RNA–Protein interactions for RNA: ENST00000610535.4

TNIP1-220, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-220ENST00000610535 CDO1Q16878 200 aa17.56■□□□□ 0.4
TNIP1-220ENST00000610535 KYAT3Q6YP21 454 aaKnown RBP17.56■□□□□ 0.4
TNIP1-220ENST00000610535 MPP5Q8N3R9 675 aa17.56■□□□□ 0.4
TNIP1-220ENST00000610535 XYLT2Q9H1B5 865 aa17.56■□□□□ 0.4
TNIP1-220ENST00000610535 C1orf21Q9H246 121 aa17.56■□□□□ 0.4
TNIP1-220ENST00000610535 XAB2Q9HCS7 855 aaKnown RBP17.56■□□□□ 0.4
TNIP1-220ENST00000610535 PGAP2Q9UHJ9 254 aa17.56■□□□□ 0.4
TNIP1-220ENST00000610535 APOEP02649 317 aa17.55■□□□□ 0.4
TNIP1-220ENST00000610535 C15orf59Q2T9L4 293 aaPredicted RBP17.55■□□□□ 0.4
TNIP1-220ENST00000610535 EFHC1Q5JVL4 640 aa17.55■□□□□ 0.4
TNIP1-220ENST00000610535 DPY19L2Q6NUT2 758 aa17.55■□□□□ 0.4
TNIP1-220ENST00000610535 DHDDSQ86SQ9 333 aa17.55■□□□□ 0.4
TNIP1-220ENST00000610535 PDSS2Q86YH6 399 aa17.55■□□□□ 0.4
TNIP1-220ENST00000610535 B4GALNT2Q8NHY0 566 aa17.55■□□□□ 0.4
TNIP1-220ENST00000610535 PPP1R14CQ8TAE6 165 aa17.55■□□□□ 0.4
TNIP1-220ENST00000610535 NSUN6Q8TEA1 469 aaKnown RBP17.55■□□□□ 0.4
TNIP1-220ENST00000610535 GMLQ99445 158 aa17.55■□□□□ 0.4
TNIP1-220ENST00000610535 UBE2OQ9C0C9 1292 aaKnown RBP17.55■□□□□ 0.4
TNIP1-220ENST00000610535 GPATCH2LQ9NWQ4 482 aa17.55■□□□□ 0.4
TNIP1-220ENST00000610535 FKBP6O75344 327 aa17.55■□□□□ 0.4
TNIP1-220ENST00000610535 KRT38O76015 456 aa17.55■□□□□ 0.4
TNIP1-220ENST00000610535 OATP04181 439 aa17.55■□□□□ 0.4
TNIP1-220ENST00000610535 GRIA2P42262 883 aa17.55■□□□□ 0.4
TNIP1-220ENST00000610535 CXCL9Q07325 125 aa17.55■□□□□ 0.4
TNIP1-220ENST00000610535 MSLNQ13421 630 aaPredicted RBP17.55■□□□□ 0.4
TNIP1-220ENST00000610535 TUBB3Q13509 450 aa17.55■□□□□ 0.4
TNIP1-220ENST00000610535 ISLR2Q6UXK2 745 aa17.55■□□□□ 0.4
TNIP1-220ENST00000610535 DPH6Q7L8W6 267 aa17.55■□□□□ 0.4
TNIP1-220ENST00000610535 SESTD1Q86VW0 696 aa17.55■□□□□ 0.4
TNIP1-220ENST00000610535 UNC5BQ8IZJ1 945 aa17.55■□□□□ 0.4
TNIP1-220ENST00000610535 EZH1Q92800 747 aaPredicted RBP17.55■□□□□ 0.4
TNIP1-220ENST00000610535 CYP4F11Q9HBI6 524 aa17.55■□□□□ 0.4
TNIP1-220ENST00000610535 ZNF302Q9NR11 478 aa17.55■□□□□ 0.4
TNIP1-220ENST00000610535 DNAJC16Q9Y2G8 782 aa17.55■□□□□ 0.4
TNIP1-220ENST00000610535 GRAP2O75791 330 aa17.54■□□□□ 0.4
TNIP1-220ENST00000610535 KRT19P08727 400 aa17.54■□□□□ 0.4
TNIP1-220ENST00000610535 AOC1P19801 751 aa17.54■□□□□ 0.4
TNIP1-220ENST00000610535 AQP4P55087 323 aa17.54■□□□□ 0.4
TNIP1-220ENST00000610535 WASHC5Q12768 1159 aa17.54■□□□□ 0.4
TNIP1-220ENST00000610535 PEX6Q13608 980 aa17.54■□□□□ 0.4
TNIP1-220ENST00000610535 FASTKD1Q53R41 847 aaKnown RBP17.54■□□□□ 0.4
TNIP1-220ENST00000610535 TRNP1Q6NT89 227 aa17.54■□□□□ 0.4
TNIP1-220ENST00000610535 XRRA1Q6P2D8 792 aa17.54■□□□□ 0.4
TNIP1-220ENST00000610535 CYP4V2Q6ZWL3 525 aaPredicted RBP17.54■□□□□ 0.4
TNIP1-220ENST00000610535 RSPH3Q86UC2 560 aa17.54■□□□□ 0.4
TNIP1-220ENST00000610535 CDR2LQ86X02 465 aaPredicted RBP17.54■□□□□ 0.4
TNIP1-220ENST00000610535 TWNKQ96RR1 684 aa17.54■□□□□ 0.4
TNIP1-220ENST00000610535 NDNQ99608 321 aa17.54■□□□□ 0.4
TNIP1-220ENST00000610535 LHX5Q9H2C1 402 aa17.54■□□□□ 0.4
TNIP1-220ENST00000610535 THAP1Q9NVV9 213 aa17.54■□□□□ 0.4
TNIP1-220ENST00000610535 PAK5Q9P286 719 aa17.54■□□□□ 0.4
TNIP1-220ENST00000610535 HMGXB4Q9UGU5 601 aa17.54■□□□□ 0.4
TNIP1-220ENST00000610535 WNT10BO00744 389 aa17.54■□□□□ 0.4
TNIP1-220ENST00000610535 TRDMT1O14717 391 aaKnown RBP17.54■□□□□ 0.4
TNIP1-220ENST00000610535 GSRP00390 522 aa17.54■□□□□ 0.4
TNIP1-220ENST00000610535 PROCP04070 461 aa17.54■□□□□ 0.4
TNIP1-220ENST00000610535 PEX2P28328 305 aa17.54■□□□□ 0.4
TNIP1-220ENST00000610535 CRHR1P34998 444 aa17.54■□□□□ 0.4
TNIP1-220ENST00000610535 GRIA1P42261 906 aa17.54■□□□□ 0.4
TNIP1-220ENST00000610535 RPL10AP62906 217 aaKnown RBP17.54■□□□□ 0.4
TNIP1-220ENST00000610535 DLG1Q12959 904 aa17.54■□□□□ 0.4
TNIP1-220ENST00000610535 DYNC1I2Q13409 638 aaKnown RBP17.54■□□□□ 0.4
TNIP1-220ENST00000610535 CCNIQ14094 377 aa17.54■□□□□ 0.4
TNIP1-220ENST00000610535 HNRNPDQ14103 355 aaKnown RBP17.54■□□□□ 0.4
TNIP1-220ENST00000610535 WDR78Q5VTH9 848 aa17.54■□□□□ 0.4
TNIP1-220ENST00000610535 SNRNP48Q6IEG0 339 aaKnown RBP17.54■□□□□ 0.4
TNIP1-220ENST00000610535 ATG14Q6ZNE5 492 aa17.54■□□□□ 0.4
TNIP1-220ENST00000610535 MARK2Q7KZI7 788 aaKnown RBP17.54■□□□□ 0.4
TNIP1-220ENST00000610535 ARHGAP18Q8N392 663 aa17.54■□□□□ 0.4
TNIP1-220ENST00000610535 CCDC33Q8N5R6 958 aa17.54■□□□□ 0.4
TNIP1-220ENST00000610535 PLD5Q8N7P1 536 aa17.54■□□□□ 0.4
TNIP1-220ENST00000610535 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.54■□□□□ 0.4
TNIP1-220ENST00000610535 CENPKQ9BS16 269 aa17.54■□□□□ 0.4
TNIP1-220ENST00000610535 IRAK4Q9NWZ3 460 aa17.54■□□□□ 0.4
TNIP1-220ENST00000610535 SLC17A6Q9P2U8 582 aa17.54■□□□□ 0.4
TNIP1-220ENST00000610535 A6NJR5 290 aa17.53■□□□□ 0.4
TNIP1-220ENST00000610535 ADCY3O60266 1144 aa17.53■□□□□ 0.4
TNIP1-220ENST00000610535 HMGCRP04035 888 aa17.53■□□□□ 0.4
TNIP1-220ENST00000610535 SPATA31D3P0C874 917 aa17.53■□□□□ 0.4
TNIP1-220ENST00000610535 KCNA4P22459 653 aa17.53■□□□□ 0.4
TNIP1-220ENST00000610535 MED21Q13503 144 aa17.53■□□□□ 0.4
TNIP1-220ENST00000610535 FAM102AQ5T9C2 384 aaPredicted RBP17.53■□□□□ 0.4
TNIP1-220ENST00000610535 SPATA31D4Q6ZUB0 917 aa17.53■□□□□ 0.4
TNIP1-220ENST00000610535 ACAD11Q709F0 780 aa17.53■□□□□ 0.4
TNIP1-220ENST00000610535 ARHGAP22Q7Z5H3 698 aa17.53■□□□□ 0.4
TNIP1-220ENST00000610535 NIM1KQ8IY84 436 aa17.53■□□□□ 0.4
TNIP1-220ENST00000610535 PIWIL1Q96J94 861 aaKnown RBP17.53■□□□□ 0.4
TNIP1-220ENST00000610535 ZNF668Q96K58 619 aaPredicted RBP17.53■□□□□ 0.4
TNIP1-220ENST00000610535 SDCBP2Q9H190 292 aa17.53■□□□□ 0.4
TNIP1-220ENST00000610535 ETNK2Q9NVF9 386 aa17.53■□□□□ 0.4
TNIP1-220ENST00000610535 LOC100653049A0A140TA62 436 aa17.53■□□□□ 0.4
TNIP1-220ENST00000610535 KRT34O76011 436 aa17.53■□□□□ 0.4
TNIP1-220ENST00000610535 STK10O94804 968 aaKnown RBP17.53■□□□□ 0.4
TNIP1-220ENST00000610535 ENDOD1O94919 500 aa17.53■□□□□ 0.4
TNIP1-220ENST00000610535 PYGLP06737 847 aa17.53■□□□□ 0.4
TNIP1-220ENST00000610535 SRGAP2CP0DJJ0 459 aa17.53■□□□□ 0.4
TNIP1-220ENST00000610535 AP3M2P53677 418 aa17.53■□□□□ 0.4
TNIP1-220ENST00000610535 FSTL1Q12841 308 aa17.53■□□□□ 0.4
TNIP1-220ENST00000610535 SMAD1Q15797 465 aaKnown RBP17.53■□□□□ 0.4
TNIP1-220ENST00000610535 TBCCQ15814 346 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms