RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 C15orf59Q2T9L4 293 aaPredicted RBP17.13■□□□□ 0.33
CNOT3-208ENST00000613073 LCLAT1Q6UWP7 414 aa17.13■□□□□ 0.33
CNOT3-208ENST00000613073 LRRC74BQ6ZQY2 392 aa17.13■□□□□ 0.33
CNOT3-208ENST00000613073 SPATA31D4Q6ZUB0 917 aa17.13■□□□□ 0.33
CNOT3-208ENST00000613073 MTDHQ86UE4 582 aaKnown RBP17.13■□□□□ 0.33
CNOT3-208ENST00000613073 KCTD6Q8NC69 237 aa17.13■□□□□ 0.33
CNOT3-208ENST00000613073 AP5M1Q9H0R1 490 aa17.13■□□□□ 0.33
CNOT3-208ENST00000613073 DPEP3Q9H4B8 488 aa17.13■□□□□ 0.33
CNOT3-208ENST00000613073 PLEKHA5Q9HAU0 1116 aa17.13■□□□□ 0.33
CNOT3-208ENST00000613073 PREBQ9HCU5 417 aa17.13■□□□□ 0.33
CNOT3-208ENST00000613073 UBN1Q9NPG3 1134 aa17.13■□□□□ 0.33
CNOT3-208ENST00000613073 ZFP69BQ9UJL9 534 aa17.13■□□□□ 0.33
CNOT3-208ENST00000613073 NUMBLQ9Y6R0 609 aa17.13■□□□□ 0.33
CNOT3-208ENST00000613073 CST8O60676 142 aa17.12■□□□□ 0.33
CNOT3-208ENST00000613073 GABRB2P47870 512 aa17.12■□□□□ 0.33
CNOT3-208ENST00000613073 DYNC1I2Q13409 638 aaKnown RBP17.12■□□□□ 0.33
CNOT3-208ENST00000613073 CYP4F22Q6NT55 531 aa17.12■□□□□ 0.33
CNOT3-208ENST00000613073 TRNP1Q6NT89 227 aa17.12■□□□□ 0.33
CNOT3-208ENST00000613073 PMF1Q6P1K2 205 aa17.12■□□□□ 0.33
CNOT3-208ENST00000613073 CAPN12Q6ZSI9 719 aa17.12■□□□□ 0.33
CNOT3-208ENST00000613073 APLFQ8IW19 511 aaPredicted RBP17.12■□□□□ 0.33
CNOT3-208ENST00000613073 KBTBD2Q8IY47 623 aa17.12■□□□□ 0.33
CNOT3-208ENST00000613073 C4orf33Q8N1A6 199 aa17.12■□□□□ 0.33
CNOT3-208ENST00000613073 TAB3Q8N5C8 712 aaPredicted RBP17.12■□□□□ 0.33
CNOT3-208ENST00000613073 BEST2Q8NFU1 509 aa17.12■□□□□ 0.33
CNOT3-208ENST00000613073 TMEM165Q9HC07 324 aa17.12■□□□□ 0.33
CNOT3-208ENST00000613073 HTTP42858 3142 aa17.12■□□□□ 0.33
CNOT3-208ENST00000613073 SGK1O00141 431 aa17.12■□□□□ 0.33
CNOT3-208ENST00000613073 KRT7P08729 469 aa17.12■□□□□ 0.33
CNOT3-208ENST00000613073 KDELR1P24390 212 aa17.12■□□□□ 0.33
CNOT3-208ENST00000613073 CPT1AP50416 773 aa17.12■□□□□ 0.33
CNOT3-208ENST00000613073 RASSF2P50749 326 aa17.12■□□□□ 0.33
CNOT3-208ENST00000613073 GPS1Q13098 491 aa17.12■□□□□ 0.33
CNOT3-208ENST00000613073 ZBTB6Q15916 424 aa17.12■□□□□ 0.33
CNOT3-208ENST00000613073 HP1BP3Q5SSJ5 553 aaPredicted RBP17.12■□□□□ 0.33
CNOT3-208ENST00000613073 FAM182AQ5T1J6 154 aa17.12■□□□□ 0.33
CNOT3-208ENST00000613073 POLNQ7Z5Q5 900 aa17.12■□□□□ 0.33
CNOT3-208ENST00000613073 TTC30AQ86WT1 665 aa17.12■□□□□ 0.33
CNOT3-208ENST00000613073 FNIP1Q8TF40 1166 aa17.12■□□□□ 0.33
CNOT3-208ENST00000613073 GRAMD1AQ96CP6 724 aa17.12■□□□□ 0.33
CNOT3-208ENST00000613073 CALN1Q9BXU9 219 aa17.12■□□□□ 0.33
CNOT3-208ENST00000613073 CADM1Q9BY67 442 aaKnown RBP17.12■□□□□ 0.33
CNOT3-208ENST00000613073 NPHS2Q9NP85 383 aa17.12■□□□□ 0.33
CNOT3-208ENST00000613073 USP18Q9UMW8 372 aa17.12■□□□□ 0.33
CNOT3-208ENST00000613073 WASF2Q9Y6W5 498 aa17.12■□□□□ 0.33
CNOT3-208ENST00000613073 STAU1O95793 577 aaKnown RBP17.11■□□□□ 0.33
CNOT3-208ENST00000613073 TTC4O95801 387 aa17.11■□□□□ 0.33
CNOT3-208ENST00000613073 PDGFRAP16234 1089 aa17.11■□□□□ 0.33
CNOT3-208ENST00000613073 ADAM17P78536 824 aa17.11■□□□□ 0.33
CNOT3-208ENST00000613073 CNPY1Q3B7I2 92 aa17.11■□□□□ 0.33
CNOT3-208ENST00000613073 CMPK2Q5EBM0 449 aa17.11■□□□□ 0.33
CNOT3-208ENST00000613073 C9orf57Q5W0N0 161 aa17.11■□□□□ 0.33
CNOT3-208ENST00000613073 SCUBE3Q8IX30 993 aa17.11■□□□□ 0.33
CNOT3-208ENST00000613073 ZNF513Q8N8E2 541 aaPredicted RBP17.11■□□□□ 0.33
CNOT3-208ENST00000613073 RXFP2Q8WXD0 754 aa17.11■□□□□ 0.33
CNOT3-208ENST00000613073 WDR91A4D1P6 747 aa17.11■□□□□ 0.33
CNOT3-208ENST00000613073 CDC42EP1Q00587 391 aa17.11■□□□□ 0.33
CNOT3-208ENST00000613073 OTUD4Q01804 1114 aaKnown RBP17.11■□□□□ 0.33
CNOT3-208ENST00000613073 SOWAHAQ2M3V2 549 aa17.11■□□□□ 0.33
CNOT3-208ENST00000613073 ZNF618Q5T7W0 954 aa17.11■□□□□ 0.33
CNOT3-208ENST00000613073 ALLCQ8N6M5 410 aa17.11■□□□□ 0.33
CNOT3-208ENST00000613073 ACTL9Q8TC94 416 aa17.11■□□□□ 0.33
CNOT3-208ENST00000613073 CFAP57Q96MR6 1250 aa17.11■□□□□ 0.33
CNOT3-208ENST00000613073 PEBP4Q96S96 227 aa17.11■□□□□ 0.33
CNOT3-208ENST00000613073 B3GNT5Q9BYG0 378 aa17.11■□□□□ 0.33
CNOT3-208ENST00000613073 MIS12Q9H081 205 aa17.11■□□□□ 0.33
CNOT3-208ENST00000613073 SMIM28A0A1B0GU29 152 aa17.11■□□□□ 0.33
CNOT3-208ENST00000613073 MYADML2A6NDP7 307 aa17.11■□□□□ 0.33
CNOT3-208ENST00000613073 FAM47DPA6NHR8 397 aa17.11■□□□□ 0.33
CNOT3-208ENST00000613073 A8MXQ7 604 aa17.11■□□□□ 0.33
CNOT3-208ENST00000613073 TNPO2O14787 897 aaKnown RBP17.11■□□□□ 0.33
CNOT3-208ENST00000613073 DCTN3O75935 186 aa17.11■□□□□ 0.33
CNOT3-208ENST00000613073 GSTA2P09210 222 aa17.11■□□□□ 0.33
CNOT3-208ENST00000613073 PTPN4P29074 926 aa17.11■□□□□ 0.33
CNOT3-208ENST00000613073 CCNFP41002 786 aa17.11■□□□□ 0.33
CNOT3-208ENST00000613073 VCPP55072 806 aaKnown RBP17.11■□□□□ 0.33
CNOT3-208ENST00000613073 LMNB2Q03252 620 aa17.11■□□□□ 0.33
CNOT3-208ENST00000613073 OVGP1Q12889 678 aa17.11■□□□□ 0.33
CNOT3-208ENST00000613073 C17orf99Q6UX52 265 aa17.11■□□□□ 0.33
CNOT3-208ENST00000613073 ALKAL1Q6UXT8 129 aa17.11■□□□□ 0.33
CNOT3-208ENST00000613073 PPP1R21Q6ZMI0 780 aa17.11■□□□□ 0.33
CNOT3-208ENST00000613073 RHBDL2Q9NX52 303 aa17.11■□□□□ 0.33
CNOT3-208ENST00000613073 GALNT8Q9NY28 637 aa17.11■□□□□ 0.33
CNOT3-208ENST00000613073 NINJ2Q9NZG7 142 aa17.11■□□□□ 0.33
CNOT3-208ENST00000613073 GRID1Q9ULK0 1009 aa17.11■□□□□ 0.33
CNOT3-208ENST00000613073 C17orf102A2RUQ5 167 aa17.1■□□□□ 0.33
CNOT3-208ENST00000613073 CFAP69A5D8W1 941 aa17.1■□□□□ 0.33
CNOT3-208ENST00000613073 MAGEA13PA6NCF6 341 aa17.1■□□□□ 0.33
CNOT3-208ENST00000613073 C6orf222P0C671 652 aaPredicted RBP17.1■□□□□ 0.33
CNOT3-208ENST00000613073 MMRN1Q13201 1228 aa17.1■□□□□ 0.33
CNOT3-208ENST00000613073 OASLQ15646 514 aaKnown RBP17.1■□□□□ 0.33
CNOT3-208ENST00000613073 FSCN1Q16658 493 aaKnown RBP17.1■□□□□ 0.33
CNOT3-208ENST00000613073 RFX6Q8HWS3 928 aa17.1■□□□□ 0.33
CNOT3-208ENST00000613073 WDR60Q8WVS4 1066 aa17.1■□□□□ 0.33
CNOT3-208ENST00000613073 DMAP1Q9NPF5 467 aaPredicted RBP17.1■□□□□ 0.33
CNOT3-208ENST00000613073 ASNSD1Q9NWL6 643 aa17.1■□□□□ 0.33
CNOT3-208ENST00000613073 CNTN3Q9P232 1028 aa17.1■□□□□ 0.33
CNOT3-208ENST00000613073 MANSC4A6NHS7 340 aaPredicted RBP17.1■□□□□ 0.33
CNOT3-208ENST00000613073 HAS3O00219 553 aa17.1■□□□□ 0.33
CNOT3-208ENST00000613073 SPTLC1O15269 473 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms