RNA–Protein interactions for RNA: ENST00000602897.1

PPFIA3-212, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 1,615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-212ENST00000602897 SPATA2LQ8IUW3 424 aaPredicted RBP23.27■■□□□ 1.32
PPFIA3-212ENST00000602897 PSTKQ8IV42 348 aaKnown RBP23.27■■□□□ 1.32
PPFIA3-212ENST00000602897 NT5C3BQ969T7 300 aa23.27■■□□□ 1.32
PPFIA3-212ENST00000602897 POPDC2Q9HBU9 364 aa23.27■■□□□ 1.32
PPFIA3-212ENST00000602897 NGRNQ9NPE2 291 aaKnown RBP23.27■■□□□ 1.32
PPFIA3-212ENST00000602897 DRG1Q9Y295 367 aaKnown RBP23.27■■□□□ 1.32
PPFIA3-212ENST00000602897 CSPG5O95196 566 aa23.26■■□□□ 1.31
PPFIA3-212ENST00000602897 GAS8O95995 478 aa23.26■■□□□ 1.31
PPFIA3-212ENST00000602897 FGFR3P22607 806 aa23.26■■□□□ 1.31
PPFIA3-212ENST00000602897 SLC11A1P49279 550 aa23.26■■□□□ 1.31
PPFIA3-212ENST00000602897 DAOAP59103 153 aa23.26■■□□□ 1.31
PPFIA3-212ENST00000602897 PM20D1Q6GTS8 502 aa23.26■■□□□ 1.31
PPFIA3-212ENST00000602897 BBS12Q6ZW61 710 aa23.26■■□□□ 1.31
PPFIA3-212ENST00000602897 CYP4V2Q6ZWL3 525 aaPredicted RBP23.26■■□□□ 1.31
PPFIA3-212ENST00000602897 BEND5Q7L4P6 421 aa23.26■■□□□ 1.31
PPFIA3-212ENST00000602897 DEFB106AQ8N104 65 aa23.26■■□□□ 1.31
PPFIA3-212ENST00000602897 COLGALT1Q8NBJ5 622 aa23.26■■□□□ 1.31
PPFIA3-212ENST00000602897 C1orf54Q8WWF1 131 aa23.26■■□□□ 1.31
PPFIA3-212ENST00000602897 KCNK16Q96T55 309 aa23.26■■□□□ 1.31
PPFIA3-212ENST00000602897 ACBD3Q9H3P7 528 aa23.26■■□□□ 1.31
PPFIA3-212ENST00000602897 TMLHEQ9NVH6 421 aa23.26■■□□□ 1.31
PPFIA3-212ENST00000602897 KLHL11Q9NVR0 708 aa23.26■■□□□ 1.31
PPFIA3-212ENST00000602897 CARNS1A5YM72 827 aa23.26■■□□□ 1.31
PPFIA3-212ENST00000602897 ZSCAN5CA6NGD5 496 aaPredicted RBP23.26■■□□□ 1.31
PPFIA3-212ENST00000602897 ZBED1O96006 694 aa23.26■■□□□ 1.31
PPFIA3-212ENST00000602897 GALTP07902 379 aa23.26■■□□□ 1.31
PPFIA3-212ENST00000602897 BDNFP23560 247 aa23.26■■□□□ 1.31
PPFIA3-212ENST00000602897 ARSEP51690 589 aa23.26■■□□□ 1.31
PPFIA3-212ENST00000602897 HDAC4P56524 1084 aa23.26■■□□□ 1.31
PPFIA3-212ENST00000602897 SMARCB1Q12824 385 aa23.26■■□□□ 1.31
PPFIA3-212ENST00000602897 CDO1Q16878 200 aa23.26■■□□□ 1.31
PPFIA3-212ENST00000602897 KCNT1Q5JUK3 1230 aa23.26■■□□□ 1.31
PPFIA3-212ENST00000602897 SH3PXD2AQ5TCZ1 1133 aa23.26■■□□□ 1.31
PPFIA3-212ENST00000602897 ANKS1BQ7Z6G8 1248 aa23.26■■□□□ 1.31
PPFIA3-212ENST00000602897 FAM71BQ8TC56 605 aa23.26■■□□□ 1.31
PPFIA3-212ENST00000602897 SPPL3Q8TCT6 385 aa23.26■■□□□ 1.31
PPFIA3-212ENST00000602897 ATXN2LQ8WWM7 1075 aaKnown RBP23.26■■□□□ 1.31
PPFIA3-212ENST00000602897 FAM149B1Q96BN6 582 aa23.26■■□□□ 1.31
PPFIA3-212ENST00000602897 PEBP4Q96S96 227 aa23.26■■□□□ 1.31
PPFIA3-212ENST00000602897 ULBP1Q9BZM6 244 aa23.26■■□□□ 1.31
PPFIA3-212ENST00000602897 FAM53CQ9NYF3 392 aa23.26■■□□□ 1.31
PPFIA3-212ENST00000602897 NFU1Q9UMS0 254 aa23.26■■□□□ 1.31
PPFIA3-212ENST00000602897 ESYT3A0FGR9 886 aa23.25■■□□□ 1.31
PPFIA3-212ENST00000602897 H7C4K7 107 aa23.25■■□□□ 1.31
PPFIA3-212ENST00000602897 KRT10P13645 584 aa23.25■■□□□ 1.31
PPFIA3-212ENST00000602897 NDUFV1P49821 464 aa23.25■■□□□ 1.31
PPFIA3-212ENST00000602897 TFDP2Q14188 446 aa23.25■■□□□ 1.31
PPFIA3-212ENST00000602897 CASP8Q14790 479 aa23.25■■□□□ 1.31
PPFIA3-212ENST00000602897 SMTNL2Q2TAL5 461 aa23.25■■□□□ 1.31
PPFIA3-212ENST00000602897 VARS2Q5ST30 1063 aaKnown RBP23.25■■□□□ 1.31
PPFIA3-212ENST00000602897 SCYL2Q6P3W7 929 aa23.25■■□□□ 1.31
PPFIA3-212ENST00000602897 BNIPLQ7Z465 357 aa23.25■■□□□ 1.31
PPFIA3-212ENST00000602897 HSPH1Q92598 858 aa23.25■■□□□ 1.31
PPFIA3-212ENST00000602897 HLA-CQ95604 372 aa23.25■■□□□ 1.31
PPFIA3-212ENST00000602897 NPY6RQ99463 290 aa23.25■■□□□ 1.31
PPFIA3-212ENST00000602897 HINFPQ9BQA5 517 aa23.25■■□□□ 1.31
PPFIA3-212ENST00000602897 NSUN3Q9H649 340 aaKnown RBP23.25■■□□□ 1.31
PPFIA3-212ENST00000602897 PRDM16Q9HAZ2 1276 aa23.25■■□□□ 1.31
PPFIA3-212ENST00000602897 CHST7Q9NS84 486 aa23.25■■□□□ 1.31
PPFIA3-212ENST00000602897 DAPK3O43293 454 aa23.24■■□□□ 1.31
PPFIA3-212ENST00000602897 FGF18O76093 207 aa23.24■■□□□ 1.31
PPFIA3-212ENST00000602897 CACNA2D1P54289 1103 aa23.24■■□□□ 1.31
PPFIA3-212ENST00000602897 ERMARDQ5T6L9 678 aa23.24■■□□□ 1.31
PPFIA3-212ENST00000602897 FAM171A1Q5VUB5 890 aa23.24■■□□□ 1.31
PPFIA3-212ENST00000602897 KAZNQ674X7 775 aa23.24■■□□□ 1.31
PPFIA3-212ENST00000602897 ZNF280DQ6N043 979 aa23.24■■□□□ 1.31
PPFIA3-212ENST00000602897 VSTM1Q6UX27 236 aa23.24■■□□□ 1.31
PPFIA3-212ENST00000602897 ZNF558Q96NG5 402 aa23.24■■□□□ 1.31
PPFIA3-212ENST00000602897 TMEM209Q96SK2 561 aa23.24■■□□□ 1.31
PPFIA3-212ENST00000602897 TMEM51Q9NW97 253 aa23.24■■□□□ 1.31
PPFIA3-212ENST00000602897 MARCH5Q9NX47 278 aa23.24■■□□□ 1.31
PPFIA3-212ENST00000602897 R3HDM2Q9Y2K5 976 aaKnown RBP23.24■■□□□ 1.31
PPFIA3-212ENST00000602897 USP3Q9Y6I4 520 aa23.24■■□□□ 1.31
PPFIA3-212ENST00000602897 LIASO43766 372 aa23.23■■□□□ 1.31
PPFIA3-212ENST00000602897 DNAJB1P25685 340 aa23.23■■□□□ 1.31
PPFIA3-212ENST00000602897 PBX3P40426 434 aa23.23■■□□□ 1.31
PPFIA3-212ENST00000602897 MAGEA11P43364 429 aa23.23■■□□□ 1.31
PPFIA3-212ENST00000602897 AIF1P55008 147 aa23.23■■□□□ 1.31
PPFIA3-212ENST00000602897 CDH6P55285 790 aa23.23■■□□□ 1.31
PPFIA3-212ENST00000602897 TFF2Q03403 129 aa23.23■■□□□ 1.31
PPFIA3-212ENST00000602897 CAMK1Q14012 370 aa23.23■■□□□ 1.31
PPFIA3-212ENST00000602897 HLTFQ14527 1009 aaKnown RBP eCLIP23.23■■□□□ 1.31
PPFIA3-212ENST00000602897 LLGL1Q15334 1064 aa23.23■■□□□ 1.31
PPFIA3-212ENST00000602897 PPP1R7Q15435 360 aa23.23■■□□□ 1.31
PPFIA3-212ENST00000602897 TCEAL5Q5H9L2 206 aa23.23■■□□□ 1.31
PPFIA3-212ENST00000602897 FUT10Q6P4F1 479 aa23.23■■□□□ 1.31
PPFIA3-212ENST00000602897 KCNT2Q6UVM3 1135 aa23.23■■□□□ 1.31
PPFIA3-212ENST00000602897 CCHCR1Q8TD31 782 aa23.23■■□□□ 1.31
PPFIA3-212ENST00000602897 POF1BQ8WVV4 589 aa23.23■■□□□ 1.31
PPFIA3-212ENST00000602897 NKD2Q969F2 451 aaPredicted RBP23.23■■□□□ 1.31
PPFIA3-212ENST00000602897 TRIM51Q9BSJ1 452 aa23.23■■□□□ 1.31
PPFIA3-212ENST00000602897 MAK16Q9BXY0 300 aaKnown RBP23.23■■□□□ 1.31
PPFIA3-212ENST00000602897 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.23■■□□□ 1.31
PPFIA3-212ENST00000602897 TMEM30AQ9NV96 361 aa23.23■■□□□ 1.31
PPFIA3-212ENST00000602897 OGFRQ9NZT2 677 aa23.23■■□□□ 1.31
PPFIA3-212ENST00000602897 KIAA1671Q9BY89 1806 aa23.23■■□□□ 1.31
PPFIA3-212ENST00000602897 TNNT3P45378 269 aaPredicted RBP23.22■■□□□ 1.31
PPFIA3-212ENST00000602897 PTK6Q13882 451 aa23.22■■□□□ 1.31
PPFIA3-212ENST00000602897 KRT81Q14533 505 aa23.22■■□□□ 1.31
PPFIA3-212ENST00000602897 CTXN3Q4LDR2 81 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms