RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 MAML2Q8IZL2 1156 aaPredicted RBP8.65□□□□□ -1.02
NEK3-209ENST00000618856 SIX6OS1Q8N1H7 587 aa8.65□□□□□ -1.02
NEK3-209ENST00000618856 SYNPOQ8N3V7 929 aa8.65□□□□□ -1.02
NEK3-209ENST00000618856 CPA6Q8N4T0 437 aa8.65□□□□□ -1.02
NEK3-209ENST00000618856 DTWD2Q8NBA8 298 aa8.65□□□□□ -1.02
NEK3-209ENST00000618856 ANKRD20A12PQ8NF67 263 aa8.65□□□□□ -1.02
NEK3-209ENST00000618856 EPS8L1Q8TE68 723 aa8.65□□□□□ -1.02
NEK3-209ENST00000618856 NDRG1Q92597 394 aaKnown RBP8.65□□□□□ -1.02
NEK3-209ENST00000618856 EZH1Q92800 747 aaPredicted RBP8.65□□□□□ -1.02
NEK3-209ENST00000618856 NELL1Q92832 810 aa8.65□□□□□ -1.02
NEK3-209ENST00000618856 P2RY11Q96G91 374 aa8.65□□□□□ -1.02
NEK3-209ENST00000618856 CHRDQ9H2X0 955 aa8.65□□□□□ -1.02
NEK3-209ENST00000618856 FBRSL1Q9HCM7 1045 aaKnown RBP8.65□□□□□ -1.02
NEK3-209ENST00000618856 ABCC13Q9NSE7 274 aa8.65□□□□□ -1.02
NEK3-209ENST00000618856 SMPD4Q9NXE4 827 aa8.65□□□□□ -1.02
NEK3-209ENST00000618856 MARK1Q9P0L2 795 aa8.65□□□□□ -1.02
NEK3-209ENST00000618856 NOCTQ9UK39 431 aaKnown RBP8.65□□□□□ -1.02
NEK3-209ENST00000618856 HCN4Q9Y3Q4 1203 aa8.65□□□□□ -1.02
NEK3-209ENST00000618856 WDR87Q6ZQQ6 2873 aa8.65□□□□□ -1.03
NEK3-209ENST00000618856 E5RJQ4 531 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 MDM4O15151 490 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 NCAM2O15394 837 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 TEX33O43247 280 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 HOXC11O43248 304 aaPredicted RBP8.64□□□□□ -1.03
NEK3-209ENST00000618856 SART1O43290 800 aaKnown RBP8.64□□□□□ -1.03
NEK3-209ENST00000618856 STC2O76061 302 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 PAPSS2O95340 614 aaPredicted RBP8.64□□□□□ -1.03
NEK3-209ENST00000618856 LSM8O95777 96 aaKnown RBP8.64□□□□□ -1.03
NEK3-209ENST00000618856 IGLV3-25P01717 112 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 CYP1A1P04798 512 aaPredicted RBP8.64□□□□□ -1.03
NEK3-209ENST00000618856 DCNP07585 359 aaKnown RBP8.64□□□□□ -1.03
NEK3-209ENST00000618856 GLI1P08151 1106 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 TDGF1P13385 188 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 LCP1P13796 627 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 CHRNB2P17787 502 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 CDK11BP21127 795 aaKnown RBP8.64□□□□□ -1.03
NEK3-209ENST00000618856 SOX5P35711 763 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 PBX1P40424 430 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 OPRD1P41143 372 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 GABRB2P47870 512 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 IFNAR2P48551 515 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 RGS7P49802 495 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 VASPP50552 380 aaPredicted RBP8.64□□□□□ -1.03
NEK3-209ENST00000618856 KPNA1P52294 538 aaPredicted RBP8.64□□□□□ -1.03
NEK3-209ENST00000618856 POLR2FP61218 127 aaKnown RBP8.64□□□□□ -1.03
NEK3-209ENST00000618856 COG7P83436 770 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 AMPD2Q01433 879 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 UBXN1Q04323 297 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 NNTQ13423 1086 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 GAS6Q14393 721 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 DHCR24Q15392 516 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 NFKBIBQ15653 356 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 DGKKQ5KSL6 1271 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 C10orf120Q5SQS8 335 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 RNF43Q68DV7 783 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 FSTL4Q6MZW2 842 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 BBS7Q8IWZ6 715 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 SCUBE3Q8IX30 993 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 PHTF2Q8N3S3 785 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 ZNF397Q8NF99 534 aaPredicted RBP8.64□□□□□ -1.03
NEK3-209ENST00000618856 OLIG1Q8TAK6 271 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 CLEC4CQ8WTT0 213 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 BAP1Q92560 729 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 AZIN2Q96A70 460 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 NAP1L5Q96NT1 182 aaPredicted RBP8.64□□□□□ -1.03
NEK3-209ENST00000618856 SLC2A13Q96QE2 648 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 CPXM1Q96SM3 734 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 SYT11Q9BT88 431 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 TTYH3Q9C0H2 523 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 PRMT8Q9NR22 394 aaPredicted RBP8.64□□□□□ -1.03
NEK3-209ENST00000618856 FAM207AQ9NSI2 230 aaPredicted RBP8.64□□□□□ -1.03
NEK3-209ENST00000618856 OLA1Q9NTK5 396 aaKnown RBP8.64□□□□□ -1.03
NEK3-209ENST00000618856 ASNSD1Q9NWL6 643 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 RAPGEFL1Q9UHV5 662 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 NUDT5Q9UKK9 219 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 MYO6Q9UM54 1294 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 ZNF510Q9Y2H8 683 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 HBS1LQ9Y450 684 aaKnown RBP8.64□□□□□ -1.03
NEK3-209ENST00000618856 MIA3Q5JRA6 1907 aa8.64□□□□□ -1.03
NEK3-209ENST00000618856 CHURC1-FNTBB4DL54 471 aa8.63□□□□□ -1.03
NEK3-209ENST00000618856 PES1O00541 588 aaKnown RBP8.63□□□□□ -1.03
NEK3-209ENST00000618856 LATS1O95835 1130 aa8.63□□□□□ -1.03
NEK3-209ENST00000618856 LTFP02788 710 aa8.63□□□□□ -1.03
NEK3-209ENST00000618856 DRD1P21728 446 aa8.63□□□□□ -1.03
NEK3-209ENST00000618856 USP8P40818 1118 aa8.63□□□□□ -1.03
NEK3-209ENST00000618856 STAT1P42224 750 aa8.63□□□□□ -1.03
NEK3-209ENST00000618856 GALK1P51570 392 aa8.63□□□□□ -1.03
NEK3-209ENST00000618856 CDR2Q01850 454 aa8.63□□□□□ -1.03
NEK3-209ENST00000618856 RING1Q06587 406 aa8.63□□□□□ -1.03
NEK3-209ENST00000618856 GOLGA8FQ08AF8 430 aa8.63□□□□□ -1.03
NEK3-209ENST00000618856 GOLGA8DPQ0D2H9 430 aa8.63□□□□□ -1.03
NEK3-209ENST00000618856 EFEMP1Q12805 493 aa8.63□□□□□ -1.03
NEK3-209ENST00000618856 NR1H3Q13133 447 aa8.63□□□□□ -1.03
NEK3-209ENST00000618856 RAPGEF1Q13905 1077 aa8.63□□□□□ -1.03
NEK3-209ENST00000618856 UBXN2BQ14CS0 331 aa8.63□□□□□ -1.03
NEK3-209ENST00000618856 ZNF528Q3MIS6 628 aa8.63□□□□□ -1.03
NEK3-209ENST00000618856 PTPN20Q4JDL3 420 aa8.63□□□□□ -1.03
NEK3-209ENST00000618856 FIGNQ5HY92 759 aa8.63□□□□□ -1.03
NEK3-209ENST00000618856 BTBD8Q5XKL5 378 aa8.63□□□□□ -1.03
NEK3-209ENST00000618856 NAIF1Q69YI7 327 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms