RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 NHSL1Q5SYE7 1610 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 SDR42E2A6NKP2 422 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 SPAG7O75391 227 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 RHOBTB1O94844 696 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 MAP3K6O95382 1288 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 CHRM3P20309 590 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 WEE1P30291 646 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 NR2C2P49116 596 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 MKRN4PQ13434 485 aaPredicted RBP9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 MTFR1Q15390 333 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 FAXCQ5TGI0 409 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 C9orf57Q5W0N0 161 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 DENND1BQ6P3S1 775 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 WDR59Q6PJI9 974 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 ATG4AQ8WYN0 398 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 SHC3Q92529 594 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 KAT5Q92993 513 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 LENG1Q96BZ8 264 aaPredicted RBP9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 OXCT2Q9BYC2 517 aaPredicted RBP9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 Q9H521 79 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 RBM22Q9NW64 420 aaKnown RBP eCLIP9.75□□□□□ -0.855e-6■■■■□ 22.4
CLTCL1-208ENST00000615606 RWDD3Q9Y3V2 267 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 GNGT2O14610 69 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 TSPAN3O60637 253 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 SERPINF2P08697 491 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 ITGALP20701 1170 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 HMOX2P30519 316 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 ACLYP53396 1101 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 NYAP1Q6ZVC0 841 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 PDCD7Q8N8D1 485 aaKnown RBP9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 MBOAT7Q96N66 472 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 TGS1Q96RS0 853 aaKnown RBP9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 LRRC40Q9H9A6 602 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 VCX3AQ9NNX9 186 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 MORF4L1Q9UBU8 362 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 DNMT3LQ9UJW3 386 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 SMIM28A0A1B0GU29 152 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 CFLARO15519 480 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 TSPAN1O60635 241 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 ANP32DO95626 131 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 ACADMP11310 421 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 IFNA8P32881 189 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 GLUD2P49448 558 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 GRB14Q14449 540 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 MEA1Q16626 185 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 KYNUQ16719 465 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 TTC39BQ5VTQ0 682 aaPredicted RBP9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 PAPD7Q5XG87 772 aaKnown RBP9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 DSG4Q86SJ6 1040 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 NUP93Q8N1F7 819 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 ACTL9Q8TC94 416 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 TASP1Q9H6P5 420 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 VIPAS39Q9H9C1 493 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 MRPS23Q9Y3D9 190 aaKnown RBP9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 RPS6KL1Q9Y6S9 549 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 HEATR9A2RTY3 570 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 SIGLEC16A6NMB1 481 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 DIAPH2O60879 1101 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 LGR5O75473 907 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 CXCL14O95715 111 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 TBX2Q13207 712 aaPredicted RBP9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 CCL14Q16627 93 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 PIGZQ86VD9 579 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 DDIASQ8IXT1 998 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 HS6ST3Q8IZP7 471 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 SPPL2BQ8TCT7 592 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 TEPSINQ96N21 525 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 TRIM15Q9C019 465 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 TKTL2Q9H0I9 626 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 PDZD7Q9H5P4 517 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 MLXIPLQ9NP71 852 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 SPECC1L-ADORA2AF8WAN1 911 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 CYP3A5P20815 502 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 MORF4L2Q15014 288 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 ARMC6Q6NXE6 501 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 TFAP2DQ7Z6R9 452 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 ADAM32Q8TC27 787 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 BSNDQ8WZ55 320 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 UPF3AQ9H1J1 476 aaKnown RBP9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 SLC28A3Q9HAS3 691 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 WHRNQ9P202 907 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 TRHDEQ9UKU6 1024 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 PRPF4O43172 522 aaKnown RBP eCLIP9.74□□□□□ -0.851e-9■■■■■ 32.7
CLTCL1-208ENST00000615606 ZNF862O60290 1169 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 ENDOD1O94919 500 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 KITP10721 976 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 MIPP30301 263 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 SLC8A1P32418 973 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 SCNN1BP51168 640 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 ARFIP2P53365 341 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 MARSP56192 900 aaKnown RBP9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 PPWD1Q96BP3 646 aaKnown RBP9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 GRAMD1AQ96CP6 724 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 FICDQ9BVA6 458 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 USH1CQ9Y6N9 552 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 PRR23AA6NEV1 266 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 HACD1B0YJ81 288 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 FGF10O15520 208 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms