RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 GLRA4Q5JXX5 417 aa8.15□□□□□ -1.1
CBWD1-228ENST00000619157 FBXW10Q5XX13 1052 aa8.15□□□□□ -1.1
CBWD1-228ENST00000619157 CD300LGQ6UXG3 332 aa8.15□□□□□ -1.1
CBWD1-228ENST00000619157 ALKAL1Q6UXT8 129 aa8.15□□□□□ -1.1
CBWD1-228ENST00000619157 DDX53Q86TM3 631 aaKnown RBP8.15□□□□□ -1.1
CBWD1-228ENST00000619157 VPS52Q8N1B4 723 aa8.15□□□□□ -1.1
CBWD1-228ENST00000619157 MRPL43Q8N983 215 aaKnown RBP8.15□□□□□ -1.1
CBWD1-228ENST00000619157 URGCPQ8TCY9 931 aa8.15□□□□□ -1.1
CBWD1-228ENST00000619157 USP33Q8TEY7 942 aa8.15□□□□□ -1.1
CBWD1-228ENST00000619157 RSPH1Q8WYR4 309 aa8.15□□□□□ -1.1
CBWD1-228ENST00000619157 B3GALT6Q96L58 329 aa8.15□□□□□ -1.1
CBWD1-228ENST00000619157 ZMAT2Q96NC0 199 aaKnown RBP8.15□□□□□ -1.1
CBWD1-228ENST00000619157 FERD3LQ96RJ6 166 aa8.15□□□□□ -1.1
CBWD1-228ENST00000619157 UHRF1Q96T88 793 aaPredicted RBP8.15□□□□□ -1.1
CBWD1-228ENST00000619157 TMEM175Q9BSA9 504 aa8.15□□□□□ -1.1
CBWD1-228ENST00000619157 SPON2Q9BUD6 331 aa8.15□□□□□ -1.1
CBWD1-228ENST00000619157 TIPINQ9BVW5 301 aa8.15□□□□□ -1.1
CBWD1-228ENST00000619157 SSBP3Q9BWW4 388 aaPredicted RBP8.15□□□□□ -1.1
CBWD1-228ENST00000619157 PANK2Q9BZ23 570 aa8.15□□□□□ -1.1
CBWD1-228ENST00000619157 TRIM6Q9C030 488 aaPredicted RBP8.15□□□□□ -1.1
CBWD1-228ENST00000619157 C17orf75Q9HAS0 396 aa8.15□□□□□ -1.1
CBWD1-228ENST00000619157 UBN1Q9NPG3 1134 aa8.15□□□□□ -1.1
CBWD1-228ENST00000619157 KCND2Q9NZV8 630 aa8.15□□□□□ -1.1
CBWD1-228ENST00000619157 ODF2LQ9ULJ1 636 aa8.15□□□□□ -1.1
CBWD1-228ENST00000619157 GDAQ9Y2T3 454 aa8.15□□□□□ -1.1
CBWD1-228ENST00000619157 PRG3Q9Y2Y8 225 aaPredicted RBP8.15□□□□□ -1.1
CBWD1-228ENST00000619157 ZMYM2Q9UBW7 1377 aa8.14□□□□□ -1.11
CBWD1-228ENST00000619157 AURKAO14965 403 aa8.14□□□□□ -1.11
CBWD1-228ENST00000619157 SPTLC2O15270 562 aa8.14□□□□□ -1.11
CBWD1-228ENST00000619157 MBTPS2O43462 519 aa8.14□□□□□ -1.11
CBWD1-228ENST00000619157 CLASP2O75122 1294 aaKnown RBP8.14□□□□□ -1.11
CBWD1-228ENST00000619157 PPP6R2O75170 966 aa8.14□□□□□ -1.11
CBWD1-228ENST00000619157 YEATS4O95619 227 aa8.14□□□□□ -1.11
CBWD1-228ENST00000619157 CTSAP10619 480 aa8.14□□□□□ -1.11
CBWD1-228ENST00000619157 NMT1P30419 496 aaKnown RBP8.14□□□□□ -1.11
CBWD1-228ENST00000619157 OR1G1P47890 313 aa8.14□□□□□ -1.11
CBWD1-228ENST00000619157 OSTNP61366 133 aa8.14□□□□□ -1.11
CBWD1-228ENST00000619157 NCBP1Q09161 790 aaKnown RBP8.14□□□□□ -1.11
CBWD1-228ENST00000619157 GRIK3Q13003 919 aa8.14□□□□□ -1.11
CBWD1-228ENST00000619157 STK38Q15208 465 aa8.14□□□□□ -1.11
CBWD1-228ENST00000619157 DCAF4L1Q3SXM0 396 aa8.14□□□□□ -1.11
CBWD1-228ENST00000619157 ZNF568Q3ZCX4 644 aa8.14□□□□□ -1.11
CBWD1-228ENST00000619157 ZC2HC1CQ53FD0 456 aaPredicted RBP8.14□□□□□ -1.11
CBWD1-228ENST00000619157 ZBTB41Q5SVQ8 909 aa8.14□□□□□ -1.11
CBWD1-228ENST00000619157 SYCE2Q6PIF2 218 aa8.14□□□□□ -1.11
CBWD1-228ENST00000619157 HAUS6Q7Z4H7 955 aa8.14□□□□□ -1.11
CBWD1-228ENST00000619157 FAM178BQ8IXR5 827 aa8.14□□□□□ -1.11
CBWD1-228ENST00000619157 LGI4Q8N135 537 aa8.14□□□□□ -1.11
CBWD1-228ENST00000619157 FAM26EQ8N5C1 309 aa8.14□□□□□ -1.11
CBWD1-228ENST00000619157 TAB3Q8N5C8 712 aaPredicted RBP8.14□□□□□ -1.11
CBWD1-228ENST00000619157 MICAL1Q8TDZ2 1067 aa8.14□□□□□ -1.11
CBWD1-228ENST00000619157 STAMQ92783 540 aa8.14□□□□□ -1.11
CBWD1-228ENST00000619157 TMEM169Q96HH4 297 aa8.14□□□□□ -1.11
CBWD1-228ENST00000619157 PPP1R10Q96QC0 940 aaKnown RBP8.14□□□□□ -1.11
CBWD1-228ENST00000619157 TM9SF2Q99805 663 aa8.14□□□□□ -1.11
CBWD1-228ENST00000619157 STRA6Q9BX79 667 aa8.14□□□□□ -1.11
CBWD1-228ENST00000619157 MRPL4Q9BYD3 311 aaKnown RBP8.14□□□□□ -1.11
CBWD1-228ENST00000619157 S1PR5Q9H228 398 aa8.14□□□□□ -1.11
CBWD1-228ENST00000619157 TLE6Q9H808 572 aa8.14□□□□□ -1.11
CBWD1-228ENST00000619157 ENTPD7Q9NQZ7 604 aa8.14□□□□□ -1.11
CBWD1-228ENST00000619157 FRMD3A2A2Y4 597 aa8.13□□□□□ -1.11
CBWD1-228ENST00000619157 MROH6A6NGR9 719 aa8.13□□□□□ -1.11
CBWD1-228ENST00000619157 CASTOR2A6NHX0 329 aa8.13□□□□□ -1.11
CBWD1-228ENST00000619157 ANKRD63C9JTQ0 380 aa8.13□□□□□ -1.11
CBWD1-228ENST00000619157 CXCL14O95715 111 aa8.13□□□□□ -1.11
CBWD1-228ENST00000619157 PIGRP01833 764 aa8.13□□□□□ -1.11
CBWD1-228ENST00000619157 SOD2P04179 222 aa8.13□□□□□ -1.11
CBWD1-228ENST00000619157 NTRK1P04629 796 aa8.13□□□□□ -1.11
CBWD1-228ENST00000619157 ALDH2P05091 517 aa8.13□□□□□ -1.11
CBWD1-228ENST00000619157 EPCAMP16422 314 aa8.13□□□□□ -1.11
CBWD1-228ENST00000619157 RPL13P26373 211 aaKnown RBP8.13□□□□□ -1.11
CBWD1-228ENST00000619157 TNFSF9P41273 254 aa8.13□□□□□ -1.11
CBWD1-228ENST00000619157 CASP5P51878 434 aa8.13□□□□□ -1.11
CBWD1-228ENST00000619157 GTF2BQ00403 316 aa8.13□□□□□ -1.11
CBWD1-228ENST00000619157 KRT17Q04695 432 aa8.13□□□□□ -1.11
CBWD1-228ENST00000619157 MCL1Q07820 350 aa8.13□□□□□ -1.11
CBWD1-228ENST00000619157 COASYQ13057 564 aa8.13□□□□□ -1.11
CBWD1-228ENST00000619157 SLC10A6Q3KNW5 377 aa8.13□□□□□ -1.11
CBWD1-228ENST00000619157 RRAGBQ5VZM2 374 aa8.13□□□□□ -1.11
CBWD1-228ENST00000619157 TMEM184AQ6ZMB5 413 aa8.13□□□□□ -1.11
CBWD1-228ENST00000619157 EP400NLQ6ZTU2 488 aa8.13□□□□□ -1.11
CBWD1-228ENST00000619157 SFR1Q86XK3 245 aa8.13□□□□□ -1.11
CBWD1-228ENST00000619157 MYCT1Q8N699 235 aa8.13□□□□□ -1.11
CBWD1-228ENST00000619157 PDILTQ8N807 584 aa8.13□□□□□ -1.11
CBWD1-228ENST00000619157 SMRP1Q8NCR6 262 aa8.13□□□□□ -1.11
CBWD1-228ENST00000619157 ZSWIM2Q8NEG5 633 aa8.13□□□□□ -1.11
CBWD1-228ENST00000619157 HASPINQ8TF76 798 aa8.13□□□□□ -1.11
CBWD1-228ENST00000619157 SLC22A17Q8WUG5 538 aa8.13□□□□□ -1.11
CBWD1-228ENST00000619157 SNX27Q96L92 541 aa8.13□□□□□ -1.11
CBWD1-228ENST00000619157 ZNF396Q96N95 335 aaPredicted RBP8.13□□□□□ -1.11
CBWD1-228ENST00000619157 KLHL5Q96PQ7 755 aa8.13□□□□□ -1.11
CBWD1-228ENST00000619157 HERC2P3Q9BVR0 1158 aa8.13□□□□□ -1.11
CBWD1-228ENST00000619157 PARVGQ9HBI0 331 aa8.13□□□□□ -1.11
CBWD1-228ENST00000619157 NGRNQ9NPE2 291 aaKnown RBP8.13□□□□□ -1.11
CBWD1-228ENST00000619157 PUF60Q9UHX1 559 aaKnown RBP8.13□□□□□ -1.11
CBWD1-228ENST00000619157 TBX20Q9UMR3 447 aa8.13□□□□□ -1.11
CBWD1-228ENST00000619157 PCDHA7Q9UN72 937 aa8.13□□□□□ -1.11
CBWD1-228ENST00000619157 TDRD15B5MCY1 1934 aaKnown RBP8.12□□□□□ -1.11
CBWD1-228ENST00000619157 SMIM28A0A1B0GU29 152 aa8.12□□□□□ -1.11
CBWD1-228ENST00000619157 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms