RNA–Protein interactions for RNA: ENST00000622698.4

PCDH11Y-207, Transcript of protocadherin 11 Y-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11Y, Length 4,824 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11Y-207ENST00000622698 FAM189BP81408 668 aa11.32□□□□□ -0.6
PCDH11Y-207ENST00000622698 PRPF38BQ5VTL8 546 aaKnown RBP11.32□□□□□ -0.6
PCDH11Y-207ENST00000622698 MFN1Q8IWA4 741 aa11.32□□□□□ -0.6
PCDH11Y-207ENST00000622698 FAF2Q96CS3 445 aa11.32□□□□□ -0.6
PCDH11Y-207ENST00000622698 DCUN1D1Q96GG9 259 aa11.32□□□□□ -0.6
PCDH11Y-207ENST00000622698 MRPL45Q9BRJ2 306 aaKnown RBP11.32□□□□□ -0.6
PCDH11Y-207ENST00000622698 DEC1Q9P2X7 70 aa11.32□□□□□ -0.6
PCDH11Y-207ENST00000622698 CCL16O15467 120 aa11.32□□□□□ -0.6
PCDH11Y-207ENST00000622698 CLDN11O75508 207 aa11.32□□□□□ -0.6
PCDH11Y-207ENST00000622698 MATKP42679 507 aa11.32□□□□□ -0.6
PCDH11Y-207ENST00000622698 EIF3EP60228 445 aaKnown RBP11.32□□□□□ -0.6
PCDH11Y-207ENST00000622698 APBA1Q02410 837 aa11.32□□□□□ -0.6
PCDH11Y-207ENST00000622698 SLC20A2Q08357 652 aa11.32□□□□□ -0.6
PCDH11Y-207ENST00000622698 DSC3Q14574 896 aa11.32□□□□□ -0.6
PCDH11Y-207ENST00000622698 TMED2Q15363 201 aa11.32□□□□□ -0.6
PCDH11Y-207ENST00000622698 EXD1Q8NHP7 514 aa11.32□□□□□ -0.6
PCDH11Y-207ENST00000622698 USP20Q9Y2K6 914 aa11.32□□□□□ -0.6
PCDH11Y-207ENST00000622698 VIMP08670 466 aaKnown RBP11.32□□□□□ -0.6
PCDH11Y-207ENST00000622698 BASP1P80723 227 aaKnown RBP11.32□□□□□ -0.6
PCDH11Y-207ENST00000622698 DSG1Q02413 1049 aa11.32□□□□□ -0.6
PCDH11Y-207ENST00000622698 UPP1Q16831 310 aa11.32□□□□□ -0.6
PCDH11Y-207ENST00000622698 SMG8Q8ND04 991 aaKnown RBP11.32□□□□□ -0.6
PCDH11Y-207ENST00000622698 TMEM174Q8WUU8 243 aa11.32□□□□□ -0.6
PCDH11Y-207ENST00000622698 ADGRE3Q9BY15 652 aa11.32□□□□□ -0.6
PCDH11Y-207ENST00000622698 CIPCQ9C0C6 399 aa11.32□□□□□ -0.6
PCDH11Y-207ENST00000622698 INSL5Q9Y5Q6 135 aa11.32□□□□□ -0.6
PCDH11Y-207ENST00000622698 TBC1D3BA6NDS4 549 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 ERICH4A6NGS2 130 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 FTCDO95954 541 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 GRSF1Q12849 480 aaKnown RBP eCLIP11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 DMC1Q14565 340 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 MARCH8Q5T0T0 291 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 PID1Q7Z2X4 250 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 SLC47A2Q86VL8 602 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 CALML6Q8TD86 181 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 SCG3Q8WXD2 468 aaKnown RBP11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 MSANTD3Q96H12 275 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 CFAP57Q96MR6 1250 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 CARD9Q9H257 536 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 BCAS3Q9H6U6 928 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 TRHDEQ9UKU6 1024 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 SIK3Q9Y2K2 1263 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 COL4A1P02462 1669 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 A6NNZ2 444 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 O00370 1275 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 ARL1P40616 181 aaPredicted RBP11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 ZNF143P52747 638 aaPredicted RBP11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 FAM193AP78312 1265 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 MGAT3Q09327 533 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 TAF10Q12962 218 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 CUL1Q13616 776 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 TUBB8Q3ZCM7 444 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 LGI2Q8N0V4 545 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 CCDC63Q8NA47 563 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 PPHLN1Q8NEY8 458 aaKnown RBP11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 RNF25Q96BH1 459 aaPredicted RBP11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 RMDN1Q96DB5 314 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 NSRP1Q9H0G5 558 aaKnown RBP11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 RSPH14Q9UHP6 348 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 MRFAP1Q9Y605 127 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 MAD1L1Q9Y6D9 718 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 MAGEC1O60732 1142 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 OAZ2O95190 189 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 VCLP18206 1134 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 PCK1P35558 622 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 RHOAP61586 193 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 DLG4P78352 724 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 KRT33BQ14525 404 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 TMEM240Q5SV17 173 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 COLGALT2Q8IYK4 626 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 CXorf38Q8TB03 319 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 EPS8L1Q8TE68 723 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 FNIP1Q8TF40 1166 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 CASKIN2Q8WXE0 1202 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 FUCA2Q9BTY2 467 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 PTPRHQ9HD43 1115 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 NKIRAS1Q9NYS0 192 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 SEPT3Q9UH03 358 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 USP18Q9UMW8 372 aa11.31□□□□□ -0.6
PCDH11Y-207ENST00000622698 TRIP4Q15650 581 aaPredicted RBP11.3□□□□□ -0.6
PCDH11Y-207ENST00000622698 AARS2Q5JTZ9 985 aaKnown RBP11.3□□□□□ -0.6
PCDH11Y-207ENST00000622698 DENND2CQ68D51 928 aa11.3□□□□□ -0.6
PCDH11Y-207ENST00000622698 GJB7Q6PEY0 223 aa11.3□□□□□ -0.6
PCDH11Y-207ENST00000622698 RAB44Q7Z6P3 723 aaPredicted RBP11.3□□□□□ -0.6
PCDH11Y-207ENST00000622698 CCNJLQ8IV13 435 aa11.3□□□□□ -0.6
PCDH11Y-207ENST00000622698 SUGP1Q8IWZ8 645 aaKnown RBP11.3□□□□□ -0.6
PCDH11Y-207ENST00000622698 TFB1MQ8WVM0 346 aaKnown RBP11.3□□□□□ -0.6
PCDH11Y-207ENST00000622698 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.3□□□□□ -0.6
PCDH11Y-207ENST00000622698 SPATA17Q96L03 361 aa11.3□□□□□ -0.6
PCDH11Y-207ENST00000622698 NELL2Q99435 816 aa11.3□□□□□ -0.6
PCDH11Y-207ENST00000622698 ZCWPW1Q9H0M4 648 aa11.3□□□□□ -0.6
PCDH11Y-207ENST00000622698 CERS4Q9HA82 394 aa11.3□□□□□ -0.6
PCDH11Y-207ENST00000622698 GRM6O15303 877 aa11.3□□□□□ -0.6
PCDH11Y-207ENST00000622698 DGKIO75912 1065 aa11.3□□□□□ -0.6
PCDH11Y-207ENST00000622698 STAMBPO95630 424 aa11.3□□□□□ -0.6
PCDH11Y-207ENST00000622698 FGGP02679 453 aa11.3□□□□□ -0.6
PCDH11Y-207ENST00000622698 CA3P07451 260 aa11.3□□□□□ -0.6
PCDH11Y-207ENST00000622698 ADSSP30520 456 aa11.3□□□□□ -0.6
PCDH11Y-207ENST00000622698 NCAPHQ15003 741 aa11.3□□□□□ -0.6
PCDH11Y-207ENST00000622698 FNDC3BQ53EP0 1204 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms