RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 PPM1NQ8N819 430 aa11.1□□□□□ -0.63
CDH1-214ENST00000621016 FAM111AQ96PZ2 611 aa11.1□□□□□ -0.63
CDH1-214ENST00000621016 TWNKQ96RR1 684 aa11.1□□□□□ -0.63
CDH1-214ENST00000621016 PAFAH2Q99487 392 aa11.1□□□□□ -0.63
CDH1-214ENST00000621016 PDP2Q9P2J9 529 aa11.1□□□□□ -0.63
CDH1-214ENST00000621016 STOML1Q9UBI4 398 aa11.1□□□□□ -0.63
CDH1-214ENST00000621016 VPS51Q9UID3 782 aa11.1□□□□□ -0.63
CDH1-214ENST00000621016 DSEQ9UL01 958 aa11.1□□□□□ -0.63
CDH1-214ENST00000621016 CHKBQ9Y259 395 aa11.1□□□□□ -0.63
CDH1-214ENST00000621016 NOX1Q9Y5S8 564 aa11.1□□□□□ -0.63
CDH1-214ENST00000621016 CNTNAP2Q9UHC6 1331 aa11.1□□□□□ -0.63
CDH1-214ENST00000621016 LRRC37AA6NMS7 1700 aa11.1□□□□□ -0.63
CDH1-214ENST00000621016 ABLIM1O14639 778 aa11.1□□□□□ -0.63
CDH1-214ENST00000621016 ZBTB11O95625 1053 aaPredicted RBP11.1□□□□□ -0.63
CDH1-214ENST00000621016 ITGBL1O95965 494 aaPredicted RBP11.1□□□□□ -0.63
CDH1-214ENST00000621016 ASS1P00966 412 aaKnown RBP11.1□□□□□ -0.63
CDH1-214ENST00000621016 S100BP04271 92 aaPredicted RBP11.1□□□□□ -0.63
CDH1-214ENST00000621016 CALB1P05937 261 aa11.1□□□□□ -0.63
CDH1-214ENST00000621016 RPL22P35268 128 aaKnown RBP11.1□□□□□ -0.63
CDH1-214ENST00000621016 CDKN2BP42772 138 aa11.1□□□□□ -0.63
CDH1-214ENST00000621016 CCNG1P51959 295 aa11.1□□□□□ -0.63
CDH1-214ENST00000621016 TCEAL1Q15170 157 aa11.1□□□□□ -0.63
CDH1-214ENST00000621016 DCAF15Q66K64 600 aa11.1□□□□□ -0.63
CDH1-214ENST00000621016 KLC3Q6P597 504 aa11.1□□□□□ -0.63
CDH1-214ENST00000621016 SYDE1Q6ZW31 735 aaPredicted RBP11.1□□□□□ -0.63
CDH1-214ENST00000621016 FBXO16Q8IX29 292 aaPredicted RBP11.1□□□□□ -0.63
CDH1-214ENST00000621016 NME8Q8N427 588 aa11.1□□□□□ -0.63
CDH1-214ENST00000621016 RIN3Q8TB24 985 aa11.1□□□□□ -0.63
CDH1-214ENST00000621016 OTUD5Q96G74 571 aa11.1□□□□□ -0.63
CDH1-214ENST00000621016 PIWIL1Q96J94 861 aaKnown RBP11.1□□□□□ -0.63
CDH1-214ENST00000621016 RAB3IPQ96QF0 476 aaPredicted RBP11.1□□□□□ -0.63
CDH1-214ENST00000621016 MRPL4Q9BYD3 311 aaKnown RBP11.1□□□□□ -0.63
CDH1-214ENST00000621016 MAGEB5Q9BZ81 275 aa11.1□□□□□ -0.63
CDH1-214ENST00000621016 TPK1Q9H3S4 243 aa11.1□□□□□ -0.63
CDH1-214ENST00000621016 DHX33Q9H6R0 707 aaKnown RBP11.1□□□□□ -0.63
CDH1-214ENST00000621016 FBXO6Q9NRD1 293 aaPredicted RBP11.1□□□□□ -0.63
CDH1-214ENST00000621016 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.1□□□□□ -0.63
CDH1-214ENST00000621016 FAM49BQ9NUQ9 324 aa11.1□□□□□ -0.63
CDH1-214ENST00000621016 ARMCX1Q9P291 453 aa11.1□□□□□ -0.63
CDH1-214ENST00000621016 LRCH4O75427 683 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 TNNC2P02585 160 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 NFICP08651 508 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 DDX5P17844 614 aaKnown RBP11.09□□□□□ -0.63
CDH1-214ENST00000621016 GPX6P59796 221 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 LMNB2Q03252 620 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 BMPR2Q13873 1038 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 TNFAIP8L3Q5GJ75 292 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 IGDCC3Q8IVU1 814 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 FBXO41Q8TF61 875 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 PCYT2Q99447 389 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 LPIN3Q9BQK8 851 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 MINDY3Q9H8M7 445 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 ZNF395Q9H8N7 513 aaPredicted RBP11.09□□□□□ -0.63
CDH1-214ENST00000621016 RAB6BQ9NRW1 208 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 H0YCG3 227 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 TOM1L1O75674 476 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 TMEM63AO94886 807 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 MYCP01106 439 aaPredicted RBP11.09□□□□□ -0.63
CDH1-214ENST00000621016 APRTP07741 180 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 MIPP30301 263 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 ELK3P41970 407 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 CAMK2BQ13554 666 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 CYLC2Q14093 348 aaPredicted RBP11.09□□□□□ -0.63
CDH1-214ENST00000621016 ZNF667Q5HYK9 610 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 IZUMO2Q6UXV1 221 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 TRIM72Q6ZMU5 477 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 ZBTB8OSQ8IWT0 167 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 PDIK1LQ8N165 341 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 ANKLE1Q8NAG6 615 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 RFWD2Q8NHY2 731 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 DQX1Q8TE96 717 aaKnown RBP11.09□□□□□ -0.63
CDH1-214ENST00000621016 AZIN2Q96A70 460 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 MECRQ9BV79 373 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 HOXC10Q9NYD6 342 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 DOCK5Q9H7D0 1870 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 MYOCOSA0A1B0GUC4 107 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 FBP2O00757 339 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 PMM2O15305 246 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 MAP3K7O43318 606 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 TBX10O75333 385 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 USP1O94782 785 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 ARIH2O95376 493 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 MT-ND3P03897 115 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 CDK4P11802 303 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 ARL4CP56559 192 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 MKRN3Q13064 507 aaKnown RBP11.09□□□□□ -0.63
CDH1-214ENST00000621016 KPNB1Q14974 876 aaKnown RBP11.09□□□□□ -0.63
CDH1-214ENST00000621016 HADHQ16836 314 aaKnown RBP11.09□□□□□ -0.63
CDH1-214ENST00000621016 PAOXQ6QHF9 649 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 OTOAQ7RTW8 1153 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 ARFGAP1Q8N6T3 406 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 GIPC3Q8TF64 312 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 CPT1BQ92523 772 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 ZNF75CPQ92670 426 aaPredicted RBP11.09□□□□□ -0.63
CDH1-214ENST00000621016 GATA6Q92908 595 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 SLCO2A1Q92959 643 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 FAF2Q96CS3 445 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 SPATA33Q96N06 139 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 ADPGKQ9BRR6 497 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 APOL6Q9BWW8 343 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms