RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 PRCCQ92733 491 aaPredicted RBP18.23■□□□□ 0.51
CNOT3-209ENST00000617930 SCLYQ96I15 445 aa18.23■□□□□ 0.51
CNOT3-209ENST00000617930 KCNK16Q96T55 309 aa18.23■□□□□ 0.51
CNOT3-209ENST00000617930 CYLDQ9NQC7 956 aa18.23■□□□□ 0.51
CNOT3-209ENST00000617930 RGS18Q9NS28 235 aa18.23■□□□□ 0.51
CNOT3-209ENST00000617930 CTNNAL1Q9UBT7 734 aa18.23■□□□□ 0.51
CNOT3-209ENST00000617930 BANF1O75531 89 aa18.22■□□□□ 0.51
CNOT3-209ENST00000617930 COL6A1P12109 1028 aa18.22■□□□□ 0.51
CNOT3-209ENST00000617930 L1CAMP32004 1257 aa18.22■□□□□ 0.51
CNOT3-209ENST00000617930 SCNN1AP37088 669 aa18.22■□□□□ 0.51
CNOT3-209ENST00000617930 FAAP100Q0VG06 881 aa18.22■□□□□ 0.51
CNOT3-209ENST00000617930 CCDC121Q6ZUS5 278 aa18.22■□□□□ 0.51
CNOT3-209ENST00000617930 GPRIN1Q7Z2K8 1008 aa18.22■□□□□ 0.51
CNOT3-209ENST00000617930 DEFB106AQ8N104 65 aa18.22■□□□□ 0.51
CNOT3-209ENST00000617930 DBF4BQ8NFT6 615 aa18.22■□□□□ 0.51
CNOT3-209ENST00000617930 VWCEQ96DN2 955 aa18.22■□□□□ 0.51
CNOT3-209ENST00000617930 PCED1BQ96HM7 432 aa18.22■□□□□ 0.51
CNOT3-209ENST00000617930 SMOQ99835 787 aa18.22■□□□□ 0.51
CNOT3-209ENST00000617930 WDR83Q9BRX9 315 aaKnown RBP18.22■□□□□ 0.51
CNOT3-209ENST00000617930 RHOBTB2Q9BYZ6 727 aa18.22■□□□□ 0.51
CNOT3-209ENST00000617930 USP29Q9HBJ7 922 aa18.22■□□□□ 0.51
CNOT3-209ENST00000617930 TMPRSS4Q9NRS4 437 aa18.22■□□□□ 0.51
CNOT3-209ENST00000617930 NRP1O14786 923 aa18.22■□□□□ 0.51
CNOT3-209ENST00000617930 RASGRF2O14827 1237 aa18.22■□□□□ 0.51
CNOT3-209ENST00000617930 MDM4O15151 490 aa18.22■□□□□ 0.51
CNOT3-209ENST00000617930 ITGB1P05556 798 aa18.22■□□□□ 0.51
CNOT3-209ENST00000617930 FYNP06241 537 aa18.22■□□□□ 0.51
CNOT3-209ENST00000617930 FAM163BP0C2L3 166 aa18.22■□□□□ 0.51
CNOT3-209ENST00000617930 MAGEA4P43358 317 aa18.22■□□□□ 0.51
CNOT3-209ENST00000617930 BRCC3P46736 316 aa18.22■□□□□ 0.51
CNOT3-209ENST00000617930 MAP3K7CLP57077 242 aa18.22■□□□□ 0.51
CNOT3-209ENST00000617930 TRIM60Q495X7 471 aa18.22■□□□□ 0.51
CNOT3-209ENST00000617930 SYPL2Q5VXT5 272 aa18.22■□□□□ 0.51
CNOT3-209ENST00000617930 SLC9A4Q6AI14 798 aa18.22■□□□□ 0.51
CNOT3-209ENST00000617930 PYROXD2Q8N2H3 581 aa18.22■□□□□ 0.51
CNOT3-209ENST00000617930 CCHCR1Q8TD31 782 aa18.22■□□□□ 0.51
CNOT3-209ENST00000617930 FAF2Q96CS3 445 aa18.22■□□□□ 0.51
CNOT3-209ENST00000617930 FRMD8P1Q9BZ68 369 aaPredicted RBP18.22■□□□□ 0.51
CNOT3-209ENST00000617930 GOLGA8MH3BSY2 632 aa18.21■□□□□ 0.51
CNOT3-209ENST00000617930 CREB1P16220 341 aa18.21■□□□□ 0.51
CNOT3-209ENST00000617930 ACADSBP45954 432 aa18.21■□□□□ 0.51
CNOT3-209ENST00000617930 RAB27AP51159 221 aa18.21■□□□□ 0.51
CNOT3-209ENST00000617930 KRT81Q14533 505 aa18.21■□□□□ 0.51
CNOT3-209ENST00000617930 PDK2Q15119 407 aa18.21■□□□□ 0.51
CNOT3-209ENST00000617930 MSS51Q4VC12 460 aa18.21■□□□□ 0.51
CNOT3-209ENST00000617930 CCDC38Q502W7 563 aa18.21■□□□□ 0.51
CNOT3-209ENST00000617930 CLLU1OSQ5K130 101 aa18.21■□□□□ 0.51
CNOT3-209ENST00000617930 C6orf118Q5T5N4 469 aa18.21■□□□□ 0.51
CNOT3-209ENST00000617930 ERMARDQ5T6L9 678 aa18.21■□□□□ 0.51
CNOT3-209ENST00000617930 FBXO46Q6PJ61 603 aaPredicted RBP18.21■□□□□ 0.51
CNOT3-209ENST00000617930 BNIPLQ7Z465 357 aa18.21■□□□□ 0.51
CNOT3-209ENST00000617930 CYP4X1Q8N118 509 aa18.21■□□□□ 0.51
CNOT3-209ENST00000617930 NAT8LQ8N9F0 302 aa18.21■□□□□ 0.51
CNOT3-209ENST00000617930 SELENOSQ9BQE4 189 aa18.21■□□□□ 0.51
CNOT3-209ENST00000617930 SYT15Q9BQS2 421 aa18.21■□□□□ 0.51
CNOT3-209ENST00000617930 INPP5FQ9Y2H2 1132 aa18.21■□□□□ 0.51
CNOT3-209ENST00000617930 CTCFP49711 727 aaPredicted RBP18.2■□□□□ 0.5
CNOT3-209ENST00000617930 MRPS5P82675 430 aaKnown RBP18.2■□□□□ 0.5
CNOT3-209ENST00000617930 SLC10A2Q12908 348 aaPredicted RBP18.2■□□□□ 0.5
CNOT3-209ENST00000617930 MORF4L2Q15014 288 aa18.2■□□□□ 0.5
CNOT3-209ENST00000617930 PPP6R3Q5H9R7 873 aaPredicted RBP18.2■□□□□ 0.5
CNOT3-209ENST00000617930 FNBP1LQ5T0N5 605 aa18.2■□□□□ 0.5
CNOT3-209ENST00000617930 MFSD5Q6N075 450 aa18.2■□□□□ 0.5
CNOT3-209ENST00000617930 ANKRD33Q7Z3H0 272 aa18.2■□□□□ 0.5
CNOT3-209ENST00000617930 SUGP1Q8IWZ8 645 aaKnown RBP18.2■□□□□ 0.5
CNOT3-209ENST00000617930 CACNA2D3Q8IZS8 1091 aa18.2■□□□□ 0.5
CNOT3-209ENST00000617930 HASPINQ8TF76 798 aa18.2■□□□□ 0.5
CNOT3-209ENST00000617930 KCTD13Q8WZ19 329 aa18.2■□□□□ 0.5
CNOT3-209ENST00000617930 NT5C3BQ969T7 300 aa18.2■□□□□ 0.5
CNOT3-209ENST00000617930 ARMC5Q96C12 935 aa18.2■□□□□ 0.5
CNOT3-209ENST00000617930 CABS1Q96KC9 395 aa18.2■□□□□ 0.5
CNOT3-209ENST00000617930 KCTD15Q96SI1 283 aaPredicted RBP18.2■□□□□ 0.5
CNOT3-209ENST00000617930 MAK16Q9BXY0 300 aaKnown RBP18.2■□□□□ 0.5
CNOT3-209ENST00000617930 SAYSD1Q9NPB0 183 aa18.2■□□□□ 0.5
CNOT3-209ENST00000617930 KRT82Q9NSB4 513 aa18.2■□□□□ 0.5
CNOT3-209ENST00000617930 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.2■□□□□ 0.5
CNOT3-209ENST00000617930 MFHAS1Q9Y4C4 1052 aa18.2■□□□□ 0.5
CNOT3-209ENST00000617930 TSC2P49815 1807 aa18.2■□□□□ 0.5
CNOT3-209ENST00000617930 GOLGA6L7A0A1B0GV03 622 aa18.2■□□□□ 0.5
CNOT3-209ENST00000617930 RGS16O15492 202 aaPredicted RBP18.2■□□□□ 0.5
CNOT3-209ENST00000617930 TMEM63AO94886 807 aa18.2■□□□□ 0.5
CNOT3-209ENST00000617930 AMHP03971 560 aa18.2■□□□□ 0.5
CNOT3-209ENST00000617930 MATKP42679 507 aa18.2■□□□□ 0.5
CNOT3-209ENST00000617930 CCL23P55773 120 aa18.2■□□□□ 0.5
CNOT3-209ENST00000617930 SNX16P57768 344 aa18.2■□□□□ 0.5
CNOT3-209ENST00000617930 FAM189BP81408 668 aa18.2■□□□□ 0.5
CNOT3-209ENST00000617930 TLE2Q04725 743 aa18.2■□□□□ 0.5
CNOT3-209ENST00000617930 MTM1Q13496 603 aa18.2■□□□□ 0.5
CNOT3-209ENST00000617930 DPYSL2Q16555 572 aa18.2■□□□□ 0.5
CNOT3-209ENST00000617930 QPCTQ16769 361 aa18.2■□□□□ 0.5
CNOT3-209ENST00000617930 PLEKHG4Q58EX7 1191 aa18.2■□□□□ 0.5
CNOT3-209ENST00000617930 DSTYKQ6XUX3 929 aa18.2■□□□□ 0.5
CNOT3-209ENST00000617930 CPLX4Q7Z7G2 160 aa18.2■□□□□ 0.5
CNOT3-209ENST00000617930 RSAD2Q8WXG1 361 aa18.2■□□□□ 0.5
CNOT3-209ENST00000617930 PPP1R12CQ9BZL4 782 aa18.2■□□□□ 0.5
CNOT3-209ENST00000617930 HHLA1C9JL84 531 aa18.19■□□□□ 0.5
CNOT3-209ENST00000617930 GCAP28676 217 aa18.19■□□□□ 0.5
CNOT3-209ENST00000617930 HNRNPH1P31943 449 aaKnown RBP18.19■□□□□ 0.5
CNOT3-209ENST00000617930 RPL9P32969 192 aaKnown RBP18.19■□□□□ 0.5
CNOT3-209ENST00000617930 MMP13P45452 471 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms