RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 KIAA0319Q5VV43 1072 aa16.33■□□□□ 0.21
NR1H3-235ENST00000616973 AGMOQ6ZNB7 445 aa16.33■□□□□ 0.21
NR1H3-235ENST00000616973 LRRC34Q8IZ02 419 aa16.33■□□□□ 0.21
NR1H3-235ENST00000616973 CCDC185Q8N715 623 aa16.33■□□□□ 0.21
NR1H3-235ENST00000616973 FBXO36Q8NEA4 188 aa16.33■□□□□ 0.21
NR1H3-235ENST00000616973 KLHDC9Q8NEP7 349 aa16.33■□□□□ 0.21
NR1H3-235ENST00000616973 CKAP2Q8WWK9 683 aa16.33■□□□□ 0.21
NR1H3-235ENST00000616973 SGSM3Q96HU1 749 aa16.33■□□□□ 0.21
NR1H3-235ENST00000616973 CSPG4P5Q96PW8 444 aa16.33■□□□□ 0.21
NR1H3-235ENST00000616973 SLC2A13Q96QE2 648 aa16.33■□□□□ 0.21
NR1H3-235ENST00000616973 NPY6RQ99463 290 aa16.33■□□□□ 0.21
NR1H3-235ENST00000616973 DHRS4Q9BTZ2 278 aa16.33■□□□□ 0.21
NR1H3-235ENST00000616973 NSRP1Q9H0G5 558 aaKnown RBP16.33■□□□□ 0.21
NR1H3-235ENST00000616973 ACSS3Q9H6R3 686 aa16.33■□□□□ 0.21
NR1H3-235ENST00000616973 LRRC4Q9HBW1 653 aa16.33■□□□□ 0.21
NR1H3-235ENST00000616973 PSMC3IPQ9P2W1 217 aaPredicted RBP16.33■□□□□ 0.21
NR1H3-235ENST00000616973 USP3Q9Y6I4 520 aa16.33■□□□□ 0.21
NR1H3-235ENST00000616973 CLDN5O00501 218 aa16.33■□□□□ 0.2
NR1H3-235ENST00000616973 PRPF4O43172 522 aaKnown RBP eCLIP16.33■□□□□ 0.21e-6■■■□□ 14.9
NR1H3-235ENST00000616973 BEST1O76090 585 aa16.33■□□□□ 0.2
NR1H3-235ENST00000616973 FBXO21O94952 628 aa16.33■□□□□ 0.2
NR1H3-235ENST00000616973 FAM200BP0CF97 657 aa16.33■□□□□ 0.2
NR1H3-235ENST00000616973 ATP2A2P16615 1042 aaKnown RBP16.33■□□□□ 0.2
NR1H3-235ENST00000616973 CST5P28325 142 aaPredicted RBP16.33■□□□□ 0.2
NR1H3-235ENST00000616973 SULT1E1P49888 294 aa16.33■□□□□ 0.2
NR1H3-235ENST00000616973 SLC45A4Q5BKX6 768 aa16.33■□□□□ 0.2
NR1H3-235ENST00000616973 C3orf62Q6ZUJ4 267 aa16.33■□□□□ 0.2
NR1H3-235ENST00000616973 OTUD6BQ8N6M0 293 aa16.33■□□□□ 0.2
NR1H3-235ENST00000616973 DYDC1Q8WWB3 177 aa16.33■□□□□ 0.2
NR1H3-235ENST00000616973 HHIPL1Q96JK4 782 aa16.33■□□□□ 0.2
NR1H3-235ENST00000616973 CABS1Q96KC9 395 aa16.33■□□□□ 0.2
NR1H3-235ENST00000616973 SYT15Q9BQS2 421 aa16.33■□□□□ 0.2
NR1H3-235ENST00000616973 CRTAC1Q9NQ79 661 aa16.33■□□□□ 0.2
NR1H3-235ENST00000616973 NKIRAS1Q9NYS0 192 aa16.33■□□□□ 0.2
NR1H3-235ENST00000616973 CDH9Q9ULB4 789 aa16.33■□□□□ 0.2
NR1H3-235ENST00000616973 STAP1Q9ULZ2 295 aa16.33■□□□□ 0.2
NR1H3-235ENST00000616973 FOXO6A8MYZ6 492 aa16.32■□□□□ 0.2
NR1H3-235ENST00000616973 GCATO75600 419 aa16.32■□□□□ 0.2
NR1H3-235ENST00000616973 SPAG6O75602 509 aa16.32■□□□□ 0.2
NR1H3-235ENST00000616973 ALDH1A1P00352 501 aa16.32■□□□□ 0.2
NR1H3-235ENST00000616973 ASGR1P07306 291 aa16.32■□□□□ 0.2
NR1H3-235ENST00000616973 SSTR1P30872 391 aa16.32■□□□□ 0.2
NR1H3-235ENST00000616973 IFNAR2P48551 515 aa16.32■□□□□ 0.2
NR1H3-235ENST00000616973 CLCNKBP51801 687 aa16.32■□□□□ 0.2
NR1H3-235ENST00000616973 NRLP54845 237 aa16.32■□□□□ 0.2
NR1H3-235ENST00000616973 CACNB2Q08289 660 aaPredicted RBP16.32■□□□□ 0.2
NR1H3-235ENST00000616973 BBS9Q3SYG4 887 aa16.32■□□□□ 0.2
NR1H3-235ENST00000616973 OTUD1Q5VV17 481 aaPredicted RBP16.32■□□□□ 0.2
NR1H3-235ENST00000616973 PALM2Q8IXS6 379 aa16.32■□□□□ 0.2
NR1H3-235ENST00000616973 SIX6OS1Q8N1H7 587 aa16.32■□□□□ 0.2
NR1H3-235ENST00000616973 LPPQ93052 612 aa16.32■□□□□ 0.2
NR1H3-235ENST00000616973 FAM149B1Q96BN6 582 aa16.32■□□□□ 0.2
NR1H3-235ENST00000616973 MED10Q9BTT4 135 aa16.32■□□□□ 0.2
NR1H3-235ENST00000616973 KLC2Q9H0B6 622 aa16.32■□□□□ 0.2
NR1H3-235ENST00000616973 AGO3Q9H9G7 860 aaKnown RBP16.32■□□□□ 0.2
NR1H3-235ENST00000616973 SSU72Q9NP77 194 aaKnown RBP16.32■□□□□ 0.2
NR1H3-235ENST00000616973 XPNPEP3Q9NQH7 507 aa16.32■□□□□ 0.2
NR1H3-235ENST00000616973 RAB6BQ9NRW1 208 aa16.32■□□□□ 0.2
NR1H3-235ENST00000616973 PTCH2Q9Y6C5 1203 aa16.32■□□□□ 0.2
NR1H3-235ENST00000616973 TEX264Q9Y6I9 313 aa16.32■□□□□ 0.2
NR1H3-235ENST00000616973 PTPRDP23468 1912 aa16.31■□□□□ 0.2
NR1H3-235ENST00000616973 COL4A4P53420 1690 aaPredicted RBP16.31■□□□□ 0.2
NR1H3-235ENST00000616973 FAM47DPA6NHR8 397 aa16.31■□□□□ 0.2
NR1H3-235ENST00000616973 PAX3P23760 479 aa16.31■□□□□ 0.2
NR1H3-235ENST00000616973 IGFBP6P24592 240 aaPredicted RBP16.31■□□□□ 0.2
NR1H3-235ENST00000616973 ARL4AP40617 200 aa16.31■□□□□ 0.2
NR1H3-235ENST00000616973 IFT88Q13099 833 aa16.31■□□□□ 0.2
NR1H3-235ENST00000616973 DSC3Q14574 896 aa16.31■□□□□ 0.2
NR1H3-235ENST00000616973 ITIH4Q14624 930 aa16.31■□□□□ 0.2
NR1H3-235ENST00000616973 PKN2Q16513 984 aaKnown RBP16.31■□□□□ 0.2
NR1H3-235ENST00000616973 CCSAPQ6IQ19 270 aaPredicted RBP16.31■□□□□ 0.2
NR1H3-235ENST00000616973 ADGRD1Q6QNK2 874 aa16.31■□□□□ 0.2
NR1H3-235ENST00000616973 DSTYKQ6XUX3 929 aa16.31■□□□□ 0.2
NR1H3-235ENST00000616973 BZW1Q7L1Q6 419 aaKnown RBP16.31■□□□□ 0.2
NR1H3-235ENST00000616973 TAB3Q8N5C8 712 aaPredicted RBP16.31■□□□□ 0.2
NR1H3-235ENST00000616973 ANKRD42Q8N9B4 389 aa16.31■□□□□ 0.2
NR1H3-235ENST00000616973 CCDC197Q8NCU1 140 aa16.31■□□□□ 0.2
NR1H3-235ENST00000616973 MCUQ8NE86 351 aa16.31■□□□□ 0.2
NR1H3-235ENST00000616973 QKIQ96PU8 341 aaKnown RBP eCLIP16.31■□□□□ 0.2
NR1H3-235ENST00000616973 TRABDQ9H4I3 376 aa16.31■□□□□ 0.2
NR1H3-235ENST00000616973 KRT82Q9NSB4 513 aa16.31■□□□□ 0.2
NR1H3-235ENST00000616973 ETNK2Q9NVF9 386 aa16.31■□□□□ 0.2
NR1H3-235ENST00000616973 PADI3Q9ULW8 664 aa16.31■□□□□ 0.2
NR1H3-235ENST00000616973 SMG5Q9UPR3 1016 aaKnown RBP16.31■□□□□ 0.2
NR1H3-235ENST00000616973 PATJQ8NI35 1801 aa16.31■□□□□ 0.2
NR1H3-235ENST00000616973 HACD1B0YJ81 288 aa16.31■□□□□ 0.2
NR1H3-235ENST00000616973 C9IYK1 514 aa16.31■□□□□ 0.2
NR1H3-235ENST00000616973 ANKRD65E5RJM6 399 aa16.31■□□□□ 0.2
NR1H3-235ENST00000616973 TRIM66O15016 1216 aa16.31■□□□□ 0.2
NR1H3-235ENST00000616973 VIMP08670 466 aaKnown RBP16.31■□□□□ 0.2
NR1H3-235ENST00000616973 SCNN1GP51170 649 aa16.31■□□□□ 0.2
NR1H3-235ENST00000616973 AFF1P51825 1210 aaKnown RBP16.31■□□□□ 0.2
NR1H3-235ENST00000616973 AIF1P55008 147 aa16.31■□□□□ 0.2
NR1H3-235ENST00000616973 SLC10A2Q12908 348 aaPredicted RBP16.31■□□□□ 0.2
NR1H3-235ENST00000616973 LRRC14Q15048 493 aa16.31■□□□□ 0.2
NR1H3-235ENST00000616973 UPP1Q16831 310 aa16.31■□□□□ 0.2
NR1H3-235ENST00000616973 DCAF6Q58WW2 860 aa16.31■□□□□ 0.2
NR1H3-235ENST00000616973 RAB41Q5JT25 222 aa16.31■□□□□ 0.2
NR1H3-235ENST00000616973 NCBP2-AS2Q69YL0 99 aa16.31■□□□□ 0.2
NR1H3-235ENST00000616973 CAPN12Q6ZSI9 719 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms