RNA–Protein interactions for RNA: ENST00000617209.1

SRGAP2C-205, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-205ENST00000617209 HOXD11P31277 338 aaPredicted RBP16.21■□□□□ 0.19
SRGAP2C-205ENST00000617209 CLCN1P35523 988 aa16.21■□□□□ 0.19
SRGAP2C-205ENST00000617209 USP8P40818 1118 aa16.21■□□□□ 0.19
SRGAP2C-205ENST00000617209 BPIFB4P59827 614 aa16.21■□□□□ 0.19
SRGAP2C-205ENST00000617209 GAD2Q05329 585 aa16.21■□□□□ 0.19
SRGAP2C-205ENST00000617209 KLHL40Q2TBA0 621 aa16.21■□□□□ 0.19
SRGAP2C-205ENST00000617209 LY6G5CQ5SRR4 150 aa16.21■□□□□ 0.19
SRGAP2C-205ENST00000617209 TMEM110Q86TL2 294 aa16.21■□□□□ 0.19
SRGAP2C-205ENST00000617209 NDRG1Q92597 394 aaKnown RBP16.21■□□□□ 0.19
SRGAP2C-205ENST00000617209 NAA15Q9BXJ9 866 aaKnown RBP16.21■□□□□ 0.19
SRGAP2C-205ENST00000617209 DCLK3Q9C098 648 aa16.21■□□□□ 0.19
SRGAP2C-205ENST00000617209 VPS16Q9H269 839 aa16.21■□□□□ 0.19
SRGAP2C-205ENST00000617209 ACP6Q9NPH0 428 aa16.21■□□□□ 0.19
SRGAP2C-205ENST00000617209 FAM86C1Q9NVL1 165 aa16.21■□□□□ 0.19
SRGAP2C-205ENST00000617209 TAB2Q9NYJ8 693 aa16.21■□□□□ 0.19
SRGAP2C-205ENST00000617209 MARCH2Q9P0N8 246 aa16.21■□□□□ 0.19
SRGAP2C-205ENST00000617209 STRIP2Q9ULQ0 834 aa16.21■□□□□ 0.19
SRGAP2C-205ENST00000617209 PCDHGC3Q9UN70 934 aa16.21■□□□□ 0.19
SRGAP2C-205ENST00000617209 WDR87Q6ZQQ6 2873 aa16.2■□□□□ 0.18
SRGAP2C-205ENST00000617209 PES1O00541 588 aaKnown RBP16.2■□□□□ 0.18
SRGAP2C-205ENST00000617209 MDM4O15151 490 aa16.2■□□□□ 0.18
SRGAP2C-205ENST00000617209 HOXC11O43248 304 aaPredicted RBP16.2■□□□□ 0.18
SRGAP2C-205ENST00000617209 SART1O43290 800 aaKnown RBP16.2■□□□□ 0.18
SRGAP2C-205ENST00000617209 EGFP01133 1207 aa16.2■□□□□ 0.18
SRGAP2C-205ENST00000617209 ADH5P11766 374 aa16.2■□□□□ 0.18
SRGAP2C-205ENST00000617209 TDGF1P13385 188 aa16.2■□□□□ 0.18
SRGAP2C-205ENST00000617209 UCHL3P15374 230 aa16.2■□□□□ 0.18
SRGAP2C-205ENST00000617209 PTMSP20962 102 aa16.2■□□□□ 0.18
SRGAP2C-205ENST00000617209 HOXA6P31267 233 aa16.2■□□□□ 0.18
SRGAP2C-205ENST00000617209 RGS7P49802 495 aa16.2■□□□□ 0.18
SRGAP2C-205ENST00000617209 NRLP54845 237 aa16.2■□□□□ 0.18
SRGAP2C-205ENST00000617209 CSTF1Q05048 431 aaKnown RBP16.2■□□□□ 0.18
SRGAP2C-205ENST00000617209 EFEMP1Q12805 493 aa16.2■□□□□ 0.18
SRGAP2C-205ENST00000617209 CAVIN1Q6NZI2 390 aaKnown RBP16.2■□□□□ 0.18
SRGAP2C-205ENST00000617209 DENND1BQ6P3S1 775 aa16.2■□□□□ 0.18
SRGAP2C-205ENST00000617209 ZC3H14Q6PJT7 736 aaKnown RBP16.2■□□□□ 0.18
SRGAP2C-205ENST00000617209 RSRC2Q7L4I2 434 aaKnown RBP16.2■□□□□ 0.18
SRGAP2C-205ENST00000617209 BEND5Q7L4P6 421 aa16.2■□□□□ 0.18
SRGAP2C-205ENST00000617209 TMEM25Q86YD3 366 aa16.2■□□□□ 0.18
SRGAP2C-205ENST00000617209 MIB1Q86YT6 1006 aa16.2■□□□□ 0.18
SRGAP2C-205ENST00000617209 ZBTB44Q8NCP5 570 aa16.2■□□□□ 0.18
SRGAP2C-205ENST00000617209 ANKRD20A12PQ8NF67 263 aa16.2■□□□□ 0.18
SRGAP2C-205ENST00000617209 RNF139Q8WU17 664 aa16.2■□□□□ 0.18
SRGAP2C-205ENST00000617209 EZH1Q92800 747 aaPredicted RBP16.2■□□□□ 0.18
SRGAP2C-205ENST00000617209 PHOX2BQ99453 314 aa16.2■□□□□ 0.18
SRGAP2C-205ENST00000617209 STK33Q9BYT3 514 aa16.2■□□□□ 0.18
SRGAP2C-205ENST00000617209 LHX5Q9H2C1 402 aa16.2■□□□□ 0.18
SRGAP2C-205ENST00000617209 HSD3B7Q9H2F3 369 aa16.2■□□□□ 0.18
SRGAP2C-205ENST00000617209 MARK1Q9P0L2 795 aa16.2■□□□□ 0.18
SRGAP2C-205ENST00000617209 AJAP1Q9UKB5 411 aaPredicted RBP16.2■□□□□ 0.18
SRGAP2C-205ENST00000617209 HBS1LQ9Y450 684 aaKnown RBP16.2■□□□□ 0.18
SRGAP2C-205ENST00000617209 DAAM1Q9Y4D1 1078 aa16.2■□□□□ 0.18
SRGAP2C-205ENST00000617209 RIF1Q5UIP0 2472 aaKnown RBP16.2■□□□□ 0.18
SRGAP2C-205ENST00000617209 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.19■□□□□ 0.18
SRGAP2C-205ENST00000617209 SCAMP3O14828 347 aaKnown RBP16.19■□□□□ 0.18
SRGAP2C-205ENST00000617209 LTFP02788 710 aa16.19■□□□□ 0.18
SRGAP2C-205ENST00000617209 KLKB1P03952 638 aa16.19■□□□□ 0.18
SRGAP2C-205ENST00000617209 IRF1P10914 325 aa16.19■□□□□ 0.18
SRGAP2C-205ENST00000617209 CHKAP35790 457 aa16.19■□□□□ 0.18
SRGAP2C-205ENST00000617209 COPB1P53618 953 aaKnown RBP16.19■□□□□ 0.18
SRGAP2C-205ENST00000617209 DRAP1Q14919 205 aaPredicted RBP16.19■□□□□ 0.18
SRGAP2C-205ENST00000617209 TRIP4Q15650 581 aaPredicted RBP16.19■□□□□ 0.18
SRGAP2C-205ENST00000617209 PREPLQ4J6C6 727 aaPredicted RBP16.19■□□□□ 0.18
SRGAP2C-205ENST00000617209 FKBP15Q5T1M5 1219 aa16.19■□□□□ 0.18
SRGAP2C-205ENST00000617209 NAIF1Q69YI7 327 aaPredicted RBP16.19■□□□□ 0.18
SRGAP2C-205ENST00000617209 MSANTD2Q6P1R3 559 aa16.19■□□□□ 0.18
SRGAP2C-205ENST00000617209 Q6ZS52 159 aa16.19■□□□□ 0.18
SRGAP2C-205ENST00000617209 SCUBE3Q8IX30 993 aa16.19■□□□□ 0.18
SRGAP2C-205ENST00000617209 ETFBKMTQ8IXQ9 262 aa16.19■□□□□ 0.18
SRGAP2C-205ENST00000617209 WDTC1Q8N5D0 677 aa16.19■□□□□ 0.18
SRGAP2C-205ENST00000617209 PLD4Q96BZ4 506 aa16.19■□□□□ 0.18
SRGAP2C-205ENST00000617209 PNKPQ96T60 521 aa16.19■□□□□ 0.18
SRGAP2C-205ENST00000617209 ZSCAN32Q9NX65 697 aa16.19■□□□□ 0.18
SRGAP2C-205ENST00000617209 WDR35Q9P2L0 1181 aa16.19■□□□□ 0.18
SRGAP2C-205ENST00000617209 RASAL2Q9UJF2 1139 aa16.19■□□□□ 0.18
SRGAP2C-205ENST00000617209 PCDHGA2Q9Y5H1 932 aa16.19■□□□□ 0.18
SRGAP2C-205ENST00000617209 KIAA1549LQ6ZVL6 1849 aa16.19■□□□□ 0.18
SRGAP2C-205ENST00000617209 CDK11BP21127 795 aaKnown RBP16.18■□□□□ 0.18
SRGAP2C-205ENST00000617209 MRE11P49959 708 aa16.18■□□□□ 0.18
SRGAP2C-205ENST00000617209 ANO6Q4KMQ2 910 aa16.18■□□□□ 0.18
SRGAP2C-205ENST00000617209 APTXQ7Z2E3 356 aaKnown RBP16.18■□□□□ 0.18
SRGAP2C-205ENST00000617209 EDEM1Q92611 657 aa16.18■□□□□ 0.18
SRGAP2C-205ENST00000617209 GOLGA1Q92805 767 aa16.18■□□□□ 0.18
SRGAP2C-205ENST00000617209 TRIM62Q9BVG3 475 aa16.18■□□□□ 0.18
SRGAP2C-205ENST00000617209 ST7Q9NRC1 585 aa16.18■□□□□ 0.18
SRGAP2C-205ENST00000617209 CYTH4Q9UIA0 394 aa16.18■□□□□ 0.18
SRGAP2C-205ENST00000617209 FHOD1Q9Y613 1164 aa16.18■□□□□ 0.18
SRGAP2C-205ENST00000617209 DMDP11532 3685 aa16.18■□□□□ 0.18
SRGAP2C-205ENST00000617209 MYO15AQ9UKN7 3530 aa16.18■□□□□ 0.18
SRGAP2C-205ENST00000617209 MYO18AQ92614 2054 aaKnown RBP16.17■□□□□ 0.18
SRGAP2C-205ENST00000617209 VPS13AQ96RL7 3174 aa16.17■□□□□ 0.18
SRGAP2C-205ENST00000617209 SLC12A8A0AV02 714 aa16.17■□□□□ 0.18
SRGAP2C-205ENST00000617209 SMTNL1A8MU46 457 aa16.17■□□□□ 0.18
SRGAP2C-205ENST00000617209 K7EQS6 105 aa16.17■□□□□ 0.18
SRGAP2C-205ENST00000617209 K7ESF4 209 aa16.17■□□□□ 0.18
SRGAP2C-205ENST00000617209 LILRB5O75023 590 aa16.17■□□□□ 0.18
SRGAP2C-205ENST00000617209 RNF40O75150 1001 aa16.17■□□□□ 0.18
SRGAP2C-205ENST00000617209 FYNP06241 537 aa16.17■□□□□ 0.18
SRGAP2C-205ENST00000617209 KRT9P35527 623 aa16.17■□□□□ 0.18
SRGAP2C-205ENST00000617209 GRIA2P42262 883 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms