RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 MAGEB16A2A368 324 aa18.23■□□□□ 0.51
ATXN2-227ENST00000616825 NCF1BA6NI72 391 aaPredicted RBP18.23■□□□□ 0.51
ATXN2-227ENST00000616825 NCF1CA8MVU1 366 aaPredicted RBP18.23■□□□□ 0.51
ATXN2-227ENST00000616825 NCF1P14598 390 aaPredicted RBP18.23■□□□□ 0.51
ATXN2-227ENST00000616825 TARSP26639 723 aaKnown RBP18.23■□□□□ 0.51
ATXN2-227ENST00000616825 OAZ1P54368 228 aa18.23■□□□□ 0.51
ATXN2-227ENST00000616825 SOX10P56693 466 aa18.23■□□□□ 0.51
ATXN2-227ENST00000616825 TLR8Q9NR97 1041 aaKnown RBP18.23■□□□□ 0.51
ATXN2-227ENST00000616825 TIMM13Q9Y5L4 95 aaPredicted RBP18.23■□□□□ 0.51
ATXN2-227ENST00000616825 CDC42BPAQ5VT25 1732 aa18.23■□□□□ 0.51
ATXN2-227ENST00000616825 MGAT4DA6NG13 374 aa18.23■□□□□ 0.51
ATXN2-227ENST00000616825 TRIM66O15016 1216 aa18.23■□□□□ 0.51
ATXN2-227ENST00000616825 RASSF9O75901 435 aa18.23■□□□□ 0.51
ATXN2-227ENST00000616825 DDHD2O94830 711 aa18.23■□□□□ 0.51
ATXN2-227ENST00000616825 CYP2F1P24903 491 aa18.23■□□□□ 0.51
ATXN2-227ENST00000616825 VHLP40337 213 aa18.23■□□□□ 0.51
ATXN2-227ENST00000616825 AMPD2Q01433 879 aa18.23■□□□□ 0.51
ATXN2-227ENST00000616825 RAMP2O60895 175 aa18.23■□□□□ 0.51
ATXN2-227ENST00000616825 HSPA13P48723 471 aa18.23■□□□□ 0.51
ATXN2-227ENST00000616825 LY6KQ17RY6 165 aa18.23■□□□□ 0.51
ATXN2-227ENST00000616825 SLC5A5Q92911 643 aa18.23■□□□□ 0.51
ATXN2-227ENST00000616825 FAM163AQ96GL9 167 aaPredicted RBP18.23■□□□□ 0.51
ATXN2-227ENST00000616825 GANQ9H2C0 597 aa18.23■□□□□ 0.51
ATXN2-227ENST00000616825 TBC1D23Q9NUY8 699 aa18.23■□□□□ 0.51
ATXN2-227ENST00000616825 UTP6Q9NYH9 597 aaKnown RBP18.23■□□□□ 0.51
ATXN2-227ENST00000616825 UBP1Q9NZI7 540 aa18.23■□□□□ 0.51
ATXN2-227ENST00000616825 ABCA6Q8N139 1617 aa18.23■□□□□ 0.51
ATXN2-227ENST00000616825 DDNO94850 711 aaPredicted RBP18.23■□□□□ 0.51
ATXN2-227ENST00000616825 SLITRK3O94933 977 aa18.23■□□□□ 0.51
ATXN2-227ENST00000616825 DARSP14868 501 aaKnown RBP18.23■□□□□ 0.51
ATXN2-227ENST00000616825 DEFA1P59665 94 aa18.23■□□□□ 0.51
ATXN2-227ENST00000616825 DEFA3P59666 94 aa18.23■□□□□ 0.51
ATXN2-227ENST00000616825 GALNTL6Q49A17 601 aa18.23■□□□□ 0.51
ATXN2-227ENST00000616825 TMEM154Q6P9G4 183 aa18.23■□□□□ 0.51
ATXN2-227ENST00000616825 OTOP1Q7RTM1 612 aa18.23■□□□□ 0.51
ATXN2-227ENST00000616825 PHACTR4Q8IZ21 702 aa18.23■□□□□ 0.51
ATXN2-227ENST00000616825 DNAJB3Q8WWF6 145 aa18.23■□□□□ 0.51
ATXN2-227ENST00000616825 SLC35C1Q96A29 364 aa18.23■□□□□ 0.51
ATXN2-227ENST00000616825 MAGEB18Q96M61 343 aa18.23■□□□□ 0.51
ATXN2-227ENST00000616825 ELOVL6Q9H5J4 265 aa18.23■□□□□ 0.51
ATXN2-227ENST00000616825 VTA1Q9NP79 307 aa18.23■□□□□ 0.51
ATXN2-227ENST00000616825 TBC1D13Q9NVG8 400 aa18.23■□□□□ 0.51
ATXN2-227ENST00000616825 LZTS1Q9Y250 596 aa18.23■□□□□ 0.51
ATXN2-227ENST00000616825 DNAJC16Q9Y2G8 782 aa18.23■□□□□ 0.51
ATXN2-227ENST00000616825 NRXN1Q9ULB1 1477 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 POMCP01189 267 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 ZNF286BP0CG31 522 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 TPBGLP0DKB5 382 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 PWP1Q13610 501 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 PHKG1Q16816 387 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 CYP51A1Q16850 503 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 OTOAQ7RTW8 1153 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 KIAA0895Q8NCT3 520 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 EDEM1Q92611 657 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 SH3GL1Q99961 368 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 MTG1Q9BT17 334 aaPredicted RBP18.22■□□□□ 0.51
ATXN2-227ENST00000616825 NDEL1Q9GZM8 345 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 TMCC3Q9ULS5 477 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 PCDHB12Q9Y5F1 795 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 XPO1O14980 1071 aaKnown RBP18.22■□□□□ 0.51
ATXN2-227ENST00000616825 PEX5P50542 639 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 CSHL1Q14406 222 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 ITIH5Q86UX2 942 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 CCDC60Q8IWA6 550 aaPredicted RBP18.22■□□□□ 0.51
ATXN2-227ENST00000616825 CDK5RAP1Q96SZ6 601 aaKnown RBP18.22■□□□□ 0.51
ATXN2-227ENST00000616825 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.22■□□□□ 0.51
ATXN2-227ENST00000616825 VANGL2Q9ULK5 521 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 SLC16A1P53985 500 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 PTENP60484 403 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 FUT11Q495W5 492 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 ERMARDQ5T6L9 678 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 TEX9Q8N6V9 391 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 IDI2Q9BXS1 227 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 IL17RBQ9NRM6 502 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 ZMYM2Q9UBW7 1377 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 ADAMTS13Q76LX8 1427 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 PDHXO00330 501 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 WNT10BO00744 389 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 TCF3P15923 654 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 SERPINB5P36952 375 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 AQP5P55064 265 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 CDH17Q12864 832 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 MAP1SQ66K74 1059 aaPredicted RBP18.22■□□□□ 0.51
ATXN2-227ENST00000616825 ZDHHC17Q8IUH5 632 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 HERC6Q8IVU3 1022 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 FBXL16Q8N461 479 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 WDR48Q8TAF3 677 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 CAPN10Q9HC96 672 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 SLC40A1Q9NP59 571 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 KCNQ5Q9NR82 932 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 DYRK1BQ9Y463 629 aa18.22■□□□□ 0.51
ATXN2-227ENST00000616825 TOMM70O94826 608 aa18.21■□□□□ 0.51
ATXN2-227ENST00000616825 VIL1P09327 827 aaKnown RBP18.21■□□□□ 0.51
ATXN2-227ENST00000616825 GHRP10912 638 aa18.21■□□□□ 0.51
ATXN2-227ENST00000616825 ACADSP16219 412 aa18.21■□□□□ 0.51
ATXN2-227ENST00000616825 DNAJB2P25686 324 aa18.21■□□□□ 0.51
ATXN2-227ENST00000616825 WEE1P30291 646 aa18.21■□□□□ 0.51
ATXN2-227ENST00000616825 RFX3P48380 749 aa18.21■□□□□ 0.51
ATXN2-227ENST00000616825 ATP6AP1LQ52LC2 224 aa18.21■□□□□ 0.51
ATXN2-227ENST00000616825 SLC30A10Q6XR72 485 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms