RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 NUB1Q9Y5A7 615 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 CAPN14A8MX76 684 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 MCF2LO15068 1137 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 FKBP6O75344 327 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 KRT37O76014 449 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 STIP1P31948 543 aaKnown RBP11.64□□□□□ -0.55
ATF3-211ENST00000613954 ACOT2P49753 483 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 GDF10P55107 478 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 ACTR3P61158 418 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 CRHR2Q13324 411 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 NCOA4Q13772 614 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 TXNRD3NBQ6F5E7 133 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 SLC26A11Q86WA9 606 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 LINC01465Q8N7H1 131 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 SERAC1Q96JX3 654 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 APBA2Q99767 749 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 ACO2Q99798 780 aaKnown RBP11.64□□□□□ -0.55
ATF3-211ENST00000613954 SIKE1Q9BRV8 207 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 NFKBIZQ9BYH8 718 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 NMUR2Q9GZQ4 415 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 GPBP1L1Q9HC44 474 aaPredicted RBP11.64□□□□□ -0.55
ATF3-211ENST00000613954 ALG13Q9NP73 1137 aaKnown RBP11.64□□□□□ -0.55
ATF3-211ENST00000613954 NDE1Q9NXR1 346 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 FLRT1Q9NZU1 646 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 TAGLN3Q9UI15 199 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 ZNF180Q9UJW8 692 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 PCDHGC3Q9UN70 934 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 SORCS3Q9UPU3 1222 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.64□□□□□ -0.55
ATF3-211ENST00000613954 TCRBV9S1A1TA0A576 114 aa11.63□□□□□ -0.55
ATF3-211ENST00000613954 H3BRJ5 948 aa11.63□□□□□ -0.55
ATF3-211ENST00000613954 APOC4-APOC2K7ER74 178 aa11.63□□□□□ -0.55
ATF3-211ENST00000613954 TNPO2O14787 897 aaKnown RBP11.63□□□□□ -0.55
ATF3-211ENST00000613954 ADCY6O43306 1168 aa11.63□□□□□ -0.55
ATF3-211ENST00000613954 TOM1L1O75674 476 aa11.63□□□□□ -0.55
ATF3-211ENST00000613954 AP1G2O75843 785 aa11.63□□□□□ -0.55
ATF3-211ENST00000613954 TMEM63AO94886 807 aa11.63□□□□□ -0.55
ATF3-211ENST00000613954 APOC2P02655 101 aa11.63□□□□□ -0.55
ATF3-211ENST00000613954 ZNF865P0CJ78 1059 aaPredicted RBP11.63□□□□□ -0.55
ATF3-211ENST00000613954 PYGBP11216 843 aa11.63□□□□□ -0.55
ATF3-211ENST00000613954 ANPEPP15144 967 aa11.63□□□□□ -0.55
ATF3-211ENST00000613954 CYP2B6P20813 491 aa11.63□□□□□ -0.55
ATF3-211ENST00000613954 KDELR1P24390 212 aa11.63□□□□□ -0.55
ATF3-211ENST00000613954 PSMA2P25787 234 aa11.63□□□□□ -0.55
ATF3-211ENST00000613954 CRABP2P29373 138 aa11.63□□□□□ -0.55
ATF3-211ENST00000613954 SSTR3P32745 418 aaPredicted RBP11.63□□□□□ -0.55
ATF3-211ENST00000613954 ELK3P41970 407 aa11.63□□□□□ -0.55
ATF3-211ENST00000613954 POLE2P56282 527 aa11.63□□□□□ -0.55
ATF3-211ENST00000613954 DYNLT1P63172 113 aa11.63□□□□□ -0.55
ATF3-211ENST00000613954 BASP1P80723 227 aaKnown RBP11.63□□□□□ -0.55
ATF3-211ENST00000613954 SLC25A11Q02978 314 aaKnown RBP11.63□□□□□ -0.55
ATF3-211ENST00000613954 GAD2Q05329 585 aa11.63□□□□□ -0.55
ATF3-211ENST00000613954 POU5F1BQ06416 359 aa11.63□□□□□ -0.55
ATF3-211ENST00000613954 FAAP100Q0VG06 881 aa11.63□□□□□ -0.55
ATF3-211ENST00000613954 DPYSL3Q14195 570 aa11.63□□□□□ -0.55
ATF3-211ENST00000613954 PRAMEF19Q5SWL8 479 aa11.63□□□□□ -0.55
ATF3-211ENST00000613954 ADGRG6Q86SQ4 1221 aa11.63□□□□□ -0.55
ATF3-211ENST00000613954 MYLK4Q86YV6 388 aaPredicted RBP11.63□□□□□ -0.55
ATF3-211ENST00000613954 DTNBP1Q96EV8 351 aa11.63□□□□□ -0.55
ATF3-211ENST00000613954 PRR11Q96HE9 360 aaPredicted RBP11.63□□□□□ -0.55
ATF3-211ENST00000613954 FAM84AQ96KN4 292 aa11.63□□□□□ -0.55
ATF3-211ENST00000613954 NLRP4Q96MN2 994 aa11.63□□□□□ -0.55
ATF3-211ENST00000613954 SRPK1Q96SB4 655 aaKnown RBP11.63□□□□□ -0.55
ATF3-211ENST00000613954 C12orf65Q9H3J6 166 aaKnown RBP11.63□□□□□ -0.55
ATF3-211ENST00000613954 PIDD1Q9HB75 910 aa11.63□□□□□ -0.55
ATF3-211ENST00000613954 ARHGEF4Q9NR80 690 aa11.63□□□□□ -0.55
ATF3-211ENST00000613954 MKS1Q9NXB0 559 aa11.63□□□□□ -0.55
ATF3-211ENST00000613954 GJD2Q9UKL4 321 aa11.63□□□□□ -0.55
ATF3-211ENST00000613954 CHMP2BQ9UQN3 213 aa11.63□□□□□ -0.55
ATF3-211ENST00000613954 GNEQ9Y223 722 aaKnown RBP11.63□□□□□ -0.55
ATF3-211ENST00000613954 SLC4A7Q9Y6M7 1214 aa11.63□□□□□ -0.55
ATF3-211ENST00000613954 PTPRJQ12913 1337 aa11.63□□□□□ -0.55
ATF3-211ENST00000613954 FAM237BA0A1B0GVD1 139 aa11.62□□□□□ -0.55
ATF3-211ENST00000613954 A6NJR5 290 aa11.62□□□□□ -0.55
ATF3-211ENST00000613954 TMEM88BA6NKF7 163 aa11.62□□□□□ -0.55
ATF3-211ENST00000613954 ACKR2O00590 384 aa11.62□□□□□ -0.55
ATF3-211ENST00000613954 DYNC1LI2O43237 492 aaPredicted RBP11.62□□□□□ -0.55
ATF3-211ENST00000613954 CA12O43570 354 aa11.62□□□□□ -0.55
ATF3-211ENST00000613954 LYNP07948 512 aa11.62□□□□□ -0.55
ATF3-211ENST00000613954 SNRPAP09012 282 aaKnown RBP11.62□□□□□ -0.55
ATF3-211ENST00000613954 PHKA2P46019 1235 aa11.62□□□□□ -0.55
ATF3-211ENST00000613954 YWHAGP61981 247 aaKnown RBP eCLIP11.62□□□□□ -0.55
ATF3-211ENST00000613954 KBTBD12Q3ZCT8 623 aa11.62□□□□□ -0.55
ATF3-211ENST00000613954 TMCO4Q5TGY1 634 aa11.62□□□□□ -0.55
ATF3-211ENST00000613954 AAGABQ6PD74 315 aa11.62□□□□□ -0.55
ATF3-211ENST00000613954 KYAT3Q6YP21 454 aaKnown RBP11.62□□□□□ -0.55
ATF3-211ENST00000613954 TTC7BQ86TV6 843 aa11.62□□□□□ -0.55
ATF3-211ENST00000613954 PPP2R3CQ969Q6 453 aa11.62□□□□□ -0.55
ATF3-211ENST00000613954 E2F7Q96AV8 911 aa11.62□□□□□ -0.55
ATF3-211ENST00000613954 ACSF2Q96CM8 615 aaPredicted RBP11.62□□□□□ -0.55
ATF3-211ENST00000613954 VCX3BQ9H321 246 aa11.62□□□□□ -0.55
ATF3-211ENST00000613954 FZD8Q9H461 694 aa11.62□□□□□ -0.55
ATF3-211ENST00000613954 VCX3AQ9NNX9 186 aa11.62□□□□□ -0.55
ATF3-211ENST00000613954 DMAP1Q9NPF5 467 aaPredicted RBP11.62□□□□□ -0.55
ATF3-211ENST00000613954 PPARGC1AQ9UBK2 798 aaKnown RBP11.62□□□□□ -0.55
ATF3-211ENST00000613954 TEX264Q9Y6I9 313 aa11.62□□□□□ -0.55
ATF3-211ENST00000613954 KBTBD13C9JR72 458 aa11.62□□□□□ -0.55
ATF3-211ENST00000613954 TRDMT1O14717 391 aaKnown RBP11.62□□□□□ -0.55
ATF3-211ENST00000613954 CHADO15335 359 aa11.62□□□□□ -0.55
ATF3-211ENST00000613954 MAP3K13O43283 966 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms