RNA–Protein interactions for RNA: ENST00000615096.4

SCUBE1-208, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 2 BASIC

Gene SCUBE1, Length 1,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-208ENST00000615096 RNF139Q8WU17 664 aa23.2■■□□□ 1.3
SCUBE1-208ENST00000615096 USP13Q92995 863 aaPredicted RBP23.2■■□□□ 1.3
SCUBE1-208ENST00000615096 ZFRQ96KR1 1074 aaKnown RBP23.2■■□□□ 1.3
SCUBE1-208ENST00000615096 SMG9Q9H0W8 520 aaKnown RBP23.2■■□□□ 1.3
SCUBE1-208ENST00000615096 METTL5Q9NRN9 209 aaKnown RBP23.2■■□□□ 1.3
SCUBE1-208ENST00000615096 TDP1Q9NUW8 608 aa23.2■■□□□ 1.3
SCUBE1-208ENST00000615096 DNMT3LQ9UJW3 386 aa23.2■■□□□ 1.3
SCUBE1-208ENST00000615096 ARHGAP26Q9UNA1 814 aa23.2■■□□□ 1.3
SCUBE1-208ENST00000615096 ANKRD62A6NC57 917 aa23.19■■□□□ 1.3
SCUBE1-208ENST00000615096 SIGLEC16A6NMB1 481 aa23.19■■□□□ 1.3
SCUBE1-208ENST00000615096 EIF3CLB5ME19 914 aaKnown RBP23.19■■□□□ 1.3
SCUBE1-208ENST00000615096 ANHXE9PGG2 379 aa23.19■■□□□ 1.3
SCUBE1-208ENST00000615096 ATMINO43313 823 aaPredicted RBP23.19■■□□□ 1.3
SCUBE1-208ENST00000615096 GJB6O95452 261 aa23.19■■□□□ 1.3
SCUBE1-208ENST00000615096 MBL2P11226 248 aaPredicted RBP23.19■■□□□ 1.3
SCUBE1-208ENST00000615096 TRNP1Q6NT89 227 aa23.19■■□□□ 1.3
SCUBE1-208ENST00000615096 JOSD2Q8TAC2 188 aa23.19■■□□□ 1.3
SCUBE1-208ENST00000615096 ZNF653Q96CK0 615 aa23.19■■□□□ 1.3
SCUBE1-208ENST00000615096 EIF3CQ99613 913 aaKnown RBP23.19■■□□□ 1.3
SCUBE1-208ENST00000615096 SELENOOQ9BVL4 669 aa23.19■■□□□ 1.3
SCUBE1-208ENST00000615096 PACSIN1Q9BY11 444 aa23.19■■□□□ 1.3
SCUBE1-208ENST00000615096 THAP2Q9H0W7 228 aa23.19■■□□□ 1.3
SCUBE1-208ENST00000615096 CNOT8Q9UFF9 292 aaKnown RBP23.19■■□□□ 1.3
SCUBE1-208ENST00000615096 CCL26Q9Y258 94 aa23.19■■□□□ 1.3
SCUBE1-208ENST00000615096 CPQQ9Y646 472 aa23.19■■□□□ 1.3
SCUBE1-208ENST00000615096 EPN1Q9Y6I3 576 aaPredicted RBP23.19■■□□□ 1.3
SCUBE1-208ENST00000615096 CAPN9O14815 690 aa23.18■■□□□ 1.3
SCUBE1-208ENST00000615096 NDUFA10O95299 355 aa23.18■■□□□ 1.3
SCUBE1-208ENST00000615096 KRT3P12035 628 aa23.18■■□□□ 1.3
SCUBE1-208ENST00000615096 ABCB4P21439 1286 aa23.18■■□□□ 1.3
SCUBE1-208ENST00000615096 NOS2P35228 1153 aa23.18■■□□□ 1.3
SCUBE1-208ENST00000615096 FLT3P36888 993 aa23.18■■□□□ 1.3
SCUBE1-208ENST00000615096 MATKP42679 507 aa23.18■■□□□ 1.3
SCUBE1-208ENST00000615096 RNASE9P60153 205 aaKnown RBP23.18■■□□□ 1.3
SCUBE1-208ENST00000615096 EFEMP1Q12805 493 aa23.18■■□□□ 1.3
SCUBE1-208ENST00000615096 MAMLD1Q13495 774 aa23.18■■□□□ 1.3
SCUBE1-208ENST00000615096 DCAF6Q58WW2 860 aa23.18■■□□□ 1.3
SCUBE1-208ENST00000615096 TANGO2Q6ICL3 276 aa23.18■■□□□ 1.3
SCUBE1-208ENST00000615096 DNAJC24Q6P3W2 148 aa23.18■■□□□ 1.3
SCUBE1-208ENST00000615096 PARM1Q6UWI2 310 aa23.18■■□□□ 1.3
SCUBE1-208ENST00000615096 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.18■■□□□ 1.3
SCUBE1-208ENST00000615096 DQX1Q8TE96 717 aaKnown RBP23.18■■□□□ 1.3
SCUBE1-208ENST00000615096 FGF14Q92915 247 aa23.18■■□□□ 1.3
SCUBE1-208ENST00000615096 RSPRY1Q96DX4 576 aa23.18■■□□□ 1.3
SCUBE1-208ENST00000615096 DDX23Q9BUQ8 820 aaKnown RBP23.18■■□□□ 1.3
SCUBE1-208ENST00000615096 KLF16Q9BXK1 252 aaPredicted RBP23.18■■□□□ 1.3
SCUBE1-208ENST00000615096 NACA2Q9H009 215 aa23.18■■□□□ 1.3
SCUBE1-208ENST00000615096 PARVAQ9NVD7 372 aa23.18■■□□□ 1.3
SCUBE1-208ENST00000615096 MARCH2Q9P0N8 246 aa23.18■■□□□ 1.3
SCUBE1-208ENST00000615096 RASAL2Q9UJF2 1139 aa23.18■■□□□ 1.3
SCUBE1-208ENST00000615096 DOCK8Q8NF50 2099 aa23.18■■□□□ 1.3
SCUBE1-208ENST00000615096 C19orf67A6NJJ6 358 aa23.17■■□□□ 1.3
SCUBE1-208ENST00000615096 H2AFZP0C0S5 128 aa23.17■■□□□ 1.3
SCUBE1-208ENST00000615096 TCF3P15923 654 aa23.17■■□□□ 1.3
SCUBE1-208ENST00000615096 RFC1P35251 1148 aaPredicted RBP23.17■■□□□ 1.3
SCUBE1-208ENST00000615096 VIPR2P41587 438 aa23.17■■□□□ 1.3
SCUBE1-208ENST00000615096 GPC5P78333 572 aa23.17■■□□□ 1.3
SCUBE1-208ENST00000615096 PITX1P78337 314 aaPredicted RBP23.17■■□□□ 1.3
SCUBE1-208ENST00000615096 HTR4Q13639 388 aa23.17■■□□□ 1.3
SCUBE1-208ENST00000615096 C10orf76Q5T2E6 689 aa23.17■■□□□ 1.3
SCUBE1-208ENST00000615096 H2AFVQ71UI9 128 aa23.17■■□□□ 1.3
SCUBE1-208ENST00000615096 MTSS1LQ765P7 747 aa23.17■■□□□ 1.3
SCUBE1-208ENST00000615096 CELF5Q8N6W0 485 aaKnown RBP23.17■■□□□ 1.3
SCUBE1-208ENST00000615096 EMC1Q8N766 993 aa23.17■■□□□ 1.3
SCUBE1-208ENST00000615096 ST13P5Q8NFI4 369 aaPredicted RBP23.17■■□□□ 1.3
SCUBE1-208ENST00000615096 RIN3Q8TB24 985 aa23.17■■□□□ 1.3
SCUBE1-208ENST00000615096 ADAMTS19Q8TE59 1207 aa23.17■■□□□ 1.3
SCUBE1-208ENST00000615096 NT5C3BQ969T7 300 aa23.17■■□□□ 1.3
SCUBE1-208ENST00000615096 SMOC2Q9H3U7 446 aa23.17■■□□□ 1.3
SCUBE1-208ENST00000615096 KIF9Q9HAQ2 790 aa23.17■■□□□ 1.3
SCUBE1-208ENST00000615096 ZFP14Q9HCL3 533 aa23.17■■□□□ 1.3
SCUBE1-208ENST00000615096 GKN1Q9NS71 199 aa23.17■■□□□ 1.3
SCUBE1-208ENST00000615096 SMPD4Q9NXE4 827 aa23.17■■□□□ 1.3
SCUBE1-208ENST00000615096 OBP2AQ9NY56 170 aa23.17■■□□□ 1.3
SCUBE1-208ENST00000615096 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.17■■□□□ 1.3
SCUBE1-208ENST00000615096 SFMBT1Q9UHJ3 866 aa23.17■■□□□ 1.3
SCUBE1-208ENST00000615096 NUP210Q8TEM1 1887 aaPredicted RBP23.17■■□□□ 1.3
SCUBE1-208ENST00000615096 C2CD4BA6NLJ0 364 aa23.16■■□□□ 1.3
SCUBE1-208ENST00000615096 IGLV3-25P01717 112 aa23.16■■□□□ 1.3
SCUBE1-208ENST00000615096 CYP1A2P05177 515 aa23.16■■□□□ 1.3
SCUBE1-208ENST00000615096 EIF4EBP2Q13542 120 aaPredicted RBP23.16■■□□□ 1.3
SCUBE1-208ENST00000615096 MIB1Q86YT6 1006 aa23.16■■□□□ 1.3
SCUBE1-208ENST00000615096 CCDC112Q8NEF3 446 aa23.16■■□□□ 1.3
SCUBE1-208ENST00000615096 SH3RF2Q8TEC5 729 aa23.16■■□□□ 1.3
SCUBE1-208ENST00000615096 E2F7Q96AV8 911 aa23.16■■□□□ 1.3
SCUBE1-208ENST00000615096 ELSPBP1Q96BH3 223 aa23.16■■□□□ 1.3
SCUBE1-208ENST00000615096 ARHGEF26Q96DR7 871 aa23.16■■□□□ 1.3
SCUBE1-208ENST00000615096 LRRC3BQ96PB8 259 aa23.16■■□□□ 1.3
SCUBE1-208ENST00000615096 NPY6RQ99463 290 aa23.16■■□□□ 1.3
SCUBE1-208ENST00000615096 MYO1AQ9UBC5 1043 aa23.16■■□□□ 1.3
SCUBE1-208ENST00000615096 LIMD1Q9UGP4 676 aa23.16■■□□□ 1.3
SCUBE1-208ENST00000615096 SPTBN5Q9NRC6 3674 aaKnown RBP23.15■■□□□ 1.3
SCUBE1-208ENST00000615096 LEFTY2O00292 366 aa23.15■■□□□ 1.3
SCUBE1-208ENST00000615096 ECI2O75521 394 aa23.15■■□□□ 1.3
SCUBE1-208ENST00000615096 TMEM253P0C7T8 217 aa23.15■■□□□ 1.3
SCUBE1-208ENST00000615096 RPL7AP62424 266 aaKnown RBP23.15■■□□□ 1.3
SCUBE1-208ENST00000615096 USP4Q13107 963 aa23.15■■□□□ 1.3
SCUBE1-208ENST00000615096 ZNF77Q15935 545 aa23.15■■□□□ 1.3
SCUBE1-208ENST00000615096 OTUD1Q5VV17 481 aaPredicted RBP23.15■■□□□ 1.3
SCUBE1-208ENST00000615096 VITQ6UXI7 678 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms