RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 EIF2S1P05198 315 aaKnown RBP11.3□□□□□ -0.6
POLR2A-209ENST00000617998 ZNF10P21506 573 aaPredicted RBP11.3□□□□□ -0.6
POLR2A-209ENST00000617998 DDX6P26196 483 aaKnown RBP eCLIP11.3□□□□□ -0.61e-9■■■■■ 28.9
POLR2A-209ENST00000617998 ZBED6P86452 979 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 XKR4Q5GH76 650 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 CALML6Q8TD86 181 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 AGPAT1Q99943 283 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 ACE2Q9BYF1 805 aaPredicted RBP11.3□□□□□ -0.6
POLR2A-209ENST00000617998 AGPAT3Q9NRZ7 376 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 A6NCN8 305 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 FAM86B1E9PN63 330 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 SERPINF2P08697 491 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 FAM86B2P0C5J1 330 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 SPDYAQ5MJ70 313 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 ANKRD20A3Q5VUR7 823 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 FAM47EQ6ZV65 393 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 ANKRD42Q8N9B4 389 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 CLIC5Q9NZA1 410 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 VANGL2Q9ULK5 521 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 FAM205CA6NFA0 338 aa11.29□□□□□ -0.6
POLR2A-209ENST00000617998 VIPP01282 170 aa11.29□□□□□ -0.6
POLR2A-209ENST00000617998 SESN2P58004 480 aaPredicted RBP11.29□□□□□ -0.6
POLR2A-209ENST00000617998 AMZ1Q400G9 498 aa11.29□□□□□ -0.6
POLR2A-209ENST00000617998 C11orf74Q86VG3 221 aa11.29□□□□□ -0.6
POLR2A-209ENST00000617998 C18orf25Q96B23 403 aaPredicted RBP11.29□□□□□ -0.6
POLR2A-209ENST00000617998 LRRIQ3A6PVS8 624 aaPredicted RBP11.29□□□□□ -0.6
POLR2A-209ENST00000617998 SLC31A1O15431 190 aa11.29□□□□□ -0.6
POLR2A-209ENST00000617998 ARIH2O95376 493 aa11.29□□□□□ -0.6
POLR2A-209ENST00000617998 ARL4CP56559 192 aa11.29□□□□□ -0.6
POLR2A-209ENST00000617998 C1orf131Q8NDD1 294 aaKnown RBP11.29□□□□□ -0.6
POLR2A-209ENST00000617998 TRIM9Q9C026 710 aa11.29□□□□□ -0.6
POLR2A-209ENST00000617998 PSD3Q9NYI0 1048 aa11.29□□□□□ -0.6
POLR2A-209ENST00000617998 SDHBP21912 280 aa11.29□□□□□ -0.6
POLR2A-209ENST00000617998 MAT2AP31153 395 aaKnown RBP11.29□□□□□ -0.6
POLR2A-209ENST00000617998 CYP4F8P98187 520 aa11.29□□□□□ -0.6
POLR2A-209ENST00000617998 TUBB2AQ13885 445 aa11.29□□□□□ -0.6
POLR2A-209ENST00000617998 RAP1GAP2Q684P5 730 aa11.29□□□□□ -0.6
POLR2A-209ENST00000617998 IL22RA1Q8N6P7 574 aa11.29□□□□□ -0.6
POLR2A-209ENST00000617998 TUBB2BQ9BVA1 445 aa11.29□□□□□ -0.6
POLR2A-209ENST00000617998 PRRG4Q9BZD6 226 aa11.29□□□□□ -0.6
POLR2A-209ENST00000617998 C8orf33Q9H7E9 229 aaPredicted RBP11.29□□□□□ -0.6
POLR2A-209ENST00000617998 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.29□□□□□ -0.68e-7■■■□□ 15.1
POLR2A-209ENST00000617998 ARL5CA6NH57 179 aa11.29□□□□□ -0.6
POLR2A-209ENST00000617998 TADA3O75528 432 aa11.29□□□□□ -0.6
POLR2A-209ENST00000617998 KCNA2P16389 499 aa11.29□□□□□ -0.6
POLR2A-209ENST00000617998 CSTF2P33240 577 aaKnown RBP eCLIP11.29□□□□□ -0.6
POLR2A-209ENST00000617998 MARC1Q5VT66 337 aa11.29□□□□□ -0.6
POLR2A-209ENST00000617998 RASGRP2Q7LDG7 609 aa11.29□□□□□ -0.6
POLR2A-209ENST00000617998 COLGALT1Q8NBJ5 622 aa11.29□□□□□ -0.6
POLR2A-209ENST00000617998 PPFIBP2Q8ND30 876 aa11.29□□□□□ -0.6
POLR2A-209ENST00000617998 UHMK1Q8TAS1 419 aaKnown RBP11.29□□□□□ -0.6
POLR2A-209ENST00000617998 PTPRN2Q92932 1015 aa11.29□□□□□ -0.6
POLR2A-209ENST00000617998 TXNRD2Q9NNW7 524 aa11.29□□□□□ -0.6
POLR2A-209ENST00000617998 DLL1O00548 723 aa11.29□□□□□ -0.6
POLR2A-209ENST00000617998 NRP1O14786 923 aa11.29□□□□□ -0.6
POLR2A-209ENST00000617998 HOXB2P14652 356 aa11.29□□□□□ -0.6
POLR2A-209ENST00000617998 HPDP32754 393 aaPredicted RBP11.29□□□□□ -0.6
POLR2A-209ENST00000617998 CASP7P55210 303 aa11.29□□□□□ -0.6
POLR2A-209ENST00000617998 RBM10P98175 930 aaKnown RBP11.29□□□□□ -0.6
POLR2A-209ENST00000617998 BRD3Q15059 726 aa11.29□□□□□ -0.6
POLR2A-209ENST00000617998 SH2D4BQ5SQS7 431 aa11.29□□□□□ -0.6
POLR2A-209ENST00000617998 PHYKPLQ8IUZ5 450 aa11.29□□□□□ -0.6
POLR2A-209ENST00000617998 RASGRP3Q8IV61 690 aa11.29□□□□□ -0.6
POLR2A-209ENST00000617998 CMTR2Q8IYT2 770 aaKnown RBP11.29□□□□□ -0.6
POLR2A-209ENST00000617998 TMEM60Q9H2L4 133 aa11.29□□□□□ -0.6
POLR2A-209ENST00000617998 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.29□□□□□ -0.6
POLR2A-209ENST00000617998 INVSQ9Y283 1065 aa11.29□□□□□ -0.6
POLR2A-209ENST00000617998 ADGRB1O14514 1584 aa11.29□□□□□ -0.6
POLR2A-209ENST00000617998 TRIM16O95361 564 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 LTFP02788 710 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 MT-ND3P03897 115 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 TCP1P17987 556 aaKnown RBP11.28□□□□□ -0.6
POLR2A-209ENST00000617998 FAM131BQ86XD5 332 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 SIX5Q8N196 739 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 C12orf76Q8N812 135 aaPredicted RBP11.28□□□□□ -0.6
POLR2A-209ENST00000617998 METTL21AQ8WXB1 218 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 BTBD1Q9H0C5 482 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 ATP13A3Q9H7F0 1226 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 NMRK1Q9NWW6 199 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 DNAJC28Q9NX36 388 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 SFMBT1Q9UHJ3 866 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 RCOR1Q9UKL0 485 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 SAR1BQ9Y6B6 198 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 PRNPP04156 253 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 GRM5P41594 1212 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 KIF19Q2TAC6 998 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 VARS2Q5ST30 1063 aaKnown RBP11.28□□□□□ -0.6
POLR2A-209ENST00000617998 VSTM1Q6UX27 236 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 FAM71BQ8TC56 605 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 TFB1MQ8WVM0 346 aaKnown RBP11.28□□□□□ -0.6
POLR2A-209ENST00000617998 SDCCAG3Q96C92 435 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 VPS11Q9H270 941 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 DNAJC11Q9NVH1 559 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 ARHGAP26Q9UNA1 814 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 USP20Q9Y2K6 914 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 DAAM1Q9Y4D1 1078 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 ANKS1BQ7Z6G8 1248 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 ARL14EPQ8N8R7 260 aaPredicted RBP11.28□□□□□ -0.6
POLR2A-209ENST00000617998 TSPAN17Q96FV3 270 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 PEX12O00623 359 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms