RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 FKBP15Q5T1M5 1219 aa14.03□□□□□ -0.16
SENP3-209ENST00000610454 BSPRYQ5W0U4 402 aa14.03□□□□□ -0.16
SENP3-209ENST00000610454 NAIF1Q69YI7 327 aaPredicted RBP14.03□□□□□ -0.16
SENP3-209ENST00000610454 PMF1Q6P1K2 205 aa14.03□□□□□ -0.16
SENP3-209ENST00000610454 RHBDF2Q6PJF5 856 aa14.03□□□□□ -0.16
SENP3-209ENST00000610454 SCML4Q8N228 414 aa14.03□□□□□ -0.16
SENP3-209ENST00000610454 RPLP0P6Q8NHW5 317 aa14.03□□□□□ -0.16
SENP3-209ENST00000610454 SLC35F5Q8WV83 523 aa14.03□□□□□ -0.16
SENP3-209ENST00000610454 IRGQQ8WZA9 623 aa14.03□□□□□ -0.16
SENP3-209ENST00000610454 SHC3Q92529 594 aa14.03□□□□□ -0.16
SENP3-209ENST00000610454 PNKPQ96T60 521 aa14.03□□□□□ -0.16
SENP3-209ENST00000610454 NAT10Q9H0A0 1025 aaKnown RBP14.03□□□□□ -0.16
SENP3-209ENST00000610454 FBRSL1Q9HCM7 1045 aaKnown RBP14.03□□□□□ -0.16
SENP3-209ENST00000610454 ARHGEF4Q9NR80 690 aa14.03□□□□□ -0.16
SENP3-209ENST00000610454 TAB2Q9NYJ8 693 aa14.03□□□□□ -0.16
SENP3-209ENST00000610454 DNAJC12Q9UKB3 198 aa14.03□□□□□ -0.16
SENP3-209ENST00000610454 PRR23AA6NEV1 266 aa14.02□□□□□ -0.17
SENP3-209ENST00000610454 YJEFN3A6XGL0 299 aa14.02□□□□□ -0.17
SENP3-209ENST00000610454 E7ENQ6 273 aa14.02□□□□□ -0.17
SENP3-209ENST00000610454 NEDD8-MDP1E9PL57 170 aa14.02□□□□□ -0.17
SENP3-209ENST00000610454 HOXC11O43248 304 aaPredicted RBP14.02□□□□□ -0.17
SENP3-209ENST00000610454 SART1O43290 800 aaKnown RBP14.02□□□□□ -0.17
SENP3-209ENST00000610454 STC2O76061 302 aa14.02□□□□□ -0.17
SENP3-209ENST00000610454 LMNAP02545 664 aaKnown RBP14.02□□□□□ -0.17
SENP3-209ENST00000610454 SEC13P55735 322 aa14.02□□□□□ -0.17
SENP3-209ENST00000610454 DAOAP59103 153 aa14.02□□□□□ -0.17
SENP3-209ENST00000610454 APBA1Q02410 837 aa14.02□□□□□ -0.17
SENP3-209ENST00000610454 KDSRQ06136 332 aa14.02□□□□□ -0.17
SENP3-209ENST00000610454 SMYD5Q6GMV2 418 aa14.02□□□□□ -0.17
SENP3-209ENST00000610454 TPGS1Q6ZTW0 290 aa14.02□□□□□ -0.17
SENP3-209ENST00000610454 ZNF606Q8WXB4 792 aa14.02□□□□□ -0.17
SENP3-209ENST00000610454 NDRG1Q92597 394 aaKnown RBP14.02□□□□□ -0.17
SENP3-209ENST00000610454 EDEM1Q92611 657 aa14.02□□□□□ -0.17
SENP3-209ENST00000610454 XPO6Q96QU8 1125 aaKnown RBP14.02□□□□□ -0.17
SENP3-209ENST00000610454 HINFPQ9BQA5 517 aa14.02□□□□□ -0.17
SENP3-209ENST00000610454 ZSWIM1Q9BR11 485 aa14.02□□□□□ -0.17
SENP3-209ENST00000610454 TRIM62Q9BVG3 475 aa14.02□□□□□ -0.17
SENP3-209ENST00000610454 BBS2Q9BXC9 721 aa14.02□□□□□ -0.17
SENP3-209ENST00000610454 MIS12Q9H081 205 aa14.02□□□□□ -0.17
SENP3-209ENST00000610454 WDR35Q9P2L0 1181 aa14.02□□□□□ -0.17
SENP3-209ENST00000610454 DEC1Q9P2X7 70 aa14.02□□□□□ -0.17
SENP3-209ENST00000610454 CEP83Q9Y592 693 aa14.02□□□□□ -0.17
SENP3-209ENST00000610454 MYO15AQ9UKN7 3530 aa14.02□□□□□ -0.17
SENP3-209ENST00000610454 KAT7O95251 611 aa14.01□□□□□ -0.17
SENP3-209ENST00000610454 PAPSS2O95340 614 aaPredicted RBP14.01□□□□□ -0.17
SENP3-209ENST00000610454 LTFP02788 710 aa14.01□□□□□ -0.17
SENP3-209ENST00000610454 CYBBP04839 570 aa14.01□□□□□ -0.17
SENP3-209ENST00000610454 CDK11BP21127 795 aaKnown RBP14.01□□□□□ -0.17
SENP3-209ENST00000610454 CORO1AP31146 461 aaKnown RBP14.01□□□□□ -0.17
SENP3-209ENST00000610454 KRT9P35527 623 aa14.01□□□□□ -0.17
SENP3-209ENST00000610454 CHKAP35790 457 aa14.01□□□□□ -0.17
SENP3-209ENST00000610454 HARS2P49590 506 aaKnown RBP14.01□□□□□ -0.17
SENP3-209ENST00000610454 BPIFB4P59827 614 aa14.01□□□□□ -0.17
SENP3-209ENST00000610454 HEATR6Q6AI08 1181 aaKnown RBP14.01□□□□□ -0.17
SENP3-209ENST00000610454 C11orf57Q6ZUT1 292 aaPredicted RBP14.01□□□□□ -0.17
SENP3-209ENST00000610454 ASCL5Q7RTU5 278 aa14.01□□□□□ -0.17
SENP3-209ENST00000610454 TMEM25Q86YD3 366 aa14.01□□□□□ -0.17
SENP3-209ENST00000610454 FMNL3Q8IVF7 1028 aa14.01□□□□□ -0.17
SENP3-209ENST00000610454 NAT16Q8N8M0 369 aa14.01□□□□□ -0.17
SENP3-209ENST00000610454 ZBTB44Q8NCP5 570 aa14.01□□□□□ -0.17
SENP3-209ENST00000610454 WBP2Q969T9 261 aa14.01□□□□□ -0.17
SENP3-209ENST00000610454 FAM149B1Q96BN6 582 aa14.01□□□□□ -0.17
SENP3-209ENST00000610454 PLD4Q96BZ4 506 aa14.01□□□□□ -0.17
SENP3-209ENST00000610454 NOX5Q96PH1 765 aa14.01□□□□□ -0.17
SENP3-209ENST00000610454 LSM14BQ9BX40 385 aaKnown RBP14.01□□□□□ -0.17
SENP3-209ENST00000610454 VPS16Q9H269 839 aa14.01□□□□□ -0.17
SENP3-209ENST00000610454 PDCL3Q9H2J4 239 aa14.01□□□□□ -0.17
SENP3-209ENST00000610454 DNAJC17Q9NVM6 304 aaKnown RBP14.01□□□□□ -0.17
SENP3-209ENST00000610454 FANCLQ9NW38 375 aa14.01□□□□□ -0.17
SENP3-209ENST00000610454 RAB23Q9ULC3 237 aa14.01□□□□□ -0.17
SENP3-209ENST00000610454 KIAA1549LQ6ZVL6 1849 aa14.01□□□□□ -0.17
SENP3-209ENST00000610454 USP34Q70CQ2 3546 aa14.01□□□□□ -0.17
SENP3-209ENST00000610454 TBC1D3BA6NDS4 549 aa14□□□□□ -0.17
SENP3-209ENST00000610454 BECN2A8MW95 431 aa14□□□□□ -0.17
SENP3-209ENST00000610454 CHURC1-FNTBB4DL54 471 aa14□□□□□ -0.17
SENP3-209ENST00000610454 CAPN9O14815 690 aa14□□□□□ -0.17
SENP3-209ENST00000610454 TYRP14679 529 aa14□□□□□ -0.17
SENP3-209ENST00000610454 GRIA2P42262 883 aa14□□□□□ -0.17
SENP3-209ENST00000610454 GPD2P43304 727 aa14□□□□□ -0.17
SENP3-209ENST00000610454 SLC6A11P48066 632 aa14□□□□□ -0.17
SENP3-209ENST00000610454 SNX16P57768 344 aa14□□□□□ -0.17
SENP3-209ENST00000610454 TYRO3Q06418 890 aa14□□□□□ -0.17
SENP3-209ENST00000610454 KRT31Q15323 416 aa14□□□□□ -0.17
SENP3-209ENST00000610454 GAB4Q2WGN9 574 aa14□□□□□ -0.17
SENP3-209ENST00000610454 C2orf27AQ580R0 203 aa14□□□□□ -0.17
SENP3-209ENST00000610454 CDKAL1Q5VV42 579 aa14□□□□□ -0.17
SENP3-209ENST00000610454 GRAMD4Q6IC98 578 aa14□□□□□ -0.17
SENP3-209ENST00000610454 CAVIN1Q6NZI2 390 aaKnown RBP14□□□□□ -0.17
SENP3-209ENST00000610454 DENND1BQ6P3S1 775 aa14□□□□□ -0.17
SENP3-209ENST00000610454 BHLHA9Q7RTU4 235 aa14□□□□□ -0.17
SENP3-209ENST00000610454 C12orf40Q86WS4 652 aa14□□□□□ -0.17
SENP3-209ENST00000610454 DENND1CQ8IV53 801 aa14□□□□□ -0.17
SENP3-209ENST00000610454 STK32AQ8WU08 396 aa14□□□□□ -0.17
SENP3-209ENST00000610454 BHMTQ93088 406 aa14□□□□□ -0.17
SENP3-209ENST00000610454 SIX2Q9NPC8 291 aa14□□□□□ -0.17
SENP3-209ENST00000610454 HBS1LQ9Y450 684 aaKnown RBP14□□□□□ -0.17
SENP3-209ENST00000610454 WDR87Q6ZQQ6 2873 aa13.99□□□□□ -0.17
SENP3-209ENST00000610454 K7ESF4 209 aa13.99□□□□□ -0.17
SENP3-209ENST00000610454 GREM1O60565 184 aa13.99□□□□□ -0.17
SENP3-209ENST00000610454 TULP3O75386 442 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms