RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 A0A0B4J269 797 aa7.21□□□□□ -1.26
NEDD9-216ENST00000620854 TMEM191CA6NGB0 347 aa7.21□□□□□ -1.26
NEDD9-216ENST00000620854 HNRNPCL1O60812 293 aaKnown RBP7.21□□□□□ -1.26
NEDD9-216ENST00000620854 NELFEP18615 380 aaKnown RBP7.21□□□□□ -1.26
NEDD9-216ENST00000620854 ABCD1P33897 745 aa7.21□□□□□ -1.26
NEDD9-216ENST00000620854 INHBCP55103 352 aa7.21□□□□□ -1.26
NEDD9-216ENST00000620854 DYNC1I2Q13409 638 aaKnown RBP7.21□□□□□ -1.26
NEDD9-216ENST00000620854 TMED1Q13445 227 aa7.21□□□□□ -1.26
NEDD9-216ENST00000620854 RAB6CQ53S08 254 aa7.21□□□□□ -1.26
NEDD9-216ENST00000620854 JADE1Q6IE81 842 aa7.21□□□□□ -1.26
NEDD9-216ENST00000620854 PLEKHA7Q6IQ23 1121 aa7.21□□□□□ -1.26
NEDD9-216ENST00000620854 USP50Q70EL3 339 aaPredicted RBP7.21□□□□□ -1.26
NEDD9-216ENST00000620854 MARK2Q7KZI7 788 aaKnown RBP7.21□□□□□ -1.26
NEDD9-216ENST00000620854 RELL1Q8IUW5 271 aa7.21□□□□□ -1.26
NEDD9-216ENST00000620854 OR6Y1Q8NGX8 325 aa7.21□□□□□ -1.26
NEDD9-216ENST00000620854 GDPD5Q8WTR4 605 aa7.21□□□□□ -1.26
NEDD9-216ENST00000620854 HDAC11Q96DB2 347 aa7.21□□□□□ -1.26
NEDD9-216ENST00000620854 APOPT1Q96IL0 206 aa7.21□□□□□ -1.26
NEDD9-216ENST00000620854 HEXIM2Q96MH2 286 aaKnown RBP7.21□□□□□ -1.26
NEDD9-216ENST00000620854 RAB6CQ9H0N0 254 aa7.21□□□□□ -1.26
NEDD9-216ENST00000620854 ADAMTS6Q9UKP5 1117 aa7.21□□□□□ -1.26
NEDD9-216ENST00000620854 PCDHGB4Q9UN71 923 aa7.21□□□□□ -1.26
NEDD9-216ENST00000620854 PCDHGB5Q9Y5G0 923 aa7.21□□□□□ -1.26
NEDD9-216ENST00000620854 SNCAIPQ9Y6H5 919 aa7.21□□□□□ -1.26
NEDD9-216ENST00000620854 DGKIO75912 1065 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 TM7SF2O76062 418 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 KRT3P12035 628 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 SLC12A1Q13621 1099 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 DPYSL3Q14195 570 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 SH3PXD2AQ5TCZ1 1133 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 MYLK4Q86YV6 388 aaPredicted RBP7.2□□□□□ -1.26
NEDD9-216ENST00000620854 MAP4K3Q8IVH8 894 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 DEFB107AQ8IZN7 70 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 PDZD8Q8NEN9 1154 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 ZFAND2BQ8WV99 257 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 FOXP3Q9BZS1 431 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 JPH1Q9HDC5 661 aaPredicted RBP7.2□□□□□ -1.26
NEDD9-216ENST00000620854 ZNF302Q9NR11 478 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 GPATCH2LQ9NWQ4 482 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 ZC3H7BQ9UGR2 993 aaKnown RBP7.2□□□□□ -1.26
NEDD9-216ENST00000620854 BCAP29Q9UHQ4 241 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 TAGLN3Q9UI15 199 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 ZNF541Q9H0D2 1346 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 MAST2Q6P0Q8 1798 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 PEX1O43933 1283 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 VNN1O95497 513 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 VCLP18206 1134 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 TCN1P20061 433 aaPredicted RBP7.2□□□□□ -1.26
NEDD9-216ENST00000620854 GRIA2P42262 883 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 CASP2P42575 452 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 ACTR3P61158 418 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 TATDN1Q6P1N9 297 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 TRMT10BQ6PF06 316 aaKnown RBP7.2□□□□□ -1.26
NEDD9-216ENST00000620854 KIAA0319LQ8IZA0 1049 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 NAT8LQ8N9F0 302 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 GPRC5AQ8NFJ5 357 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 PRPF31Q8WWY3 499 aaKnown RBP7.2□□□□□ -1.26
NEDD9-216ENST00000620854 NLRP7Q8WX94 980 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 ANKRD36BP1Q96IX9 119 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 CNBD2Q96M20 576 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 MFSD14AQ96MC6 490 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 AGO4Q9HCK5 861 aaKnown RBP7.2□□□□□ -1.26
NEDD9-216ENST00000620854 DNAJC16Q9Y2G8 782 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 ANKRD12Q6UB98 2062 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 A8MXQ7 604 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 ITM2AO43736 263 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 ZNF862O60290 1169 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 KRT37O76014 449 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 TXNP10599 105 aaKnown RBP7.2□□□□□ -1.26
NEDD9-216ENST00000620854 RAG1P15918 1043 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 ETV4P43268 484 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 CDK7P50613 346 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 GTF2A2P52657 109 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 CDH8P55286 799 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 PSMC1P62191 440 aaKnown RBP7.2□□□□□ -1.26
NEDD9-216ENST00000620854 IL1RL1Q01638 556 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 STX3Q13277 289 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 TRMT5Q32P41 509 aaKnown RBP7.2□□□□□ -1.26
NEDD9-216ENST00000620854 TMEM35BQ8NCS4 154 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 ZNF398Q8TD17 642 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 PPP2R3CQ969Q6 453 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 ALKBH8Q96BT7 664 aaKnown RBP7.2□□□□□ -1.26
NEDD9-216ENST00000620854 PGBD4Q96DM1 585 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 GRIP2Q9C0E4 1043 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 WWP1Q9H0M0 922 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 Q9H521 79 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 SLC38A10Q9HBR0 1119 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 TMEM165Q9HC07 324 aa7.2□□□□□ -1.26
NEDD9-216ENST00000620854 KCNN4O15554 427 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 ADCY3O60266 1144 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 ITGAVP06756 1048 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 VAV1P15498 845 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 MMP8P22894 467 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 RAP1GAPP47736 663 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 CDH6P55285 790 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 MYL6P60660 151 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 GK3PQ14409 553 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 ZACNQ401N2 412 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 TMEM259Q4ZIN3 620 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 RNF111Q6ZNA4 994 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms