RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 FAM196BA6NMK8 535 aa9.15□□□□□ -0.94
COMMD3-215ENST00000602574 PJA2O43164 708 aa9.15□□□□□ -0.94
COMMD3-215ENST00000602574 SLITRK3O94933 977 aa9.15□□□□□ -0.94
COMMD3-215ENST00000602574 STAU1O95793 577 aaKnown RBP9.15□□□□□ -0.94
COMMD3-215ENST00000602574 CAPNS1P04632 268 aa9.15□□□□□ -0.94
COMMD3-215ENST00000602574 HLA-FP30511 346 aa9.15□□□□□ -0.94
COMMD3-215ENST00000602574 ARL1P40616 181 aaPredicted RBP9.15□□□□□ -0.94
COMMD3-215ENST00000602574 BTDP43251 543 aa9.15□□□□□ -0.94
COMMD3-215ENST00000602574 ARSDP51689 593 aa9.15□□□□□ -0.94
COMMD3-215ENST00000602574 THOC5Q13769 683 aaKnown RBP9.15□□□□□ -0.94
COMMD3-215ENST00000602574 TMEM95Q3KNT9 176 aa9.15□□□□□ -0.94
COMMD3-215ENST00000602574 LRIT3Q3SXY7 679 aa9.15□□□□□ -0.94
COMMD3-215ENST00000602574 SFT2D3Q587I9 215 aa9.15□□□□□ -0.94
COMMD3-215ENST00000602574 METTL24Q5JXM2 366 aa9.15□□□□□ -0.94
COMMD3-215ENST00000602574 RTP2Q5QGT7 225 aa9.15□□□□□ -0.94
COMMD3-215ENST00000602574 PPM1LQ5SGD2 360 aa9.15□□□□□ -0.94
COMMD3-215ENST00000602574 SYCE2Q6PIF2 218 aa9.15□□□□□ -0.94
COMMD3-215ENST00000602574 ILDR1Q86SU0 546 aaPredicted RBP9.15□□□□□ -0.94
COMMD3-215ENST00000602574 METTL16Q86W50 562 aaKnown RBP9.15□□□□□ -0.94
COMMD3-215ENST00000602574 GPBP1Q86WP2 473 aa9.15□□□□□ -0.94
COMMD3-215ENST00000602574 ADGRF2Q8IZF7 708 aa9.15□□□□□ -0.94
COMMD3-215ENST00000602574 CERKQ8TCT0 537 aa9.15□□□□□ -0.94
COMMD3-215ENST00000602574 FNIP1Q8TF40 1166 aa9.15□□□□□ -0.94
COMMD3-215ENST00000602574 XAGE3Q8WTP9 111 aa9.15□□□□□ -0.94
COMMD3-215ENST00000602574 KCTD4Q8WVF5 259 aa9.15□□□□□ -0.94
COMMD3-215ENST00000602574 PTCD3Q96EY7 689 aaKnown RBP9.15□□□□□ -0.94
COMMD3-215ENST00000602574 PAGE5Q96GU1 130 aa9.15□□□□□ -0.94
COMMD3-215ENST00000602574 EXOC2Q96KP1 924 aa9.15□□□□□ -0.94
COMMD3-215ENST00000602574 HEXIM2Q96MH2 286 aaKnown RBP9.15□□□□□ -0.94
COMMD3-215ENST00000602574 CHP1Q99653 195 aa9.15□□□□□ -0.94
COMMD3-215ENST00000602574 ZKSCAN3Q9BRR0 538 aa9.15□□□□□ -0.94
COMMD3-215ENST00000602574 ZSCAN5AQ9BUG6 496 aa9.15□□□□□ -0.94
COMMD3-215ENST00000602574 LACRTQ9GZZ8 138 aa9.15□□□□□ -0.94
COMMD3-215ENST00000602574 TUFT1Q9NNX1 390 aa9.15□□□□□ -0.94
COMMD3-215ENST00000602574 TAS2R1Q9NYW7 299 aa9.15□□□□□ -0.94
COMMD3-215ENST00000602574 EXTL2Q9UBQ6 330 aa9.15□□□□□ -0.94
COMMD3-215ENST00000602574 SERPINA10Q9UK55 444 aa9.15□□□□□ -0.94
COMMD3-215ENST00000602574 USTQ9Y2C2 406 aa9.15□□□□□ -0.94
COMMD3-215ENST00000602574 SIK3Q9Y2K2 1263 aa9.15□□□□□ -0.94
COMMD3-215ENST00000602574 HCN4Q9Y3Q4 1203 aa9.15□□□□□ -0.94
COMMD3-215ENST00000602574 PCDHA5Q9Y5H7 936 aa9.15□□□□□ -0.94
COMMD3-215ENST00000602574 ZHX2Q9Y6X8 837 aa9.15□□□□□ -0.94
COMMD3-215ENST00000602574 EMSYQ7Z589 1322 aa9.15□□□□□ -0.94
COMMD3-215ENST00000602574 SLC9B1P1A6NJY1 282 aa9.15□□□□□ -0.95
COMMD3-215ENST00000602574 PLOD2O00469 737 aa9.15□□□□□ -0.95
COMMD3-215ENST00000602574 SH2B2O14492 632 aaPredicted RBP9.15□□□□□ -0.95
COMMD3-215ENST00000602574 C2CD2LO14523 706 aa9.15□□□□□ -0.95
COMMD3-215ENST00000602574 PLA2G6O60733 806 aa9.15□□□□□ -0.95
COMMD3-215ENST00000602574 NIPSNAP2O75323 286 aa9.15□□□□□ -0.95
COMMD3-215ENST00000602574 SERPINI2O75830 405 aa9.15□□□□□ -0.95
COMMD3-215ENST00000602574 CIB2O75838 187 aa9.15□□□□□ -0.95
COMMD3-215ENST00000602574 OR7A10O76100 309 aa9.15□□□□□ -0.95
COMMD3-215ENST00000602574 VNN1O95497 513 aa9.15□□□□□ -0.95
COMMD3-215ENST00000602574 NTRK1P04629 796 aa9.15□□□□□ -0.95
COMMD3-215ENST00000602574 PRKAR2AP13861 404 aaKnown RBP9.15□□□□□ -0.95
COMMD3-215ENST00000602574 FDFT1P37268 417 aa9.15□□□□□ -0.95
COMMD3-215ENST00000602574 NPEPPSP55786 919 aa9.15□□□□□ -0.95
COMMD3-215ENST00000602574 OTUD4Q01804 1114 aaKnown RBP9.15□□□□□ -0.95
COMMD3-215ENST00000602574 GTDC1Q4AE62 458 aa9.15□□□□□ -0.95
COMMD3-215ENST00000602574 CEP55Q53EZ4 464 aa9.15□□□□□ -0.95
COMMD3-215ENST00000602574 ESCO2Q56NI9 601 aa9.15□□□□□ -0.95
COMMD3-215ENST00000602574 PDE12Q6L8Q7 609 aaKnown RBP9.15□□□□□ -0.95
COMMD3-215ENST00000602574 NFRKBQ6P4R8 1299 aa9.15□□□□□ -0.95
COMMD3-215ENST00000602574 KYAT3Q6YP21 454 aaKnown RBP9.15□□□□□ -0.95
COMMD3-215ENST00000602574 USP31Q70CQ4 1352 aa9.15□□□□□ -0.95
COMMD3-215ENST00000602574 RIMS1Q86UR5 1692 aaKnown RBP9.15□□□□□ -0.95
COMMD3-215ENST00000602574 RIOX2Q8IUF8 465 aa9.15□□□□□ -0.95
COMMD3-215ENST00000602574 ICA1LQ8NDH6 482 aa9.15□□□□□ -0.95
COMMD3-215ENST00000602574 NKD2Q969F2 451 aaPredicted RBP9.15□□□□□ -0.95
COMMD3-215ENST00000602574 RAD51AP1Q96B01 352 aa9.15□□□□□ -0.95
COMMD3-215ENST00000602574 PDXPQ96GD0 296 aa9.15□□□□□ -0.95
COMMD3-215ENST00000602574 CNDP1Q96KN2 507 aa9.15□□□□□ -0.95
COMMD3-215ENST00000602574 HINFPQ9BQA5 517 aa9.15□□□□□ -0.95
COMMD3-215ENST00000602574 IL1RAPL2Q9NP60 686 aa9.15□□□□□ -0.95
COMMD3-215ENST00000602574 SALL1Q9NSC2 1324 aa9.15□□□□□ -0.95
COMMD3-215ENST00000602574 TMEM9Q9P0T7 183 aa9.15□□□□□ -0.95
COMMD3-215ENST00000602574 ZNFX1Q9P2E3 1918 aaKnown RBP9.15□□□□□ -0.95
COMMD3-215ENST00000602574 CAPN11Q9UMQ6 739 aa9.15□□□□□ -0.95
COMMD3-215ENST00000602574 CLEC4AQ9UMR7 237 aa9.15□□□□□ -0.95
COMMD3-215ENST00000602574 GINS2Q9Y248 185 aa9.15□□□□□ -0.95
COMMD3-215ENST00000602574 NCAPD2Q15021 1401 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 MINK1Q8N4C8 1332 aaPredicted RBP9.14□□□□□ -0.95
COMMD3-215ENST00000602574 ARHGEF37A1IGU5 675 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 DBX1A6NMT0 343 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 CCDC188H7C350 402 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 ASNA1O43681 348 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 PIGNO95427 931 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 SLC4A1P02730 911 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 FAM58BPP0C7Q3 252 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 TGM1P22735 817 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 CCNE1P24864 410 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 GRK2P25098 689 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 RPA1P27694 616 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 CDC27P30260 824 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 IL6STP40189 918 aaPredicted RBP9.14□□□□□ -0.95
COMMD3-215ENST00000602574 GARSP41250 739 aaKnown RBP9.14□□□□□ -0.95
COMMD3-215ENST00000602574 NPTX2P47972 431 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 KCNMA1Q12791 1236 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 STRN3Q13033 797 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 DHX34Q14147 1143 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms