RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 IL4RP24394 825 aa17■□□□□ 0.31
LDB3-208ENST00000623007 CYP2F1P24903 491 aa17■□□□□ 0.31
LDB3-208ENST00000623007 CYP2C18P33260 490 aa17■□□□□ 0.31
LDB3-208ENST00000623007 PHBP35232 272 aa17■□□□□ 0.31
LDB3-208ENST00000623007 HCAR3P49019 387 aa17■□□□□ 0.31
LDB3-208ENST00000623007 DEUP1Q05D60 604 aa17■□□□□ 0.31
LDB3-208ENST00000623007 SCAPQ12770 1279 aa17■□□□□ 0.31
LDB3-208ENST00000623007 PM20D1Q6GTS8 502 aa17■□□□□ 0.31
LDB3-208ENST00000623007 ABI1Q8IZP0 508 aa17■□□□□ 0.31
LDB3-208ENST00000623007 TLCD1Q96CP7 247 aa17■□□□□ 0.31
LDB3-208ENST00000623007 FUBP3Q96I24 572 aaKnown RBP eCLIP17■□□□□ 0.31
LDB3-208ENST00000623007 MRPL9Q9BYD2 267 aaKnown RBP17■□□□□ 0.31
LDB3-208ENST00000623007 AAASQ9NRG9 546 aa17■□□□□ 0.31
LDB3-208ENST00000623007 FETUBQ9UGM5 382 aa17■□□□□ 0.31
LDB3-208ENST00000623007 FZD10Q9ULW2 581 aa17■□□□□ 0.31
LDB3-208ENST00000623007 FARP1Q9Y4F1 1045 aaPredicted RBP17■□□□□ 0.31
LDB3-208ENST00000623007 TSC2P49815 1807 aa17■□□□□ 0.31
LDB3-208ENST00000623007 H7C0C1 242 aa16.99■□□□□ 0.31
LDB3-208ENST00000623007 CHADO15335 359 aa16.99■□□□□ 0.31
LDB3-208ENST00000623007 LTFP02788 710 aa16.99■□□□□ 0.31
LDB3-208ENST00000623007 MAGEA4P43358 317 aa16.99■□□□□ 0.31
LDB3-208ENST00000623007 ATP5OP48047 213 aa16.99■□□□□ 0.31
LDB3-208ENST00000623007 CTCFP49711 727 aaPredicted RBP16.99■□□□□ 0.31
LDB3-208ENST00000623007 AFF1P51825 1210 aaKnown RBP16.99■□□□□ 0.31
LDB3-208ENST00000623007 GYS2P54840 703 aa16.99■□□□□ 0.31
LDB3-208ENST00000623007 PPP2R2AP63151 447 aa16.99■□□□□ 0.31
LDB3-208ENST00000623007 RNASELQ05823 741 aaKnown RBP16.99■□□□□ 0.31
LDB3-208ENST00000623007 SMARCB1Q12824 385 aa16.99■□□□□ 0.31
LDB3-208ENST00000623007 ELAVL2Q12926 359 aaKnown RBP16.99■□□□□ 0.31
LDB3-208ENST00000623007 HIF1AQ16665 826 aa16.99■□□□□ 0.31
LDB3-208ENST00000623007 KCTD16Q68DU8 428 aa16.99■□□□□ 0.31
LDB3-208ENST00000623007 PDIK1LQ8N165 341 aa16.99■□□□□ 0.31
LDB3-208ENST00000623007 CLEC4CQ8WTT0 213 aa16.99■□□□□ 0.31
LDB3-208ENST00000623007 MYLPFQ96A32 169 aa16.99■□□□□ 0.31
LDB3-208ENST00000623007 SMOQ99835 787 aa16.99■□□□□ 0.31
LDB3-208ENST00000623007 LPIN3Q9BQK8 851 aa16.99■□□□□ 0.31
LDB3-208ENST00000623007 ULBP1Q9BZM6 244 aa16.99■□□□□ 0.31
LDB3-208ENST00000623007 KLC2Q9H0B6 622 aa16.99■□□□□ 0.31
LDB3-208ENST00000623007 BRD8Q9H0E9 1235 aa16.99■□□□□ 0.31
LDB3-208ENST00000623007 CWC15Q9P013 229 aaKnown RBP16.99■□□□□ 0.31
LDB3-208ENST00000623007 M0QYT0 321 aa16.98■□□□□ 0.31
LDB3-208ENST00000623007 CLDN5O00501 218 aa16.98■□□□□ 0.31
LDB3-208ENST00000623007 ALOX15BO15296 676 aa16.98■□□□□ 0.31
LDB3-208ENST00000623007 NCAM2O15394 837 aa16.98■□□□□ 0.31
LDB3-208ENST00000623007 CDH16O75309 829 aa16.98■□□□□ 0.31
LDB3-208ENST00000623007 SPAG6O75602 509 aa16.98■□□□□ 0.31
LDB3-208ENST00000623007 STK10O94804 968 aaKnown RBP16.98■□□□□ 0.31
LDB3-208ENST00000623007 OAZ2O95190 189 aa16.98■□□□□ 0.31
LDB3-208ENST00000623007 HTR7P34969 479 aa16.98■□□□□ 0.31
LDB3-208ENST00000623007 RASA2Q15283 850 aa16.98■□□□□ 0.31
LDB3-208ENST00000623007 PPP6R3Q5H9R7 873 aaPredicted RBP16.98■□□□□ 0.31
LDB3-208ENST00000623007 KIAA0319Q5VV43 1072 aa16.98■□□□□ 0.31
LDB3-208ENST00000623007 SPATA2LQ8IUW3 424 aaPredicted RBP16.98■□□□□ 0.31
LDB3-208ENST00000623007 FAM126BQ8IXS8 530 aa16.98■□□□□ 0.31
LDB3-208ENST00000623007 OR2W6PQ8NHA6 318 aa16.98■□□□□ 0.31
LDB3-208ENST00000623007 PCDH19Q8TAB3 1148 aa16.98■□□□□ 0.31
LDB3-208ENST00000623007 PRCCQ92733 491 aaPredicted RBP16.98■□□□□ 0.31
LDB3-208ENST00000623007 PKMYT1Q99640 499 aa16.98■□□□□ 0.31
LDB3-208ENST00000623007 FAM118BQ9BPY3 351 aa16.98■□□□□ 0.31
LDB3-208ENST00000623007 BCCIPQ9P287 314 aaKnown RBP eCLIP16.98■□□□□ 0.31
LDB3-208ENST00000623007 NOVA2Q9UNW9 492 aaKnown RBP16.98■□□□□ 0.31
LDB3-208ENST00000623007 PCDHB7Q9Y5E2 793 aa16.98■□□□□ 0.31
LDB3-208ENST00000623007 PECAM1P16284 738 aaPredicted RBP16.97■□□□□ 0.31
LDB3-208ENST00000623007 PLEKHG4Q58EX7 1191 aa16.97■□□□□ 0.31
LDB3-208ENST00000623007 VSTM1Q6UX27 236 aa16.97■□□□□ 0.31
LDB3-208ENST00000623007 COLGALT2Q8IYK4 626 aa16.97■□□□□ 0.31
LDB3-208ENST00000623007 PQLC3Q8N755 202 aa16.97■□□□□ 0.31
LDB3-208ENST00000623007 CSPG4P5Q96PW8 444 aa16.97■□□□□ 0.31
LDB3-208ENST00000623007 COLEC11Q9BWP8 271 aa16.97■□□□□ 0.31
LDB3-208ENST00000623007 CARNS1A5YM72 827 aa16.97■□□□□ 0.31
LDB3-208ENST00000623007 E7EVH7 732 aa16.97■□□□□ 0.31
LDB3-208ENST00000623007 BEST1O76090 585 aa16.97■□□□□ 0.31
LDB3-208ENST00000623007 RPL22P35268 128 aaKnown RBP16.97■□□□□ 0.31
LDB3-208ENST00000623007 CHKAP35790 457 aa16.97■□□□□ 0.31
LDB3-208ENST00000623007 MDH1P40925 334 aaKnown RBP16.97■□□□□ 0.31
LDB3-208ENST00000623007 MMRN1Q13201 1228 aa16.97■□□□□ 0.31
LDB3-208ENST00000623007 SLC45A4Q5BKX6 768 aa16.97■□□□□ 0.31
LDB3-208ENST00000623007 ZC3H12AQ5D1E8 599 aaKnown RBP16.97■□□□□ 0.31
LDB3-208ENST00000623007 CD300LGQ6UXG3 332 aa16.97■□□□□ 0.31
LDB3-208ENST00000623007 ARHGAP18Q8N392 663 aa16.97■□□□□ 0.31
LDB3-208ENST00000623007 NAT8LQ8N9F0 302 aa16.97■□□□□ 0.31
LDB3-208ENST00000623007 CENPTQ96BT3 561 aa16.97■□□□□ 0.31
LDB3-208ENST00000623007 RTP3Q9BQQ7 232 aa16.97■□□□□ 0.31
LDB3-208ENST00000623007 BEGAINQ9BUH8 593 aa16.97■□□□□ 0.31
LDB3-208ENST00000623007 PAK6Q9NQU5 681 aaPredicted RBP16.97■□□□□ 0.31
LDB3-208ENST00000623007 NINJ2Q9NZG7 142 aa16.97■□□□□ 0.31
LDB3-208ENST00000623007 TRIM17Q9Y577 477 aa16.97■□□□□ 0.31
LDB3-208ENST00000623007 TIMM13Q9Y5L4 95 aaPredicted RBP16.97■□□□□ 0.31
LDB3-208ENST00000623007 ACTL7BQ9Y614 415 aa16.97■□□□□ 0.31
LDB3-208ENST00000623007 USP3Q9Y6I4 520 aa16.97■□□□□ 0.31
LDB3-208ENST00000623007 HHLA1C9JL84 531 aa16.96■□□□□ 0.31
LDB3-208ENST00000623007 PPP1R12AO14974 1030 aaPredicted RBP16.96■□□□□ 0.31
LDB3-208ENST00000623007 TRIM66O15016 1216 aa16.96■□□□□ 0.31
LDB3-208ENST00000623007 ACSL3O95573 720 aa16.96■□□□□ 0.31
LDB3-208ENST00000623007 NCAM1P13591 858 aa16.96■□□□□ 0.31
LDB3-208ENST00000623007 BRCC3P46736 316 aa16.96■□□□□ 0.31
LDB3-208ENST00000623007 SARNPP82979 210 aaKnown RBP16.96■□□□□ 0.31
LDB3-208ENST00000623007 TNFAIP8L3Q5GJ75 292 aa16.96■□□□□ 0.31
LDB3-208ENST00000623007 RTN4RL1Q86UN2 441 aaPredicted RBP16.96■□□□□ 0.31
LDB3-208ENST00000623007 TDRPQ86YL5 185 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 161.1 ms