RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 PCDHGA4Q9Y5G9 962 aa22.77■■□□□ 1.24
POLR2J3-220ENST00000613744 COL1A2P08123 1366 aa22.77■■□□□ 1.24
POLR2J3-220ENST00000613744 UQCRBP14927 111 aa22.77■■□□□ 1.23
POLR2J3-220ENST00000613744 ADAM17P78536 824 aa22.77■■□□□ 1.23
POLR2J3-220ENST00000613744 SULT2A1Q06520 285 aa22.77■■□□□ 1.23
POLR2J3-220ENST00000613744 SLC47A2Q86VL8 602 aa22.77■■□□□ 1.23
POLR2J3-220ENST00000613744 CATSPER2Q96P56 530 aa22.77■■□□□ 1.23
POLR2J3-220ENST00000613744 PANX3Q96QZ0 392 aa22.77■■□□□ 1.23
POLR2J3-220ENST00000613744 TRPV6Q9H1D0 765 aa22.77■■□□□ 1.23
POLR2J3-220ENST00000613744 TMEM206Q9H813 350 aa22.77■■□□□ 1.23
POLR2J3-220ENST00000613744 FBXO6Q9NRD1 293 aaPredicted RBP22.77■■□□□ 1.23
POLR2J3-220ENST00000613744 DRG1Q9Y295 367 aaKnown RBP22.77■■□□□ 1.23
POLR2J3-220ENST00000613744 PROSCO94903 275 aa22.76■■□□□ 1.23
POLR2J3-220ENST00000613744 CYP2C9P11712 490 aa22.76■■□□□ 1.23
POLR2J3-220ENST00000613744 TPP2P29144 1249 aaPredicted RBP22.76■■□□□ 1.23
POLR2J3-220ENST00000613744 TMEM62Q0P6H9 643 aa22.76■■□□□ 1.23
POLR2J3-220ENST00000613744 CFAP157Q5JU67 520 aa22.76■■□□□ 1.23
POLR2J3-220ENST00000613744 MZB1Q8WU39 189 aa22.76■■□□□ 1.23
POLR2J3-220ENST00000613744 BSNDQ8WZ55 320 aa22.76■■□□□ 1.23
POLR2J3-220ENST00000613744 KREMEN1Q96MU8 473 aa22.76■■□□□ 1.23
POLR2J3-220ENST00000613744 TAGLN3Q9UI15 199 aa22.76■■□□□ 1.23
POLR2J3-220ENST00000613744 G3BP2Q9UN86 482 aaKnown RBP22.76■■□□□ 1.23
POLR2J3-220ENST00000613744 SPECC1L-ADORA2AF8WAN1 911 aa22.75■■□□□ 1.23
POLR2J3-220ENST00000613744 SLC16A4O15374 487 aa22.75■■□□□ 1.23
POLR2J3-220ENST00000613744 VTNP04004 478 aa22.75■■□□□ 1.23
POLR2J3-220ENST00000613744 MAPTP10636 758 aaKnown RBP22.75■■□□□ 1.23
POLR2J3-220ENST00000613744 ARL4CP56559 192 aa22.75■■□□□ 1.23
POLR2J3-220ENST00000613744 SNRPFP62306 86 aaKnown RBP22.75■■□□□ 1.23
POLR2J3-220ENST00000613744 DMP1Q13316 513 aaPredicted RBP22.75■■□□□ 1.23
POLR2J3-220ENST00000613744 ULK2Q8IYT8 1036 aa22.75■■□□□ 1.23
POLR2J3-220ENST00000613744 FAM172AQ8WUF8 416 aa22.75■■□□□ 1.23
POLR2J3-220ENST00000613744 DDX1Q92499 740 aaKnown RBP22.75■■□□□ 1.23
POLR2J3-220ENST00000613744 RABGEF1Q9UJ41 708 aa22.75■■□□□ 1.23
POLR2J3-220ENST00000613744 IGKV6-21A0A0C4DH24 114 aa22.75■■□□□ 1.23
POLR2J3-220ENST00000613744 ARVCFO00192 962 aa22.75■■□□□ 1.23
POLR2J3-220ENST00000613744 OPHN1O60890 802 aa22.75■■□□□ 1.23
POLR2J3-220ENST00000613744 MXI1P50539 228 aa22.75■■□□□ 1.23
POLR2J3-220ENST00000613744 IRX4P78413 519 aa22.75■■□□□ 1.23
POLR2J3-220ENST00000613744 LLGL1Q15334 1064 aa22.75■■□□□ 1.23
POLR2J3-220ENST00000613744 DBN1Q16643 649 aa22.75■■□□□ 1.23
POLR2J3-220ENST00000613744 RASSF3Q86WH2 238 aa22.75■■□□□ 1.23
POLR2J3-220ENST00000613744 TRIM42Q8IWZ5 723 aa22.75■■□□□ 1.23
POLR2J3-220ENST00000613744 LRRC43Q8N309 656 aa22.75■■□□□ 1.23
POLR2J3-220ENST00000613744 ATP11CQ8NB49 1132 aa22.75■■□□□ 1.23
POLR2J3-220ENST00000613744 DNAJB3Q8WWF6 145 aa22.75■■□□□ 1.23
POLR2J3-220ENST00000613744 PRPF31Q8WWY3 499 aaKnown RBP22.75■■□□□ 1.23
POLR2J3-220ENST00000613744 WNT8BQ93098 351 aa22.75■■□□□ 1.23
POLR2J3-220ENST00000613744 GFM2Q969S9 779 aaKnown RBP22.75■■□□□ 1.23
POLR2J3-220ENST00000613744 EBF3Q9H4W6 596 aa22.75■■□□□ 1.23
POLR2J3-220ENST00000613744 BLOC1S6Q9UL45 172 aa22.75■■□□□ 1.23
POLR2J3-220ENST00000613744 AKT3Q9Y243 479 aa22.75■■□□□ 1.23
POLR2J3-220ENST00000613744 MBLAC1A4D2B0 266 aaPredicted RBP22.74■■□□□ 1.23
POLR2J3-220ENST00000613744 LIASO43766 372 aa22.74■■□□□ 1.23
POLR2J3-220ENST00000613744 B4GALT4O60513 344 aa22.74■■□□□ 1.23
POLR2J3-220ENST00000613744 PFDN1O60925 122 aa22.74■■□□□ 1.23
POLR2J3-220ENST00000613744 HOXC8P31273 242 aa22.74■■□□□ 1.23
POLR2J3-220ENST00000613744 DLG4P78352 724 aa22.74■■□□□ 1.23
POLR2J3-220ENST00000613744 PCGF5Q86SE9 256 aa22.74■■□□□ 1.23
POLR2J3-220ENST00000613744 RHPN2Q8IUC4 686 aa22.74■■□□□ 1.23
POLR2J3-220ENST00000613744 ALLCQ8N6M5 410 aa22.74■■□□□ 1.23
POLR2J3-220ENST00000613744 MTBPQ96DY7 904 aa22.74■■□□□ 1.23
POLR2J3-220ENST00000613744 NOD1Q9Y239 953 aa22.74■■□□□ 1.23
POLR2J3-220ENST00000613744 MYH11P35749 1972 aa22.74■■□□□ 1.23
POLR2J3-220ENST00000613744 MYL2P10916 166 aa22.73■■□□□ 1.23
POLR2J3-220ENST00000613744 NPTX2P47972 431 aa22.73■■□□□ 1.23
POLR2J3-220ENST00000613744 HPCAP84074 193 aa22.73■■□□□ 1.23
POLR2J3-220ENST00000613744 C1orf220Q5T0J3 134 aa22.73■■□□□ 1.23
POLR2J3-220ENST00000613744 RNASEH2BQ5TBB1 312 aaKnown RBP22.73■■□□□ 1.23
POLR2J3-220ENST00000613744 SLC39A5Q6ZMH5 540 aa22.73■■□□□ 1.23
POLR2J3-220ENST00000613744 DHDDSQ86SQ9 333 aa22.73■■□□□ 1.23
POLR2J3-220ENST00000613744 ZBED8Q8IZ13 594 aa22.73■■□□□ 1.23
POLR2J3-220ENST00000613744 KIAA0319LQ8IZA0 1049 aa22.73■■□□□ 1.23
POLR2J3-220ENST00000613744 MCOLN2Q8IZK6 566 aa22.73■■□□□ 1.23
POLR2J3-220ENST00000613744 RBM15BQ8NDT2 890 aaKnown RBP22.73■■□□□ 1.23
POLR2J3-220ENST00000613744 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.73■■□□□ 1.23
POLR2J3-220ENST00000613744 KAT5Q92993 513 aa22.73■■□□□ 1.23
POLR2J3-220ENST00000613744 BTBD9Q96Q07 612 aa22.73■■□□□ 1.23
POLR2J3-220ENST00000613744 C11orf49Q9H6J7 331 aa22.73■■□□□ 1.23
POLR2J3-220ENST00000613744 ACSS3Q9H6R3 686 aa22.73■■□□□ 1.23
POLR2J3-220ENST00000613744 S100A14Q9HCY8 104 aa22.73■■□□□ 1.23
POLR2J3-220ENST00000613744 TIMMDC1Q9NPL8 285 aa22.73■■□□□ 1.23
POLR2J3-220ENST00000613744 ETNK2Q9NVF9 386 aa22.73■■□□□ 1.23
POLR2J3-220ENST00000613744 HSFX1Q9UBD0 423 aa22.73■■□□□ 1.23
POLR2J3-220ENST00000613744 WDR91A4D1P6 747 aa22.73■■□□□ 1.23
POLR2J3-220ENST00000613744 PQBP1O60828 265 aaKnown RBP22.73■■□□□ 1.23
POLR2J3-220ENST00000613744 COL6A1P12109 1028 aa22.73■■□□□ 1.23
POLR2J3-220ENST00000613744 GCLMP48507 274 aa22.73■■□□□ 1.23
POLR2J3-220ENST00000613744 SCNN1BP51168 640 aa22.73■■□□□ 1.23
POLR2J3-220ENST00000613744 PDIA2Q13087 525 aaKnown RBP22.73■■□□□ 1.23
POLR2J3-220ENST00000613744 B3GNT6Q6ZMB0 384 aa22.73■■□□□ 1.23
POLR2J3-220ENST00000613744 SLC43A3Q8NBI5 491 aa22.73■■□□□ 1.23
POLR2J3-220ENST00000613744 PRR11Q96HE9 360 aaPredicted RBP22.73■■□□□ 1.23
POLR2J3-220ENST00000613744 ABHD8Q96I13 439 aa22.73■■□□□ 1.23
POLR2J3-220ENST00000613744 MPP4Q96JB8 637 aa22.73■■□□□ 1.23
POLR2J3-220ENST00000613744 NMUR2Q9GZQ4 415 aa22.73■■□□□ 1.23
POLR2J3-220ENST00000613744 KMT5AQ9NQR1 393 aa22.73■■□□□ 1.23
POLR2J3-220ENST00000613744 SLC7A8Q9UHI5 535 aa22.73■■□□□ 1.23
POLR2J3-220ENST00000613744 STRIP2Q9ULQ0 834 aa22.73■■□□□ 1.23
POLR2J3-220ENST00000613744 SORCS3Q9UPU3 1222 aa22.73■■□□□ 1.23
POLR2J3-220ENST00000613744 GINS2Q9Y248 185 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms