RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 INCA1Q0VD86 236 aa13.57□□□□□ -0.24
SKP2-209ENST00000620197 CDC16Q13042 620 aa13.57□□□□□ -0.24
SKP2-209ENST00000620197 TPSAB1Q15661 275 aa13.57□□□□□ -0.24
SKP2-209ENST00000620197 SEPT7Q16181 437 aaKnown RBP13.57□□□□□ -0.24
SKP2-209ENST00000620197 ATG16L1Q676U5 607 aa13.57□□□□□ -0.24
SKP2-209ENST00000620197 PDSS2Q86YH6 399 aa13.57□□□□□ -0.24
SKP2-209ENST00000620197 FZD8Q9H461 694 aa13.57□□□□□ -0.24
SKP2-209ENST00000620197 COL4A4P53420 1690 aaPredicted RBP13.57□□□□□ -0.24
SKP2-209ENST00000620197 AP1G1O43747 822 aa13.56□□□□□ -0.24
SKP2-209ENST00000620197 KRT37O76014 449 aa13.56□□□□□ -0.24
SKP2-209ENST00000620197 FGF3P11487 239 aaPredicted RBP13.56□□□□□ -0.24
SKP2-209ENST00000620197 NIPAL4Q0D2K0 466 aa13.56□□□□□ -0.24
SKP2-209ENST00000620197 FAM172AQ8WUF8 416 aa13.56□□□□□ -0.24
SKP2-209ENST00000620197 PRPF31Q8WWY3 499 aaKnown RBP13.56□□□□□ -0.24
SKP2-209ENST00000620197 HAPLN3Q96S86 360 aa13.56□□□□□ -0.24
SKP2-209ENST00000620197 GCATO75600 419 aa13.56□□□□□ -0.24
SKP2-209ENST00000620197 HMGCRP04035 888 aa13.56□□□□□ -0.24
SKP2-209ENST00000620197 UBA1P22314 1058 aaKnown RBP13.56□□□□□ -0.24
SKP2-209ENST00000620197 PKDCCQ504Y2 493 aa13.56□□□□□ -0.24
SKP2-209ENST00000620197 CNPY3Q9BT09 278 aa13.56□□□□□ -0.24
SKP2-209ENST00000620197 PRR5-ARHGAP8B1AHC4 643 aa13.56□□□□□ -0.24
SKP2-209ENST00000620197 CASQ2O14958 399 aaPredicted RBP13.56□□□□□ -0.24
SKP2-209ENST00000620197 EGFRP00533 1210 aa13.56□□□□□ -0.24
SKP2-209ENST00000620197 RAP1GAPP47736 663 aa13.56□□□□□ -0.24
SKP2-209ENST00000620197 NUMBP49757 651 aa13.56□□□□□ -0.24
SKP2-209ENST00000620197 AQP5P55064 265 aa13.56□□□□□ -0.24
SKP2-209ENST00000620197 ARHGAP8P85298 464 aa13.56□□□□□ -0.24
SKP2-209ENST00000620197 DSG1Q02413 1049 aa13.56□□□□□ -0.24
SKP2-209ENST00000620197 MSLNQ13421 630 aaPredicted RBP13.56□□□□□ -0.24
SKP2-209ENST00000620197 PDK2Q15119 407 aa13.56□□□□□ -0.24
SKP2-209ENST00000620197 TEDDM1Q5T9Z0 273 aa13.56□□□□□ -0.24
SKP2-209ENST00000620197 DTX3LQ8TDB6 740 aa13.56□□□□□ -0.24
SKP2-209ENST00000620197 PIWIL1Q96J94 861 aaKnown RBP13.56□□□□□ -0.24
SKP2-209ENST00000620197 CLPTM1LQ96KA5 538 aa13.56□□□□□ -0.24
SKP2-209ENST00000620197 SORT1Q99523 831 aa13.56□□□□□ -0.24
SKP2-209ENST00000620197 EBF4Q9BQW3 602 aa13.56□□□□□ -0.24
SKP2-209ENST00000620197 ACAD9Q9H845 621 aa13.56□□□□□ -0.24
SKP2-209ENST00000620197 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.56□□□□□ -0.24
SKP2-209ENST00000620197 THAP1Q9NVV9 213 aa13.56□□□□□ -0.24
SKP2-209ENST00000620197 ZC3H7BQ9UGR2 993 aaKnown RBP13.56□□□□□ -0.24
SKP2-209ENST00000620197 FKBP6O75344 327 aa13.55□□□□□ -0.24
SKP2-209ENST00000620197 ARRB2P32121 409 aa13.55□□□□□ -0.24
SKP2-209ENST00000620197 PDE1BQ01064 536 aa13.55□□□□□ -0.24
SKP2-209ENST00000620197 PTPN11Q06124 597 aaPredicted RBP13.55□□□□□ -0.24
SKP2-209ENST00000620197 CHI3L2Q15782 390 aa13.55□□□□□ -0.24
SKP2-209ENST00000620197 CCDC6Q16204 474 aa13.55□□□□□ -0.24
SKP2-209ENST00000620197 ZFYVE27Q5T4F4 411 aa13.55□□□□□ -0.24
SKP2-209ENST00000620197 MPZL3Q6UWV2 235 aa13.55□□□□□ -0.24
SKP2-209ENST00000620197 C4orf22Q6V702 233 aa13.55□□□□□ -0.24
SKP2-209ENST00000620197 CATSPERGQ6ZRH7 1159 aa13.55□□□□□ -0.24
SKP2-209ENST00000620197 ZC3H18Q86VM9 953 aaKnown RBP13.55□□□□□ -0.24
SKP2-209ENST00000620197 ARID3BQ8IVW6 561 aaPredicted RBP13.55□□□□□ -0.24
SKP2-209ENST00000620197 PDCD7Q8N8D1 485 aaKnown RBP13.55□□□□□ -0.24
SKP2-209ENST00000620197 C1orf127Q8N9H9 656 aa13.55□□□□□ -0.24
SKP2-209ENST00000620197 SMC1BQ8NDV3 1235 aa13.55□□□□□ -0.24
SKP2-209ENST00000620197 PCDH19Q8TAB3 1148 aa13.55□□□□□ -0.24
SKP2-209ENST00000620197 ISL2Q96A47 359 aa13.55□□□□□ -0.24
SKP2-209ENST00000620197 NLRP4Q96MN2 994 aa13.55□□□□□ -0.24
SKP2-209ENST00000620197 EBNA1BP2Q99848 306 aaKnown RBP13.55□□□□□ -0.24
SKP2-209ENST00000620197 GBA2Q9HCG7 927 aaPredicted RBP13.55□□□□□ -0.24
SKP2-209ENST00000620197 S100A14Q9HCY8 104 aa13.55□□□□□ -0.24
SKP2-209ENST00000620197 ZNF277Q9NRM2 450 aaPredicted RBP13.55□□□□□ -0.24
SKP2-209ENST00000620197 ASNSD1Q9NWL6 643 aa13.55□□□□□ -0.24
SKP2-209ENST00000620197 AFG3L2Q9Y4W6 797 aa13.55□□□□□ -0.24
SKP2-209ENST00000620197 PCDHA11Q9Y5I1 949 aa13.55□□□□□ -0.24
SKP2-209ENST00000620197 LGR5O75473 907 aa13.55□□□□□ -0.24
SKP2-209ENST00000620197 ENO1P06733 434 aaKnown RBP13.55□□□□□ -0.24
SKP2-209ENST00000620197 OSBPP22059 807 aa13.55□□□□□ -0.24
SKP2-209ENST00000620197 MAGEA12P43365 314 aa13.55□□□□□ -0.24
SKP2-209ENST00000620197 LAMTOR4Q0VGL1 99 aa13.55□□□□□ -0.24
SKP2-209ENST00000620197 CCNIQ14094 377 aa13.55□□□□□ -0.24
SKP2-209ENST00000620197 CCDC14Q49A88 953 aa13.55□□□□□ -0.24
SKP2-209ENST00000620197 DARS2Q6PI48 645 aaKnown RBP13.55□□□□□ -0.24
SKP2-209ENST00000620197 MARK2Q7KZI7 788 aaKnown RBP13.55□□□□□ -0.24
SKP2-209ENST00000620197 AFG1LQ8WV93 481 aa13.55□□□□□ -0.24
SKP2-209ENST00000620197 STMN2Q93045 179 aa13.55□□□□□ -0.24
SKP2-209ENST00000620197 TUBGCP5Q96RT8 1024 aa13.55□□□□□ -0.24
SKP2-209ENST00000620197 PCMTD2Q9NV79 361 aa13.55□□□□□ -0.24
SKP2-209ENST00000620197 PCSK1NQ9UHG2 260 aa13.55□□□□□ -0.24
SKP2-209ENST00000620197 KAT6AQ92794 2004 aa13.55□□□□□ -0.24
SKP2-209ENST00000620197 MDM4O15151 490 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 RNASEH1O60930 286 aaKnown RBP13.54□□□□□ -0.24
SKP2-209ENST00000620197 STAU1O95793 577 aaKnown RBP13.54□□□□□ -0.24
SKP2-209ENST00000620197 PTPRAP18433 802 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 CNTFP26441 200 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 YWHAGP61981 247 aaKnown RBP eCLIP13.54□□□□□ -0.24
SKP2-209ENST00000620197 XIAPP98170 497 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 CREB5Q02930 508 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 CXCL9Q07325 125 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 TFDP2Q14188 446 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 IER5Q5VY09 327 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 TRMT10BQ6PF06 316 aaKnown RBP13.54□□□□□ -0.24
SKP2-209ENST00000620197 SCARA5Q6ZMJ2 495 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 ACAD11Q709F0 780 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 RAPH1Q70E73 1250 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 CCNJLQ8IV13 435 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 MPP5Q8N3R9 675 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 STKLD1Q8NE28 680 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 GSDMBQ8TAX9 411 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 HSPH1Q92598 858 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms