RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 DNAJC28Q9NX36 388 aa23.17■■□□□ 1.3
SHANK2-220ENST00000608988 PCSK1NQ9UHG2 260 aa23.17■■□□□ 1.3
SHANK2-220ENST00000608988 OGTO15294 1046 aa23.16■■□□□ 1.3
SHANK2-220ENST00000608988 ZNF394Q53GI3 561 aa23.16■■□□□ 1.3
SHANK2-220ENST00000608988 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.16■■□□□ 1.3
SHANK2-220ENST00000608988 OPTNQ96CV9 577 aa23.16■■□□□ 1.3
SHANK2-220ENST00000608988 RNF157Q96PX1 679 aa23.16■■□□□ 1.3
SHANK2-220ENST00000608988 DDX50Q9BQ39 737 aaKnown RBP23.16■■□□□ 1.3
SHANK2-220ENST00000608988 CNPY3Q9BT09 278 aa23.16■■□□□ 1.3
SHANK2-220ENST00000608988 SLC13A1Q9BZW2 595 aa23.16■■□□□ 1.3
SHANK2-220ENST00000608988 NRDE2Q9H7Z3 1164 aa23.16■■□□□ 1.3
SHANK2-220ENST00000608988 ZNF302Q9NR11 478 aa23.16■■□□□ 1.3
SHANK2-220ENST00000608988 ETNK2Q9NVF9 386 aa23.16■■□□□ 1.3
SHANK2-220ENST00000608988 KIAA1217Q5T5P2 1943 aa23.15■■□□□ 1.3
SHANK2-220ENST00000608988 CCDC195A0A1B0GUA6 201 aa23.15■■□□□ 1.3
SHANK2-220ENST00000608988 SLC15A5A6NIM6 579 aa23.15■■□□□ 1.3
SHANK2-220ENST00000608988 ATP9BO43861 1147 aa23.15■■□□□ 1.3
SHANK2-220ENST00000608988 RGS20O76081 388 aa23.15■■□□□ 1.3
SHANK2-220ENST00000608988 C6orf222P0C671 652 aaPredicted RBP23.15■■□□□ 1.3
SHANK2-220ENST00000608988 TPSB2P20231 275 aa23.15■■□□□ 1.3
SHANK2-220ENST00000608988 ACAT1P24752 427 aaKnown RBP23.15■■□□□ 1.3
SHANK2-220ENST00000608988 OAZ1P54368 228 aa23.15■■□□□ 1.3
SHANK2-220ENST00000608988 MTM1Q13496 603 aa23.15■■□□□ 1.3
SHANK2-220ENST00000608988 TPSAB1Q15661 275 aa23.15■■□□□ 1.3
SHANK2-220ENST00000608988 MDH1BQ5I0G3 518 aa23.15■■□□□ 1.3
SHANK2-220ENST00000608988 GSTCDQ8NEC7 633 aa23.15■■□□□ 1.3
SHANK2-220ENST00000608988 PPP1R14CQ8TAE6 165 aa23.15■■□□□ 1.3
SHANK2-220ENST00000608988 CMTM5Q96DZ9 223 aa23.15■■□□□ 1.3
SHANK2-220ENST00000608988 EPAS1Q99814 870 aa23.15■■□□□ 1.3
SHANK2-220ENST00000608988 PLAC1Q9HBJ0 212 aa23.15■■□□□ 1.3
SHANK2-220ENST00000608988 RGS17Q9UGC6 210 aaPredicted RBP23.15■■□□□ 1.3
SHANK2-220ENST00000608988 CYTH4Q9UIA0 394 aa23.15■■□□□ 1.3
SHANK2-220ENST00000608988 ARHGAP42A6NI28 874 aa23.15■■□□□ 1.3
SHANK2-220ENST00000608988 ZNF487B1APH4 448 aa23.15■■□□□ 1.3
SHANK2-220ENST00000608988 CREB3O43889 395 aa23.15■■□□□ 1.3
SHANK2-220ENST00000608988 AVILO75366 819 aa23.15■■□□□ 1.3
SHANK2-220ENST00000608988 TNNC2P02585 160 aa23.15■■□□□ 1.3
SHANK2-220ENST00000608988 ERBB2P04626 1255 aa23.15■■□□□ 1.3
SHANK2-220ENST00000608988 CD19P15391 556 aa23.15■■□□□ 1.3
SHANK2-220ENST00000608988 ALOX15P16050 662 aaPredicted RBP23.15■■□□□ 1.3
SHANK2-220ENST00000608988 CDH6P55285 790 aa23.15■■□□□ 1.3
SHANK2-220ENST00000608988 PDE1BQ01064 536 aa23.15■■□□□ 1.3
SHANK2-220ENST00000608988 NAB1Q13506 487 aa23.15■■□□□ 1.3
SHANK2-220ENST00000608988 UBAP2LQ14157 1087 aaKnown RBP23.15■■□□□ 1.3
SHANK2-220ENST00000608988 MAP7Q14244 749 aa23.15■■□□□ 1.3
SHANK2-220ENST00000608988 LRRC23Q53EV4 343 aaPredicted RBP23.15■■□□□ 1.3
SHANK2-220ENST00000608988 CFAP157Q5JU67 520 aa23.15■■□□□ 1.3
SHANK2-220ENST00000608988 UNC5AQ6ZN44 842 aa23.15■■□□□ 1.3
SHANK2-220ENST00000608988 NAT14Q8WUY8 206 aa23.15■■□□□ 1.3
SHANK2-220ENST00000608988 CPXM1Q96SM3 734 aa23.15■■□□□ 1.3
SHANK2-220ENST00000608988 NDNQ99608 321 aa23.15■■□□□ 1.3
SHANK2-220ENST00000608988 EBNA1BP2Q99848 306 aaKnown RBP23.15■■□□□ 1.3
SHANK2-220ENST00000608988 XYLT2Q9H1B5 865 aa23.15■■□□□ 1.3
SHANK2-220ENST00000608988 TMCO1Q9UM00 188 aa23.15■■□□□ 1.3
SHANK2-220ENST00000608988 VWA5AO00534 786 aa23.14■■□□□ 1.29
SHANK2-220ENST00000608988 KCNN4O15554 427 aa23.14■■□□□ 1.29
SHANK2-220ENST00000608988 CSH1P0DML2 217 aa23.14■■□□□ 1.29
SHANK2-220ENST00000608988 CSH2P0DML3 217 aa23.14■■□□□ 1.29
SHANK2-220ENST00000608988 KITP10721 976 aa23.14■■□□□ 1.29
SHANK2-220ENST00000608988 GRK2P25098 689 aa23.14■■□□□ 1.29
SHANK2-220ENST00000608988 MBLAC2Q68D91 279 aa23.14■■□□□ 1.29
SHANK2-220ENST00000608988 ZNF772Q68DY9 489 aaPredicted RBP23.14■■□□□ 1.29
SHANK2-220ENST00000608988 NPNTQ6UXI9 565 aa23.14■■□□□ 1.29
SHANK2-220ENST00000608988 EMC1Q8N766 993 aa23.14■■□□□ 1.29
SHANK2-220ENST00000608988 B4GALNT2Q8NHY0 566 aa23.14■■□□□ 1.29
SHANK2-220ENST00000608988 BCO2Q9BYV7 579 aa23.14■■□□□ 1.29
SHANK2-220ENST00000608988 SMYD2Q9NRG4 433 aa23.14■■□□□ 1.29
SHANK2-220ENST00000608988 ATXN10Q9UBB4 475 aa23.14■■□□□ 1.29
SHANK2-220ENST00000608988 CPSF3Q9UKF6 684 aaKnown RBP23.14■■□□□ 1.29
SHANK2-220ENST00000608988 PCDHA11Q9Y5I1 949 aa23.14■■□□□ 1.29
SHANK2-220ENST00000608988 DOCK5Q9H7D0 1870 aa23.14■■□□□ 1.29
SHANK2-220ENST00000608988 GLRA3O75311 464 aa23.13■■□□□ 1.29
SHANK2-220ENST00000608988 USP1O94782 785 aa23.13■■□□□ 1.29
SHANK2-220ENST00000608988 ZBED1O96006 694 aa23.13■■□□□ 1.29
SHANK2-220ENST00000608988 EDN1P05305 212 aa23.13■■□□□ 1.29
SHANK2-220ENST00000608988 VCLP18206 1134 aa23.13■■□□□ 1.29
SHANK2-220ENST00000608988 GPD1P21695 349 aa23.13■■□□□ 1.29
SHANK2-220ENST00000608988 CCNIQ14094 377 aa23.13■■□□□ 1.29
SHANK2-220ENST00000608988 ANKRD20A4Q4UJ75 823 aa23.13■■□□□ 1.29
SHANK2-220ENST00000608988 FASTKD1Q53R41 847 aaKnown RBP23.13■■□□□ 1.29
SHANK2-220ENST00000608988 CDKL3Q8IVW4 592 aaPredicted RBP23.13■■□□□ 1.29
SHANK2-220ENST00000608988 FAM81AQ8TBF8 368 aa23.13■■□□□ 1.29
SHANK2-220ENST00000608988 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.13■■□□□ 1.292e-6■■■■□ 20
SHANK2-220ENST00000608988 MARCOQ9UEW3 520 aaPredicted RBP23.13■■□□□ 1.29
SHANK2-220ENST00000608988 CYB561D2O14569 222 aa23.13■■□□□ 1.29
SHANK2-220ENST00000608988 APOL1O14791 398 aa23.13■■□□□ 1.29
SHANK2-220ENST00000608988 OPHN1O60890 802 aa23.13■■□□□ 1.29
SHANK2-220ENST00000608988 SERPINE1P05121 402 aa23.13■■□□□ 1.29
SHANK2-220ENST00000608988 CAPSQ13938 189 aa23.13■■□□□ 1.29
SHANK2-220ENST00000608988 TEDDM1Q5T9Z0 273 aa23.13■■□□□ 1.29
SHANK2-220ENST00000608988 RTKN2Q8IZC4 609 aa23.13■■□□□ 1.29
SHANK2-220ENST00000608988 PLD5Q8N7P1 536 aa23.13■■□□□ 1.29
SHANK2-220ENST00000608988 PPP4R1Q8TF05 950 aa23.13■■□□□ 1.29
SHANK2-220ENST00000608988 ATP2A3Q93084 1043 aa23.13■■□□□ 1.29
SHANK2-220ENST00000608988 ANKRD36BP1Q96IX9 119 aa23.13■■□□□ 1.29
SHANK2-220ENST00000608988 ADPGKQ9BRR6 497 aa23.13■■□□□ 1.29
SHANK2-220ENST00000608988 MAD1L1Q9Y6D9 718 aa23.13■■□□□ 1.29
SHANK2-220ENST00000608988 B4GALT4O60513 344 aa23.12■■□□□ 1.29
SHANK2-220ENST00000608988 HARSP12081 509 aaKnown RBP23.12■■□□□ 1.29
SHANK2-220ENST00000608988 TNFSF9P41273 254 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms