RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 FYNP06241 537 aa13.37□□□□□ -0.27
CD9-212ENST00000610354 RALAP11233 206 aa13.37□□□□□ -0.27
CD9-212ENST00000610354 PLA2G5P39877 138 aa13.37□□□□□ -0.27
CD9-212ENST00000610354 MAGEA9P43362 315 aa13.37□□□□□ -0.27
CD9-212ENST00000610354 SLC6A11P48066 632 aa13.37□□□□□ -0.27
CD9-212ENST00000610354 EFEMP1Q12805 493 aa13.37□□□□□ -0.27
CD9-212ENST00000610354 MEA1Q16626 185 aa13.37□□□□□ -0.27
CD9-212ENST00000610354 LY6G5CQ5SRR4 150 aa13.37□□□□□ -0.27
CD9-212ENST00000610354 BSPRYQ5W0U4 402 aa13.37□□□□□ -0.27
CD9-212ENST00000610354 SMYD5Q6GMV2 418 aa13.37□□□□□ -0.27
CD9-212ENST00000610354 PKN3Q6P5Z2 889 aa13.37□□□□□ -0.27
CD9-212ENST00000610354 Q6ZNB5 142 aa13.37□□□□□ -0.27
CD9-212ENST00000610354 SLC47A2Q86VL8 602 aa13.37□□□□□ -0.27
CD9-212ENST00000610354 C12orf40Q86WS4 652 aa13.37□□□□□ -0.27
CD9-212ENST00000610354 TMEM25Q86YD3 366 aa13.37□□□□□ -0.27
CD9-212ENST00000610354 MIB1Q86YT6 1006 aa13.37□□□□□ -0.27
CD9-212ENST00000610354 ARHGAP18Q8N392 663 aa13.37□□□□□ -0.27
CD9-212ENST00000610354 EDEM1Q92611 657 aa13.37□□□□□ -0.27
CD9-212ENST00000610354 NACA2Q9H009 215 aa13.37□□□□□ -0.27
CD9-212ENST00000610354 MIS12Q9H081 205 aa13.37□□□□□ -0.27
CD9-212ENST00000610354 SPATA6Q9NWH7 488 aaPredicted RBP13.37□□□□□ -0.27
CD9-212ENST00000610354 PCDHGC3Q9UN70 934 aa13.37□□□□□ -0.27
CD9-212ENST00000610354 SH3BP1Q9Y3L3 701 aa13.37□□□□□ -0.27
CD9-212ENST00000610354 MYO18AQ92614 2054 aaKnown RBP13.36□□□□□ -0.27
CD9-212ENST00000610354 LGALS16A8MUM7 142 aa13.36□□□□□ -0.27
CD9-212ENST00000610354 SLC9A3R1O14745 358 aaPredicted RBP13.36□□□□□ -0.27
CD9-212ENST00000610354 PAPSS1O43252 624 aaPredicted RBP13.36□□□□□ -0.27
CD9-212ENST00000610354 SP9P0CG40 484 aa13.36□□□□□ -0.27
CD9-212ENST00000610354 TDGF1P13385 188 aa13.36□□□□□ -0.27
CD9-212ENST00000610354 RAPGEF1Q13905 1077 aa13.36□□□□□ -0.27
CD9-212ENST00000610354 DGKKQ5KSL6 1271 aa13.36□□□□□ -0.27
CD9-212ENST00000610354 BTBD8Q5XKL5 378 aa13.36□□□□□ -0.27
CD9-212ENST00000610354 C1orf228Q6PIY5 440 aa13.36□□□□□ -0.27
CD9-212ENST00000610354 TMEM110Q86TL2 294 aa13.36□□□□□ -0.27
CD9-212ENST00000610354 SFTPA1Q8IWL2 248 aa13.36□□□□□ -0.27
CD9-212ENST00000610354 SIX6OS1Q8N1H7 587 aa13.36□□□□□ -0.27
CD9-212ENST00000610354 STK32AQ8WU08 396 aa13.36□□□□□ -0.27
CD9-212ENST00000610354 IRGQQ8WZA9 623 aa13.36□□□□□ -0.27
CD9-212ENST00000610354 DDX1Q92499 740 aaKnown RBP13.36□□□□□ -0.27
CD9-212ENST00000610354 P2RY13Q9BPV8 354 aa13.36□□□□□ -0.27
CD9-212ENST00000610354 STK33Q9BYT3 514 aa13.36□□□□□ -0.27
CD9-212ENST00000610354 POLR3BQ9NW08 1133 aaPredicted RBP13.36□□□□□ -0.27
CD9-212ENST00000610354 TBC1D14Q9P2M4 693 aa13.36□□□□□ -0.27
CD9-212ENST00000610354 SFMBT1Q9UHJ3 866 aa13.36□□□□□ -0.27
CD9-212ENST00000610354 SLC12A8A0AV02 714 aa13.35□□□□□ -0.27
CD9-212ENST00000610354 E5RJQ4 531 aa13.35□□□□□ -0.27
CD9-212ENST00000610354 TEX33O43247 280 aa13.35□□□□□ -0.27
CD9-212ENST00000610354 MED7O43513 233 aa13.35□□□□□ -0.27
CD9-212ENST00000610354 HMBSP08397 361 aa13.35□□□□□ -0.27
CD9-212ENST00000610354 CHRM1P11229 460 aaPredicted RBP13.35□□□□□ -0.27
CD9-212ENST00000610354 ZNF165P49910 485 aa13.35□□□□□ -0.27
CD9-212ENST00000610354 JAM2P57087 298 aa13.35□□□□□ -0.27
CD9-212ENST00000610354 PTK2Q05397 1052 aa13.35□□□□□ -0.27
CD9-212ENST00000610354 NR1H3Q13133 447 aa13.35□□□□□ -0.27
CD9-212ENST00000610354 SYCP1Q15431 976 aa13.35□□□□□ -0.27
CD9-212ENST00000610354 TSSK4Q6SA08 328 aa13.35□□□□□ -0.27
CD9-212ENST00000610354 MAMSTRQ6ZN01 415 aa13.35□□□□□ -0.27
CD9-212ENST00000610354 PASD1Q8IV76 773 aa13.35□□□□□ -0.27
CD9-212ENST00000610354 SCUBE3Q8IX30 993 aa13.35□□□□□ -0.27
CD9-212ENST00000610354 PHTF2Q8N3S3 785 aa13.35□□□□□ -0.27
CD9-212ENST00000610354 ATOH1Q92858 354 aaPredicted RBP13.35□□□□□ -0.27
CD9-212ENST00000610354 CD101Q93033 1021 aa13.35□□□□□ -0.27
CD9-212ENST00000610354 OTUB2Q96DC9 234 aa13.35□□□□□ -0.27
CD9-212ENST00000610354 PIWIL1Q96J94 861 aaKnown RBP13.35□□□□□ -0.27
CD9-212ENST00000610354 CPXM1Q96SM3 734 aa13.35□□□□□ -0.27
CD9-212ENST00000610354 PRMT8Q9NR22 394 aaPredicted RBP13.35□□□□□ -0.27
CD9-212ENST00000610354 SPHK2Q9NRA0 654 aa13.35□□□□□ -0.27
CD9-212ENST00000610354 FAM207AQ9NSI2 230 aaPredicted RBP13.35□□□□□ -0.27
CD9-212ENST00000610354 MARCH2Q9P0N8 246 aa13.35□□□□□ -0.27
CD9-212ENST00000610354 F8VZ95 297 aa13.34□□□□□ -0.27
CD9-212ENST00000610354 FBXO21O94952 628 aa13.34□□□□□ -0.27
CD9-212ENST00000610354 LTFP02788 710 aa13.34□□□□□ -0.27
CD9-212ENST00000610354 ADH5P11766 374 aa13.34□□□□□ -0.27
CD9-212ENST00000610354 CYP11B1P15538 503 aa13.34□□□□□ -0.27
CD9-212ENST00000610354 CDK11BP21127 795 aaKnown RBP13.34□□□□□ -0.27
CD9-212ENST00000610354 POLR2FP61218 127 aaKnown RBP13.34□□□□□ -0.27
CD9-212ENST00000610354 SATB1Q01826 763 aa13.34□□□□□ -0.27
CD9-212ENST00000610354 PDCLQ13371 301 aa13.34□□□□□ -0.27
CD9-212ENST00000610354 LRRC32Q14392 662 aa13.34□□□□□ -0.27
CD9-212ENST00000610354 TRIP4Q15650 581 aaPredicted RBP13.34□□□□□ -0.27
CD9-212ENST00000610354 FKBP15Q5T1M5 1219 aa13.34□□□□□ -0.27
CD9-212ENST00000610354 MSANTD2Q6P1R3 559 aa13.34□□□□□ -0.27
CD9-212ENST00000610354 RSRC2Q7L4I2 434 aaKnown RBP13.34□□□□□ -0.27
CD9-212ENST00000610354 TADA2BQ86TJ2 420 aa13.34□□□□□ -0.27
CD9-212ENST00000610354 NOP9Q86U38 636 aaKnown RBP13.34□□□□□ -0.27
CD9-212ENST00000610354 FMNL3Q8IVF7 1028 aa13.34□□□□□ -0.27
CD9-212ENST00000610354 ETFBKMTQ8IXQ9 262 aa13.34□□□□□ -0.27
CD9-212ENST00000610354 C1orf131Q8NDD1 294 aaKnown RBP13.34□□□□□ -0.27
CD9-212ENST00000610354 NELL1Q92832 810 aa13.34□□□□□ -0.27
CD9-212ENST00000610354 FAM122AQ96E09 287 aa13.34□□□□□ -0.27
CD9-212ENST00000610354 ERGIC2Q96RQ1 377 aa13.34□□□□□ -0.27
CD9-212ENST00000610354 CDK5RAP1Q96SZ6 601 aaKnown RBP13.34□□□□□ -0.27
CD9-212ENST00000610354 LHX5Q9H2C1 402 aa13.34□□□□□ -0.27
CD9-212ENST00000610354 CBX8Q9HC52 389 aa13.34□□□□□ -0.27
CD9-212ENST00000610354 NLRC4Q9NPP4 1024 aa13.34□□□□□ -0.27
CD9-212ENST00000610354 ST7Q9NRC1 585 aa13.34□□□□□ -0.27
CD9-212ENST00000610354 ABCC13Q9NSE7 274 aa13.34□□□□□ -0.27
CD9-212ENST00000610354 K7EQS6 105 aa13.33□□□□□ -0.28
CD9-212ENST00000610354 TRIM24O15164 1050 aa13.33□□□□□ -0.28
CD9-212ENST00000610354 HOXC11O43248 304 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms