RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 UBXN11Q5T124 520 aa18.16■□□□□ 0.5
FAM3A-222ENST00000621967 CNKSR3Q6P9H4 555 aa18.16■□□□□ 0.5
FAM3A-222ENST00000621967 ADGRD1Q6QNK2 874 aa18.16■□□□□ 0.5
FAM3A-222ENST00000621967 FAM43BQ6ZT52 329 aaPredicted RBP18.16■□□□□ 0.5
FAM3A-222ENST00000621967 HACE1Q8IYU2 909 aa18.16■□□□□ 0.5
FAM3A-222ENST00000621967 KLHL29Q96CT2 875 aa18.16■□□□□ 0.5
FAM3A-222ENST00000621967 PAIP2Q9BPZ3 127 aaKnown RBP18.16■□□□□ 0.5
FAM3A-222ENST00000621967 MAK16Q9BXY0 300 aaKnown RBP18.16■□□□□ 0.5
FAM3A-222ENST00000621967 ELOVL4Q9GZR5 314 aa18.16■□□□□ 0.5
FAM3A-222ENST00000621967 ACSS3Q9H6R3 686 aa18.16■□□□□ 0.5
FAM3A-222ENST00000621967 SMYD3Q9H7B4 428 aa18.16■□□□□ 0.5
FAM3A-222ENST00000621967 PCDH10Q9P2E7 1040 aa18.16■□□□□ 0.5
FAM3A-222ENST00000621967 HMGXB4Q9UGU5 601 aa18.16■□□□□ 0.5
FAM3A-222ENST00000621967 BAIAP2L1Q9UHR4 511 aa18.16■□□□□ 0.5
FAM3A-222ENST00000621967 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.16■□□□□ 0.5
FAM3A-222ENST00000621967 A0A1W2PPM1 405 aa18.15■□□□□ 0.5
FAM3A-222ENST00000621967 GOLGA8MH3BSY2 632 aa18.15■□□□□ 0.5
FAM3A-222ENST00000621967 TMEM63AO94886 807 aa18.15■□□□□ 0.5
FAM3A-222ENST00000621967 PFKMP08237 780 aa18.15■□□□□ 0.5
FAM3A-222ENST00000621967 CA4P22748 312 aa18.15■□□□□ 0.5
FAM3A-222ENST00000621967 MIPP30301 263 aa18.15■□□□□ 0.5
FAM3A-222ENST00000621967 YARSP54577 528 aaKnown RBP18.15■□□□□ 0.5
FAM3A-222ENST00000621967 DNAJC3Q13217 504 aa18.15■□□□□ 0.5
FAM3A-222ENST00000621967 PYROXD1Q8WU10 500 aa18.15■□□□□ 0.5
FAM3A-222ENST00000621967 MZB1Q8WU39 189 aa18.15■□□□□ 0.5
FAM3A-222ENST00000621967 RSAD2Q8WXG1 361 aa18.15■□□□□ 0.5
FAM3A-222ENST00000621967 BADQ92934 168 aa18.15■□□□□ 0.5
FAM3A-222ENST00000621967 APOL6Q9BWW8 343 aa18.15■□□□□ 0.5
FAM3A-222ENST00000621967 NXF3Q9H4D5 531 aaKnown RBP18.15■□□□□ 0.5
FAM3A-222ENST00000621967 C10orf88Q9H8K7 445 aa18.15■□□□□ 0.5
FAM3A-222ENST00000621967 CYP3A43Q9HB55 503 aa18.15■□□□□ 0.5
FAM3A-222ENST00000621967 IPPQ9Y573 584 aa18.15■□□□□ 0.5
FAM3A-222ENST00000621967 MICAL2O94851 1124 aa18.15■□□□□ 0.5
FAM3A-222ENST00000621967 ENDOD1O94919 500 aa18.15■□□□□ 0.5
FAM3A-222ENST00000621967 TRUB2O95900 331 aaKnown RBP18.15■□□□□ 0.5
FAM3A-222ENST00000621967 STAG3L1P0CL83 205 aa18.15■□□□□ 0.5
FAM3A-222ENST00000621967 SSTR1P30872 391 aa18.15■□□□□ 0.5
FAM3A-222ENST00000621967 ATICP31939 592 aa18.15■□□□□ 0.5
FAM3A-222ENST00000621967 PCK1P35558 622 aa18.15■□□□□ 0.5
FAM3A-222ENST00000621967 GRM5P41594 1212 aa18.15■□□□□ 0.5
FAM3A-222ENST00000621967 GPD2P43304 727 aa18.15■□□□□ 0.5
FAM3A-222ENST00000621967 FPGSQ05932 587 aa18.15■□□□□ 0.5
FAM3A-222ENST00000621967 PPIGQ13427 754 aaKnown RBP eCLIP18.15■□□□□ 0.52e-6■■■■□ 20.9
FAM3A-222ENST00000621967 KLHL38Q2WGJ6 581 aa18.15■□□□□ 0.5
FAM3A-222ENST00000621967 UNC45BQ8IWX7 931 aa18.15■□□□□ 0.5
FAM3A-222ENST00000621967 SPOCK2Q92563 424 aa18.15■□□□□ 0.5
FAM3A-222ENST00000621967 TMEM176AQ96HP8 235 aa18.15■□□□□ 0.5
FAM3A-222ENST00000621967 TSPYL2Q9H2G4 693 aaPredicted RBP18.15■□□□□ 0.5
FAM3A-222ENST00000621967 RGS18Q9NS28 235 aa18.15■□□□□ 0.5
FAM3A-222ENST00000621967 HES2Q9Y543 173 aa18.15■□□□□ 0.5
FAM3A-222ENST00000621967 NR2E3Q9Y5X4 410 aa18.15■□□□□ 0.5
FAM3A-222ENST00000621967 USH1CQ9Y6N9 552 aa18.15■□□□□ 0.5
FAM3A-222ENST00000621967 LACTBL1A8MY62 500 aa18.14■□□□□ 0.49
FAM3A-222ENST00000621967 UNC5CO95185 931 aa18.14■□□□□ 0.49
FAM3A-222ENST00000621967 ZWINTO95229 277 aa18.14■□□□□ 0.49
FAM3A-222ENST00000621967 ITGB3P05106 788 aa18.14■□□□□ 0.49
FAM3A-222ENST00000621967 SKIP12755 728 aa18.14■□□□□ 0.49
FAM3A-222ENST00000621967 IKBKEQ14164 716 aa18.14■□□□□ 0.49
FAM3A-222ENST00000621967 JADE1Q6IE81 842 aa18.14■□□□□ 0.49
FAM3A-222ENST00000621967 SLC24A5Q71RS6 500 aa18.14■□□□□ 0.49
FAM3A-222ENST00000621967 RFX6Q8HWS3 928 aa18.14■□□□□ 0.49
FAM3A-222ENST00000621967 LRRC8CQ8TDW0 803 aa18.14■□□□□ 0.49
FAM3A-222ENST00000621967 LINC01599Q8WXQ3 324 aa18.14■□□□□ 0.49
FAM3A-222ENST00000621967 ACAP3Q96P50 834 aa18.14■□□□□ 0.49
FAM3A-222ENST00000621967 PAFAH2Q99487 392 aa18.14■□□□□ 0.49
FAM3A-222ENST00000621967 LBHD1Q9BQE6 289 aaPredicted RBP18.14■□□□□ 0.49
FAM3A-222ENST00000621967 SYNCQ9H7C4 482 aa18.14■□□□□ 0.49
FAM3A-222ENST00000621967 RSAD1Q9HA92 442 aa18.14■□□□□ 0.49
FAM3A-222ENST00000621967 SLCO1B3Q9NPD5 702 aa18.14■□□□□ 0.49
FAM3A-222ENST00000621967 IL23AQ9NPF7 189 aa18.14■□□□□ 0.49
FAM3A-222ENST00000621967 SNTG2Q9NY99 539 aa18.14■□□□□ 0.49
FAM3A-222ENST00000621967 MCM8Q9UJA3 840 aa18.14■□□□□ 0.49
FAM3A-222ENST00000621967 USP18Q9UMW8 372 aa18.14■□□□□ 0.49
FAM3A-222ENST00000621967 SCN1AP35498 2009 aa18.14■□□□□ 0.49
FAM3A-222ENST00000621967 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.13■□□□□ 0.49
FAM3A-222ENST00000621967 A0A0U1RQF3 1178 aa18.13■□□□□ 0.49
FAM3A-222ENST00000621967 TCRBV7S3A2A0A539 114 aa18.13■□□□□ 0.49
FAM3A-222ENST00000621967 RNF8O76064 485 aa18.13■□□□□ 0.49
FAM3A-222ENST00000621967 KRT16P08779 473 aa18.13■□□□□ 0.49
FAM3A-222ENST00000621967 EIF3EP60228 445 aaKnown RBP18.13■□□□□ 0.49
FAM3A-222ENST00000621967 CBLBQ13191 982 aa18.13■□□□□ 0.49
FAM3A-222ENST00000621967 ORC1Q13415 861 aa18.13■□□□□ 0.49
FAM3A-222ENST00000621967 EFTUD2Q15029 972 aaKnown RBP eCLIP18.13■□□□□ 0.491e-5■■■□□ 16.7
FAM3A-222ENST00000621967 TAF5Q15542 800 aa18.13■□□□□ 0.49
FAM3A-222ENST00000621967 CYP4V2Q6ZWL3 525 aaPredicted RBP18.13■□□□□ 0.49
FAM3A-222ENST00000621967 CEP57Q86XR8 500 aa18.13■□□□□ 0.49
FAM3A-222ENST00000621967 TMEM130Q8N3G9 435 aa18.13■□□□□ 0.49
FAM3A-222ENST00000621967 KCTD6Q8NC69 237 aa18.13■□□□□ 0.49
FAM3A-222ENST00000621967 RNF169Q8NCN4 708 aa18.13■□□□□ 0.49
FAM3A-222ENST00000621967 FBXO36Q8NEA4 188 aa18.13■□□□□ 0.49
FAM3A-222ENST00000621967 FBF1Q8TES7 1133 aa18.13■□□□□ 0.49
FAM3A-222ENST00000621967 PEBP4Q96S96 227 aa18.13■□□□□ 0.49
FAM3A-222ENST00000621967 ASNSD1Q9NWL6 643 aa18.13■□□□□ 0.49
FAM3A-222ENST00000621967 PCSK1NQ9UHG2 260 aa18.13■□□□□ 0.49
FAM3A-222ENST00000621967 LTBP2Q14767 1821 aa18.13■□□□□ 0.49
FAM3A-222ENST00000621967 MCF2LO15068 1137 aa18.13■□□□□ 0.49
FAM3A-222ENST00000621967 ACRP10323 421 aa18.13■□□□□ 0.49
FAM3A-222ENST00000621967 VDRP11473 427 aa18.13■□□□□ 0.49
FAM3A-222ENST00000621967 EZRP15311 586 aaKnown RBP18.13■□□□□ 0.49
FAM3A-222ENST00000621967 KRT4P19013 534 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms