RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 GTF2F1P35269 517 aaKnown RBP eCLIP8.42□□□□□ -1.06
TARDBP-219ENST00000617757 PPP3CCP48454 512 aa8.42□□□□□ -1.06
TARDBP-219ENST00000617757 TAS2R40P59535 323 aa8.42□□□□□ -1.06
TARDBP-219ENST00000617757 PITX1P78337 314 aaPredicted RBP8.42□□□□□ -1.06
TARDBP-219ENST00000617757 RBM10P98175 930 aaKnown RBP8.42□□□□□ -1.06
TARDBP-219ENST00000617757 ATP11AP98196 1134 aa8.42□□□□□ -1.06
TARDBP-219ENST00000617757 PRPF38BQ5VTL8 546 aaKnown RBP8.42□□□□□ -1.06
TARDBP-219ENST00000617757 STRADAQ7RTN6 431 aa8.42□□□□□ -1.06
TARDBP-219ENST00000617757 TMEM150AQ86TG1 271 aa8.42□□□□□ -1.06
TARDBP-219ENST00000617757 TMC8Q8IU68 726 aa8.42□□□□□ -1.06
TARDBP-219ENST00000617757 HS6ST3Q8IZP7 471 aa8.42□□□□□ -1.06
TARDBP-219ENST00000617757 ELMOD1Q8N336 334 aa8.42□□□□□ -1.06
TARDBP-219ENST00000617757 ZNF276Q8N554 614 aa8.42□□□□□ -1.06
TARDBP-219ENST00000617757 VN1R2Q8NFZ6 395 aa8.42□□□□□ -1.06
TARDBP-219ENST00000617757 UBE2Q2Q8WVN8 375 aa8.42□□□□□ -1.06
TARDBP-219ENST00000617757 ZNF592Q92610 1267 aa8.42□□□□□ -1.06
TARDBP-219ENST00000617757 PPP2R3CQ969Q6 453 aa8.42□□□□□ -1.06
TARDBP-219ENST00000617757 PGAP3Q96FM1 320 aaPredicted RBP8.42□□□□□ -1.06
TARDBP-219ENST00000617757 LRRC3Q9BY71 257 aa8.42□□□□□ -1.06
TARDBP-219ENST00000617757 PRDM12Q9H4Q4 367 aa8.42□□□□□ -1.06
TARDBP-219ENST00000617757 NSUN3Q9H649 340 aaKnown RBP8.42□□□□□ -1.06
TARDBP-219ENST00000617757 IL21Q9HBE4 155 aa8.42□□□□□ -1.06
TARDBP-219ENST00000617757 ZNF334Q9HCZ1 680 aaPredicted RBP8.42□□□□□ -1.06
TARDBP-219ENST00000617757 RRAGDQ9NQL2 400 aaPredicted RBP8.42□□□□□ -1.06
TARDBP-219ENST00000617757 TRPM5Q9NZQ8 1165 aa8.42□□□□□ -1.06
TARDBP-219ENST00000617757 NUDT5Q9UKK9 219 aa8.42□□□□□ -1.06
TARDBP-219ENST00000617757 PCDHA3Q9Y5H8 950 aa8.42□□□□□ -1.06
TARDBP-219ENST00000617757 DENND4AQ7Z401 1863 aa8.42□□□□□ -1.06
TARDBP-219ENST00000617757 MYO7AQ13402 2215 aa8.42□□□□□ -1.06
TARDBP-219ENST00000617757 DOCK4Q8N1I0 1966 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 SYNJ2BP-COX16A0A087WUM0 186 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 CCDC195A0A1B0GUA6 201 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 CCDC66A2RUB6 948 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 CTAGE9A4FU28 777 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 ZNF840PA6NDX5 716 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 MIF4GDA9UHW6 222 aaKnown RBP8.41□□□□□ -1.06
TARDBP-219ENST00000617757 SOX1O00570 391 aaPredicted RBP8.41□□□□□ -1.06
TARDBP-219ENST00000617757 DDX3YO15523 660 aaKnown RBP8.41□□□□□ -1.06
TARDBP-219ENST00000617757 PSTPIP1O43586 416 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 TADA3O75528 432 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 PAPLNO95428 1278 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 F9P00740 461 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 IGLV3-25P01717 112 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 POU2F2P09086 479 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 DESP17661 470 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 POU3F3P20264 500 aaPredicted RBP8.41□□□□□ -1.06
TARDBP-219ENST00000617757 MIPP30301 263 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 GBP1P32455 592 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 PCK1P35558 622 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 SSR1P43307 286 aaKnown RBP8.41□□□□□ -1.06
TARDBP-219ENST00000617757 MARCKSL1P49006 195 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 PEX5P50542 639 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 ATXN1P54253 815 aaKnown RBP8.41□□□□□ -1.06
TARDBP-219ENST00000617757 EPHA5P54756 1037 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 HDAC4P56524 1084 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 SLC25A11Q02978 314 aaKnown RBP8.41□□□□□ -1.06
TARDBP-219ENST00000617757 DEUP1Q05D60 604 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 HYAL1Q12794 435 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 EIF4EBP2Q13542 120 aaPredicted RBP8.41□□□□□ -1.06
TARDBP-219ENST00000617757 GRIN2CQ14957 1233 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 RPS6KA1Q15418 735 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 TCEAL5Q5H9L2 206 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 DNTTIP2Q5QJE6 756 aaKnown RBP8.41□□□□□ -1.06
TARDBP-219ENST00000617757 ZNF697Q5TEC3 545 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 PAPD7Q5XG87 772 aaKnown RBP8.41□□□□□ -1.06
TARDBP-219ENST00000617757 MSANTD2Q6P1R3 559 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 ELMSAN1Q6PJG2 1045 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 TMEM184AQ6ZMB5 413 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 TAC4Q86UU9 113 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 RHOT1Q8IXI2 618 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 UBL4BQ8N7F7 174 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 KIF18AQ8NI77 898 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 ADAM32Q8TC27 787 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 DQX1Q8TE96 717 aaKnown RBP8.41□□□□□ -1.06
TARDBP-219ENST00000617757 RNF139Q8WU17 664 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 KRT35Q92764 455 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 CASP10Q92851 521 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 ZNF707Q96C28 371 aaPredicted RBP8.41□□□□□ -1.06
TARDBP-219ENST00000617757 PEBP4Q96S96 227 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 NCAPGQ9BPX3 1015 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 CORO1BQ9BR76 489 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 PRKD2Q9BZL6 878 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 SMOC2Q9H3U7 446 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 IGFLR1Q9H665 355 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 CCSER2Q9H7U1 834 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 PIGVQ9NUD9 493 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 HCFC1R1Q9NWW0 138 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 ZDHHC7Q9NXF8 308 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 COX16Q9P0S2 106 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 DNMT3BQ9UBC3 853 aaKnown RBP8.41□□□□□ -1.06
TARDBP-219ENST00000617757 PCSK1NQ9UHG2 260 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 SFMBT1Q9UHJ3 866 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 USP18Q9UMW8 372 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 SNX12Q9UMY4 172 aa8.41□□□□□ -1.06
TARDBP-219ENST00000617757 REV3LO60673 3130 aa8.4□□□□□ -1.06
TARDBP-219ENST00000617757 MYO9BQ13459 2157 aa8.4□□□□□ -1.06
TARDBP-219ENST00000617757 MDM4O15151 490 aa8.4□□□□□ -1.06
TARDBP-219ENST00000617757 LINC01565O15544 149 aa8.4□□□□□ -1.06
TARDBP-219ENST00000617757 IRAK2O43187 625 aa8.4□□□□□ -1.06
TARDBP-219ENST00000617757 PRPSAP2O60256 369 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms