RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 MEIS3P2A8K0S8 358 aa16.59■□□□□ 0.25
RTN1-209ENST00000611068 TRAFD1O14545 582 aaPredicted RBP16.59■□□□□ 0.25
RTN1-209ENST00000611068 NFKBIAP25963 317 aa16.59■□□□□ 0.25
RTN1-209ENST00000611068 MARCKSL1P49006 195 aa16.59■□□□□ 0.25
RTN1-209ENST00000611068 ARFIP2P53365 341 aa16.59■□□□□ 0.25
RTN1-209ENST00000611068 CLEC16AQ2KHT3 1053 aa16.59■□□□□ 0.25
RTN1-209ENST00000611068 ENOSF1Q7L5Y1 443 aa16.59■□□□□ 0.25
RTN1-209ENST00000611068 CEP70Q8NHQ1 597 aa16.59■□□□□ 0.25
RTN1-209ENST00000611068 TMEM109Q9BVC6 243 aa16.59■□□□□ 0.25
RTN1-209ENST00000611068 DPP3Q9NY33 737 aa16.59■□□□□ 0.25
RTN1-209ENST00000611068 ZNF236Q9UL36 1845 aa16.59■□□□□ 0.25
RTN1-209ENST00000611068 SEPT4O43236 478 aa16.58■□□□□ 0.25
RTN1-209ENST00000611068 ALDH1A1P00352 501 aa16.58■□□□□ 0.25
RTN1-209ENST00000611068 RRM1P23921 792 aa16.58■□□□□ 0.25
RTN1-209ENST00000611068 ANXA13P27216 316 aa16.58■□□□□ 0.25
RTN1-209ENST00000611068 CCR3P51677 355 aa16.58■□□□□ 0.25
RTN1-209ENST00000611068 SMUG1Q53HV7 270 aa16.58■□□□□ 0.25
RTN1-209ENST00000611068 MFSD5Q6N075 450 aa16.58■□□□□ 0.25
RTN1-209ENST00000611068 NT5DC3Q86UY8 548 aa16.58■□□□□ 0.25
RTN1-209ENST00000611068 RASGEF1CQ8N431 466 aa16.58■□□□□ 0.25
RTN1-209ENST00000611068 ZNF606Q8WXB4 792 aa16.58■□□□□ 0.25
RTN1-209ENST00000611068 TRIP11Q15643 1979 aa16.58■□□□□ 0.24
RTN1-209ENST00000611068 VILLO15195 856 aa16.58■□□□□ 0.24
RTN1-209ENST00000611068 ALDH2P05091 517 aa16.58■□□□□ 0.24
RTN1-209ENST00000611068 PORP16435 677 aaPredicted RBP16.58■□□□□ 0.24
RTN1-209ENST00000611068 HALP42357 657 aa16.58■□□□□ 0.24
RTN1-209ENST00000611068 CLCN2P51788 898 aa16.58■□□□□ 0.24
RTN1-209ENST00000611068 GEMIN4P57678 1058 aaKnown RBP16.58■□□□□ 0.24
RTN1-209ENST00000611068 ITGA7Q13683 1181 aa16.58■□□□□ 0.24
RTN1-209ENST00000611068 ZNF667Q5HYK9 610 aa16.58■□□□□ 0.24
RTN1-209ENST00000611068 ACAD10Q6JQN1 1059 aa16.58■□□□□ 0.24
RTN1-209ENST00000611068 SLC27A1Q6PCB7 646 aa16.58■□□□□ 0.24
RTN1-209ENST00000611068 DIS3LQ8TF46 1054 aaKnown RBP16.58■□□□□ 0.24
RTN1-209ENST00000611068 HPDLQ96IR7 371 aa16.58■□□□□ 0.24
RTN1-209ENST00000611068 MAGEB18Q96M61 343 aa16.58■□□□□ 0.24
RTN1-209ENST00000611068 TWNKQ96RR1 684 aa16.58■□□□□ 0.24
RTN1-209ENST00000611068 SPC25Q9HBM1 224 aa16.58■□□□□ 0.24
RTN1-209ENST00000611068 SLCO1B3Q9NPD5 702 aa16.58■□□□□ 0.24
RTN1-209ENST00000611068 CREBZFQ9NS37 354 aa16.58■□□□□ 0.24
RTN1-209ENST00000611068 PTTG2Q9NZH5 202 aa16.58■□□□□ 0.24
RTN1-209ENST00000611068 GRHL1Q9NZI5 618 aa16.58■□□□□ 0.24
RTN1-209ENST00000611068 PIK3R2O00459 728 aa16.57■□□□□ 0.24
RTN1-209ENST00000611068 RECQL4O94761 1208 aa16.57■□□□□ 0.24
RTN1-209ENST00000611068 IL18RAPO95256 599 aa16.57■□□□□ 0.24
RTN1-209ENST00000611068 BRAFP15056 766 aa16.57■□□□□ 0.24
RTN1-209ENST00000611068 TBXAS1P24557 533 aaPredicted RBP16.57■□□□□ 0.24
RTN1-209ENST00000611068 IGFBP6P24592 240 aaPredicted RBP16.57■□□□□ 0.24
RTN1-209ENST00000611068 VEGFBP49765 207 aa16.57■□□□□ 0.24
RTN1-209ENST00000611068 GJA9P57773 515 aa16.57■□□□□ 0.24
RTN1-209ENST00000611068 LMNB2Q03252 620 aa16.57■□□□□ 0.24
RTN1-209ENST00000611068 SURF1Q15526 300 aa16.57■□□□□ 0.24
RTN1-209ENST00000611068 TWF2Q6IBS0 349 aaKnown RBP16.57■□□□□ 0.24
RTN1-209ENST00000611068 SLC2A7Q6PXP3 512 aa16.57■□□□□ 0.24
RTN1-209ENST00000611068 CLIP3Q96DZ5 547 aa16.57■□□□□ 0.24
RTN1-209ENST00000611068 SMC6Q96SB8 1091 aa16.57■□□□□ 0.24
RTN1-209ENST00000611068 MTG1Q9BT17 334 aaPredicted RBP16.57■□□□□ 0.24
RTN1-209ENST00000611068 KATNAL1Q9BW62 490 aa16.57■□□□□ 0.24
RTN1-209ENST00000611068 IL1RAPL1Q9NZN1 696 aa16.57■□□□□ 0.24
RTN1-209ENST00000611068 TMED5Q9Y3A6 229 aa16.57■□□□□ 0.24
RTN1-209ENST00000611068 ALG6Q9Y672 507 aa16.57■□□□□ 0.24
RTN1-209ENST00000611068 BTNL10A8MVZ5 291 aa16.57■□□□□ 0.24
RTN1-209ENST00000611068 HCRTO43612 131 aa16.57■□□□□ 0.24
RTN1-209ENST00000611068 PGM3O95394 542 aa16.57■□□□□ 0.24
RTN1-209ENST00000611068 DNAJC3Q13217 504 aa16.57■□□□□ 0.24
RTN1-209ENST00000611068 CYLC2Q14093 348 aaPredicted RBP16.57■□□□□ 0.24
RTN1-209ENST00000611068 NOTUMQ6P988 496 aa16.57■□□□□ 0.24
RTN1-209ENST00000611068 RIN3Q8TB24 985 aa16.57■□□□□ 0.24
RTN1-209ENST00000611068 ZNF564Q8TBZ8 553 aaPredicted RBP16.57■□□□□ 0.24
RTN1-209ENST00000611068 RAET1EQ8TD07 263 aa16.57■□□□□ 0.24
RTN1-209ENST00000611068 KRT35Q92764 455 aa16.57■□□□□ 0.24
RTN1-209ENST00000611068 ECSITQ9BQ95 431 aa16.57■□□□□ 0.24
RTN1-209ENST00000611068 LPIN3Q9BQK8 851 aa16.57■□□□□ 0.24
RTN1-209ENST00000611068 EBF3Q9H4W6 596 aa16.57■□□□□ 0.24
RTN1-209ENST00000611068 TRMT13Q9NUP7 481 aaKnown RBP16.57■□□□□ 0.24
RTN1-209ENST00000611068 ZNF212Q9UDV6 495 aa16.57■□□□□ 0.24
RTN1-209ENST00000611068 AMFRQ9UKV5 643 aa16.57■□□□□ 0.24
RTN1-209ENST00000611068 CDY2AQ9Y6F7 541 aa16.57■□□□□ 0.24
RTN1-209ENST00000611068 GSTT2P0CG29 244 aa16.56■□□□□ 0.24
RTN1-209ENST00000611068 GSTT2BP0CG30 244 aa16.56■□□□□ 0.24
RTN1-209ENST00000611068 UNGP13051 313 aaPredicted RBP16.56■□□□□ 0.24
RTN1-209ENST00000611068 AMPD1P23109 780 aa16.56■□□□□ 0.24
RTN1-209ENST00000611068 HOXD11P31277 338 aaPredicted RBP16.56■□□□□ 0.24
RTN1-209ENST00000611068 NSFP46459 744 aaKnown RBP16.56■□□□□ 0.24
RTN1-209ENST00000611068 AFF1P51825 1210 aaKnown RBP16.56■□□□□ 0.24
RTN1-209ENST00000611068 AP3M2P53677 418 aa16.56■□□□□ 0.24
RTN1-209ENST00000611068 C14orf80Q86SX3 495 aa16.56■□□□□ 0.24
RTN1-209ENST00000611068 IRGQQ8WZA9 623 aa16.56■□□□□ 0.24
RTN1-209ENST00000611068 HHIPL1Q96JK4 782 aa16.56■□□□□ 0.24
RTN1-209ENST00000611068 SYNCQ9H7C4 482 aa16.56■□□□□ 0.24
RTN1-209ENST00000611068 USP29Q9HBJ7 922 aa16.56■□□□□ 0.24
RTN1-209ENST00000611068 RASAL2Q9UJF2 1139 aa16.56■□□□□ 0.24
RTN1-209ENST00000611068 Q9Y3F1 56 aa16.56■□□□□ 0.24
RTN1-209ENST00000611068 NCANO14594 1321 aa16.56■□□□□ 0.24
RTN1-209ENST00000611068 COMTP21964 271 aa16.56■□□□□ 0.24
RTN1-209ENST00000611068 THPOP40225 353 aa16.56■□□□□ 0.24
RTN1-209ENST00000611068 DSG1Q02413 1049 aa16.56■□□□□ 0.24
RTN1-209ENST00000611068 ENPEPQ07075 957 aa16.56■□□□□ 0.24
RTN1-209ENST00000611068 CYP4A22Q5TCH4 519 aa16.56■□□□□ 0.24
RTN1-209ENST00000611068 JAMLQ86YT9 394 aa16.56■□□□□ 0.24
RTN1-209ENST00000611068 RNF169Q8NCN4 708 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms