RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 PQLC3Q8N755 202 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 PLD5Q8N7P1 536 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 CCNYQ8ND76 341 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 SLAIN1Q8ND83 568 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 MYCBPAPQ8TBZ2 947 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 MGARPQ8TDB4 240 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 DIS3LQ8TF46 1054 aaKnown RBP3.58□□□□□ -1.84
LIG4-205ENST00000614526 FAXDC2Q96IV6 333 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 ATP6V1G3Q96LB4 118 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 KCTD15Q96SI1 283 aaPredicted RBP3.58□□□□□ -1.84
LIG4-205ENST00000614526 LGMNQ99538 433 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 SH3GL2Q99962 352 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 SELENOSQ9BQE4 189 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 TRIM56Q9BRZ2 755 aaKnown RBP3.58□□□□□ -1.84
LIG4-205ENST00000614526 TRAIPQ9BWF2 469 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 GPR62Q9BZJ7 368 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 VPS37BQ9H9H4 285 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 TMBIM4Q9HC24 238 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 PPANQ9NQ55 473 aaKnown RBP3.58□□□□□ -1.84
LIG4-205ENST00000614526 ANLNQ9NQW6 1124 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.58□□□□□ -1.848e-10■■■■■ 70.3
LIG4-205ENST00000614526 CWC15Q9P013 229 aaKnown RBP3.58□□□□□ -1.84
LIG4-205ENST00000614526 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.58□□□□□ -1.84
LIG4-205ENST00000614526 SFMBT1Q9UHJ3 866 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 LRFN2Q9ULH4 789 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 ATP11BQ9Y2G3 1177 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 TBKBP1A7MCY6 615 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 GOLGA8KD6RF30 607 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 I6L893 689 aaPredicted RBP3.57□□□□□ -1.84
LIG4-205ENST00000614526 ENPP3O14638 875 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 APOL1O14791 398 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 MDM4O15151 490 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 MSI1O43347 362 aaKnown RBP3.57□□□□□ -1.84
LIG4-205ENST00000614526 ZBED1O96006 694 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 SELPP16109 830 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 DESP17661 470 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 NR1D1P20393 614 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 PCSK1P29120 753 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 L1CAMP32004 1257 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 MATKP42679 507 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 ACADSBP45954 432 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 SEC24CP53992 1094 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 DRG2P55039 364 aaKnown RBP3.57□□□□□ -1.84
LIG4-205ENST00000614526 COPS2P61201 443 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 GRIK3Q13003 919 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 PDIA2Q13087 525 aaKnown RBP3.57□□□□□ -1.84
LIG4-205ENST00000614526 MTMR3Q13615 1198 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 MSS51Q4VC12 460 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 EFHC1Q5JVL4 640 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 TAS1R1Q7RTX1 841 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 ZNF598Q86UK7 904 aaKnown RBP3.57□□□□□ -1.84
LIG4-205ENST00000614526 SPATA2LQ8IUW3 424 aaPredicted RBP3.57□□□□□ -1.84
LIG4-205ENST00000614526 SLC35B2Q8TB61 432 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 HSFY1Q96LI6 401 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 RAB6BQ9NRW1 208 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 RGS18Q9NS28 235 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 HOMER3Q9NSC5 361 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 CDH9Q9ULB4 789 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 TPX2Q9ULW0 747 aaKnown RBP3.57□□□□□ -1.84
LIG4-205ENST00000614526 PCDHB7Q9Y5E2 793 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 MYO7AQ13402 2215 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 APOC4-APOC2K7ER74 178 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 KCNK1O00180 336 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 DNALI1O14645 258 aaPredicted RBP3.57□□□□□ -1.84
LIG4-205ENST00000614526 RASGRF2O14827 1237 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 RGS16O15492 202 aaPredicted RBP3.57□□□□□ -1.84
LIG4-205ENST00000614526 TBX18O95935 607 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 APOC2P02655 101 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 LTFP02788 710 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 HMBSP08397 361 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 CCL5P13501 91 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 RARGP13631 454 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 SSTR1P30872 391 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 RPL9P32969 192 aaKnown RBP3.57□□□□□ -1.84
LIG4-205ENST00000614526 MAGEA4P43358 317 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 RAB27AP51159 221 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 SNX16P57768 344 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 DAOAP59103 153 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 TSPY1Q01534 308 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 ROR1Q01973 937 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 TLE2Q04725 743 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 AP1B1Q10567 949 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 LRRC14Q15048 493 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 GLIPR1L2Q4G1C9 344 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 INTS6LQ5JSJ4 861 aaKnown RBP3.57□□□□□ -1.84
LIG4-205ENST00000614526 FNBP1LQ5T0N5 605 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 SPOUT1Q5T280 376 aaKnown RBP3.57□□□□□ -1.84
LIG4-205ENST00000614526 DCLRE1AQ6PJP8 1040 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 KCNT2Q6UVM3 1135 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.57□□□□□ -1.84
LIG4-205ENST00000614526 LIMS2Q7Z4I7 341 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 RPAINQ86UA6 219 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 TAX1BP1Q86VP1 789 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 THEM5Q8N1Q8 247 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 URGCPQ8TCY9 931 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 STK32AQ8WU08 396 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 FAF2Q96CS3 445 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 CELF6Q96J87 481 aaKnown RBP3.57□□□□□ -1.84
LIG4-205ENST00000614526 CSPG4P5Q96PW8 444 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 CAPS2Q9BXY5 557 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms