RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 RRN3Q9NYV6 651 aa14.37□□□□□ -0.11
TMEM254-213ENST00000613758 PCSK1NQ9UHG2 260 aa14.37□□□□□ -0.11
TMEM254-213ENST00000613758 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.37□□□□□ -0.11
TMEM254-213ENST00000613758 PER2O15055 1255 aa14.36□□□□□ -0.11
TMEM254-213ENST00000613758 PSTPIP1O43586 416 aa14.36□□□□□ -0.11
TMEM254-213ENST00000613758 C1RP00736 705 aa14.36□□□□□ -0.11
TMEM254-213ENST00000613758 C8AP07357 584 aa14.36□□□□□ -0.11
TMEM254-213ENST00000613758 PAFAH1B1P43034 410 aa14.36□□□□□ -0.11
TMEM254-213ENST00000613758 CCDC181Q5TID7 509 aa14.36□□□□□ -0.11
TMEM254-213ENST00000613758 LRRC38Q5VT99 294 aa14.36□□□□□ -0.11
TMEM254-213ENST00000613758 DCAF12L1Q5VU92 463 aa14.36□□□□□ -0.11
TMEM254-213ENST00000613758 STRADAQ7RTN6 431 aa14.36□□□□□ -0.11
TMEM254-213ENST00000613758 RASGEF1CQ8N431 466 aa14.36□□□□□ -0.11
TMEM254-213ENST00000613758 PARD6BQ9BYG5 372 aa14.36□□□□□ -0.11
TMEM254-213ENST00000613758 TLR8Q9NR97 1041 aaKnown RBP14.36□□□□□ -0.11
TMEM254-213ENST00000613758 M0QYT0 321 aa14.36□□□□□ -0.11
TMEM254-213ENST00000613758 RFXAPO00287 272 aa14.36□□□□□ -0.11
TMEM254-213ENST00000613758 ENDOD1O94919 500 aa14.36□□□□□ -0.11
TMEM254-213ENST00000613758 LRG1P02750 347 aa14.36□□□□□ -0.11
TMEM254-213ENST00000613758 IL1R2P27930 398 aa14.36□□□□□ -0.11
TMEM254-213ENST00000613758 GJC1P36383 396 aa14.36□□□□□ -0.11
TMEM254-213ENST00000613758 PSEN1P49768 467 aa14.36□□□□□ -0.11
TMEM254-213ENST00000613758 HDAC4P56524 1084 aa14.36□□□□□ -0.11
TMEM254-213ENST00000613758 RWDD2BP57060 319 aa14.36□□□□□ -0.11
TMEM254-213ENST00000613758 ATP13A4Q4VNC1 1196 aa14.36□□□□□ -0.11
TMEM254-213ENST00000613758 SCYL2Q6P3W7 929 aa14.36□□□□□ -0.11
TMEM254-213ENST00000613758 RBM23Q86U06 439 aaKnown RBP14.36□□□□□ -0.11
TMEM254-213ENST00000613758 ITIH5Q86UX2 942 aa14.36□□□□□ -0.11
TMEM254-213ENST00000613758 MMGT1Q8N4V1 131 aa14.36□□□□□ -0.11
TMEM254-213ENST00000613758 SLC22A17Q8WUG5 538 aa14.36□□□□□ -0.11
TMEM254-213ENST00000613758 PSMG2Q969U7 264 aa14.36□□□□□ -0.11
TMEM254-213ENST00000613758 MYRFLQ96LU7 910 aa14.36□□□□□ -0.11
TMEM254-213ENST00000613758 PNKPQ96T60 521 aa14.36□□□□□ -0.11
TMEM254-213ENST00000613758 ZWILCHQ9H900 591 aa14.36□□□□□ -0.11
TMEM254-213ENST00000613758 CALCOCO1Q9P1Z2 691 aa14.36□□□□□ -0.11
TMEM254-213ENST00000613758 USP18Q9UMW8 372 aa14.36□□□□□ -0.11
TMEM254-213ENST00000613758 ASB3Q9Y575 518 aa14.36□□□□□ -0.11
TMEM254-213ENST00000613758 TRUB2O95900 331 aaKnown RBP14.35□□□□□ -0.11
TMEM254-213ENST00000613758 RHOXF2BP0C7M4 288 aa14.35□□□□□ -0.11
TMEM254-213ENST00000613758 ZDHHC11BP0C7U3 371 aa14.35□□□□□ -0.11
TMEM254-213ENST00000613758 SLC25A11Q02978 314 aaKnown RBP14.35□□□□□ -0.11
TMEM254-213ENST00000613758 MLLT1Q03111 559 aaPredicted RBP14.35□□□□□ -0.11
TMEM254-213ENST00000613758 DEUP1Q05D60 604 aa14.35□□□□□ -0.11
TMEM254-213ENST00000613758 NME3Q13232 169 aa14.35□□□□□ -0.11
TMEM254-213ENST00000613758 OTUD1Q5VV17 481 aaPredicted RBP14.35□□□□□ -0.11
TMEM254-213ENST00000613758 TXNRD3NBQ6F5E7 133 aa14.35□□□□□ -0.11
TMEM254-213ENST00000613758 BNIPLQ7Z465 357 aa14.35□□□□□ -0.11
TMEM254-213ENST00000613758 ADGRD2Q7Z7M1 963 aa14.35□□□□□ -0.11
TMEM254-213ENST00000613758 ADAM32Q8TC27 787 aa14.35□□□□□ -0.11
TMEM254-213ENST00000613758 ACTRT1Q8TDG2 376 aa14.35□□□□□ -0.11
TMEM254-213ENST00000613758 RNF139Q8WU17 664 aa14.35□□□□□ -0.11
TMEM254-213ENST00000613758 TRMT2BQ96GJ1 504 aaKnown RBP14.35□□□□□ -0.11
TMEM254-213ENST00000613758 RHOXF2Q9BQY4 288 aa14.35□□□□□ -0.11
TMEM254-213ENST00000613758 PLEKHA4Q9H4M7 779 aa14.35□□□□□ -0.11
TMEM254-213ENST00000613758 CLIC5Q9NZA1 410 aa14.35□□□□□ -0.11
TMEM254-213ENST00000613758 SYNJ2BP-COX16A0A087WUM0 186 aa14.34□□□□□ -0.11
TMEM254-213ENST00000613758 PRPSAP2O60256 369 aa14.34□□□□□ -0.11
TMEM254-213ENST00000613758 KRT7P08729 469 aa14.34□□□□□ -0.11
TMEM254-213ENST00000613758 RARGP13631 454 aa14.34□□□□□ -0.11
TMEM254-213ENST00000613758 EPCAMP16422 314 aa14.34□□□□□ -0.11
TMEM254-213ENST00000613758 RDXP35241 583 aaKnown RBP14.34□□□□□ -0.11
TMEM254-213ENST00000613758 ATXN1P54253 815 aaKnown RBP14.34□□□□□ -0.11
TMEM254-213ENST00000613758 PPM1LQ5SGD2 360 aa14.34□□□□□ -0.11
TMEM254-213ENST00000613758 RTL10Q7L3V2 364 aa14.34□□□□□ -0.11
TMEM254-213ENST00000613758 POLNQ7Z5Q5 900 aa14.34□□□□□ -0.11
TMEM254-213ENST00000613758 PDZD8Q8NEN9 1154 aa14.34□□□□□ -0.11
TMEM254-213ENST00000613758 DQX1Q8TE96 717 aaKnown RBP14.34□□□□□ -0.11
TMEM254-213ENST00000613758 OVCA2Q8WZ82 227 aa14.34□□□□□ -0.11
TMEM254-213ENST00000613758 PGAP3Q96FM1 320 aaPredicted RBP14.34□□□□□ -0.11
TMEM254-213ENST00000613758 ZNF512Q96ME7 567 aaPredicted RBP14.34□□□□□ -0.11
TMEM254-213ENST00000613758 PEBP4Q96S96 227 aa14.34□□□□□ -0.11
TMEM254-213ENST00000613758 CARD9Q9H257 536 aa14.34□□□□□ -0.11
TMEM254-213ENST00000613758 MAN1C1Q9NR34 630 aa14.34□□□□□ -0.11
TMEM254-213ENST00000613758 RBM12Q9NTZ6 932 aaKnown RBP14.34□□□□□ -0.11
TMEM254-213ENST00000613758 COX16Q9P0S2 106 aa14.34□□□□□ -0.11
TMEM254-213ENST00000613758 NUDT5Q9UKK9 219 aa14.34□□□□□ -0.11
TMEM254-213ENST00000613758 RAB21Q9UL25 225 aa14.34□□□□□ -0.11
TMEM254-213ENST00000613758 GREB1Q4ZG55 1949 aa14.34□□□□□ -0.11
TMEM254-213ENST00000613758 CEP104O60308 925 aa14.34□□□□□ -0.11
TMEM254-213ENST00000613758 F9P00740 461 aa14.34□□□□□ -0.11
TMEM254-213ENST00000613758 RALAP11233 206 aa14.34□□□□□ -0.11
TMEM254-213ENST00000613758 ZNF211Q13398 564 aaPredicted RBP14.34□□□□□ -0.11
TMEM254-213ENST00000613758 ZFYVE27Q5T4F4 411 aa14.34□□□□□ -0.11
TMEM254-213ENST00000613758 KATNAL2Q8IYT4 538 aa14.34□□□□□ -0.11
TMEM254-213ENST00000613758 TLE6Q9H808 572 aa14.34□□□□□ -0.11
TMEM254-213ENST00000613758 FAM204AQ9H8W3 233 aa14.34□□□□□ -0.11
TMEM254-213ENST00000613758 PIGVQ9NUD9 493 aa14.34□□□□□ -0.11
TMEM254-213ENST00000613758 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.34□□□□□ -0.11
TMEM254-213ENST00000613758 DDIT4Q9NX09 232 aa14.34□□□□□ -0.11
TMEM254-213ENST00000613758 DDX56Q9NY93 547 aaKnown RBP14.34□□□□□ -0.11
TMEM254-213ENST00000613758 TRPM5Q9NZQ8 1165 aa14.34□□□□□ -0.11
TMEM254-213ENST00000613758 UXTQ9UBK9 157 aaPredicted RBP14.34□□□□□ -0.11
TMEM254-213ENST00000613758 PLXNA3P51805 1871 aa14.34□□□□□ -0.11
TMEM254-213ENST00000613758 ZMYND10O75800 440 aa14.33□□□□□ -0.11
TMEM254-213ENST00000613758 PYGMP11217 842 aa14.33□□□□□ -0.11
TMEM254-213ENST00000613758 CLCN6P51797 869 aa14.33□□□□□ -0.11
TMEM254-213ENST00000613758 SMTNL2Q2TAL5 461 aa14.33□□□□□ -0.11
TMEM254-213ENST00000613758 BOLA3Q53S33 107 aa14.33□□□□□ -0.11
TMEM254-213ENST00000613758 KCNT1Q5JUK3 1230 aa14.33□□□□□ -0.11
TMEM254-213ENST00000613758 TAC4Q86UU9 113 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms