15.51■□□□□ 0.07
PNKP-218ENST00000625299 TM7SF3Q9NS93 570 aa15.51■□□□□ 0.07
PNKP-218ENST00000625299 WSB2Q9NYS7 404 aaPredicted RBP15.51■□□□□ 0.07
PNKP-218ENST00000625299 MARK1Q9P0L2 795 aa15.51■□□□□ 0.07
PNKP-218ENST00000625299 FNDC3AQ9Y2H6 1198 aaKnown RBP15.51■□□□□ 0.07
PNKP-218ENST00000625299 STON1Q9Y6Q2 735 aa15.51■□□□□ 0.07
PNKP-218ENST00000625299 GOLGA4Q13439 2230 aaKnown RBP15.5■□□□□ 0.07
PNKP-218ENST00000625299 MDM4O15151 490 aa15.5■□□□□ 0.07
PNKP-218ENST00000625299 GREM1O60565 184 aa15.5■□□□□ 0.07
PNKP-218ENST00000625299 CILPO75339 1184 aa15.5■□□□□ 0.07
PNKP-218ENST00000625299 BEST1O76090 585 aa15.5■□□□□ 0.07
PNKP-218ENST00000625299 ATICP31939 592 aa15.5■□□□□ 0.07
PNKP-218ENST00000625299 ATP5C1P36542 298 aaKnown RBP15.5■□□□□ 0.07
PNKP-218ENST00000625299 MAP3K7CLP57077 242 aa15.5■□□□□ 0.07
PNKP-218ENST00000625299 ASIC1P78348 528 aa15.5■□□□□ 0.07
PNKP-218ENST00000625299 CCDC157Q569K6 752 aa15.5■□□□□ 0.07
PNKP-218ENST00000625299 GLRX5Q86SX6 157 aa15.5■□□□□ 0.07
PNKP-218ENST00000625299 FUKQ8N0W3 1084 aa15.5■□□□□ 0.07
PNKP-218ENST00000625299 XXYLT1Q8NBI6 393 aa15.5■□□□□ 0.07
PNKP-218ENST00000625299 DNASE2BQ8WZ79 361 aa15.5■□□□□ 0.07
PNKP-218ENST00000625299 SNX19Q92543 992 aa15.5■□□□□ 0.07
PNKP-218ENST00000625299 ZNF516Q92618 1163 aa15.5■□□□□ 0.07
PNKP-218ENST00000625299 SMOQ99835 787 aa15.5■□□□□ 0.07
PNKP-218ENST00000625299 XYLT2Q9H1B5 865 aa15.5■□□□□ 0.07
PNKP-218ENST00000625299 FBXO44Q9H4M3 255 aa15.5■□□□□ 0.07
PNKP-218ENST00000625299 COMMD8Q9NX08 183 aa15.5■□□□□ 0.07
PNKP-218ENST00000625299 IL37Q9NZH6 218 aa15.5■□□□□ 0.07
PNKP-218ENST00000625299 NUDT5Q9UKK9 219 aa15.5■□□□□ 0.07
PNKP-218ENST00000625299 URB1O60287 2271 aaKnown RBP15.5■□□□□ 0.07
PNKP-218ENST00000625299 FAM92AA1XBS5 289 aa15.49■□□□□ 0.07
PNKP-218ENST00000625299 KCNJ18B7U540 433 aa15.49■□□□□ 0.07
PNKP-218ENST00000625299 GFRA2O00451 464 aa15.49■□□□□ 0.07
PNKP-218ENST00000625299 EIF3DO15371 548 aaKnown RBP eCLIP15.49■□□□□ 0.07
PNKP-218ENST00000625299 BCAT2O15382 392 aaPredicted RBP15.49■□□□□ 0.07
PNKP-218ENST00000625299 CYP26A1O43174 497 aa15.49■□□□□ 0.07
PNKP-218ENST00000625299 STAU1O95793 577 aaKnown RBP15.49■□□□□ 0.07
PNKP-218ENST00000625299 CISD3P0C7P0 127 aa15.49■□□□□ 0.07
PNKP-218ENST00000625299 ATXN1LP0C7T5 689 aaKnown RBP15.49■□□□□ 0.07
PNKP-218ENST00000625299 CASP4P49662 377 aa15.49■□□□□ 0.07
PNKP-218ENST00000625299 HLA-BQ31612 363 aa15.49■□□□□ 0.07
PNKP-218ENST00000625299 C8orf34Q49A92 452 aa15.49■□□□□ 0.07
PNKP-218ENST00000625299 ZNF667Q5HYK9 610 aa15.49■□□□□ 0.07
PNKP-218ENST00000625299 TMPRSS7Q7RTY8 843 aa15.49■□□□□ 0.07
PNKP-218ENST00000625299 ZMIZ2Q8NF64 920 aa15.49■□□□□ 0.07
PNKP-218ENST00000625299 SLC2A14Q8TDB8 520 aa15.49■□□□□ 0.07
PNKP-218ENST00000625299 RHBDD1Q8TEB9 315 aa15.49■□□□□ 0.07
PNKP-218ENST00000625299 MKRN2Q9H000 416 aaKnown RBP15.49■□□□□ 0.07
PNKP-218ENST00000625299 SDCBP2Q9H190 292 aa15.49■□□□□ 0.07
PNKP-218ENST00000625299 FAM49BQ9NUQ9 324 aa15.49■□□□□ 0.07
PNKP-218ENST00000625299 USP36Q9P275 1121 aaKnown RBP15.49■□□□□ 0.07
PNKP-218ENST00000625299 EIF2B4Q9UI10 523 aaKnown RBP15.49■□□□□ 0.07
PNKP-218ENST00000625299 BPTFQ12830 3046 aa15.48■□□□□ 0.07
PNKP-218ENST00000625299 A0A1B0GVT2 93 aa15.48■□□□□ 0.07
PNKP-218ENST00000625299 FAM149AA5PLN7 773 aa15.48■□□□□ 0.07
PNKP-218ENST00000625299 TGFB1I1O43294 461 aa15.48■□□□□ 0.07
PNKP-218ENST00000625299 SYNCRIPO60506 623 aaKnown RBP15.48■□□□□ 0.07
PNKP-218ENST00000625299 ADORA2BP29275 332 aa15.48■□□□□ 0.07
PNKP-218ENST00000625299 IL12RB1P42701 662 aa15.48■□□□□ 0.07
PNKP-218ENST00000625299 TPMTP51580 245 aa15.48■□□□□ 0.07
PNKP-218ENST00000625299 CYP4F3Q08477 520 aa15.48■□□□□ 0.07
PNKP-218ENST00000625299 IL27RAQ6UWB1 636 aa15.48■□□□□ 0.07
PNKP-218ENST00000625299 GPRIN1Q7Z2K8 1008 aa15.48■□□□□ 0.07
PNKP-218ENST00000625299 FAM124AQ86V42 546 aa15.48■□□□□ 0.07
PNKP-218ENST00000625299 TMPRSS6Q8IU80 811 aa15.48■□□□□ 0.07
PNKP-218ENST00000625299 CADM4Q8NFZ8 388 aa15.48■□□□□ 0.07
PNKP-218ENST00000625299 PRCCQ92733 491 aaPredicted RBP15.48■□□□□ 0.07
PNKP-218ENST00000625299 SIPA1Q96FS4 1042 aa15.48■□□□□ 0.07
PNKP-218ENST00000625299 CRELD1Q96HD1 420 aa15.48■□□□□ 0.07
PNKP-218ENST00000625299 GZF1Q9H116 711 aaPredicted RBP15.48■□□□□ 0.07
PNKP-218ENST00000625299 TNMDQ9H2S6 317 aa15.48■□□□□ 0.07
PNKP-218ENST00000625299 SCUBE2Q9NQ36 999 aa15.48■□□□□ 0.07
PNKP-218ENST00000625299 ITM2CQ9NQX7 267 aa15.48■□□□□ 0.07
PNKP-218ENST00000625299 OSER1Q9NX31 292 aa15.48■□□□□ 0.07
PNKP-218ENST00000625299 TOR4AQ9NXH8 423 aa15.48■□□□□ 0.07
PNKP-218ENST00000625299 KIAA1522Q9P206 1035 aaPredicted RBP15.48■□□□□ 0.07
PNKP-218ENST00000625299 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.48■□□□□ 0.073e-6■■■■□ 21.1
PNKP-218ENST00000625299 METTL12A8MUP2 240 aa15.47■□□□□ 0.07
PNKP-218ENST00000625299 FLRT2O43155 660 aa15.47■□□□□ 0.07
PNKP-218ENST00000625299 ZNF883P0CG24 379 aa15.47■□□□□ 0.07
PNKP-218ENST00000625299 ACADMP11310 421 aa15.47■□□□□ 0.07
PNKP-218ENST00000625299 OXTRP30559 389 aa15.47■□□□□ 0.07
PNKP-218ENST00000625299 BNC1Q01954 994 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms