RNA–Protein interactions for RNA: ENST00000602173.5

RAB4B-208, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB4B, Length 592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-208ENST00000602173 COBLL1Q53SF7 1204 aa13.16□□□□□ -0.3
RAB4B-208ENST00000602173 ZNF658Q5TYW1 1059 aaPredicted RBP13.16□□□□□ -0.3
RAB4B-208ENST00000602173 Q6ZNB5 142 aa13.16□□□□□ -0.3
RAB4B-208ENST00000602173 CLEC17AQ6ZS10 378 aa13.16□□□□□ -0.3
RAB4B-208ENST00000602173 ZC3H3Q8IXZ2 948 aaKnown RBP13.16□□□□□ -0.3
RAB4B-208ENST00000602173 TTC39CQ8N584 583 aa13.16□□□□□ -0.3
RAB4B-208ENST00000602173 FRMD1Q8N878 549 aa13.16□□□□□ -0.3
RAB4B-208ENST00000602173 SLC4A11Q8NBS3 891 aa13.16□□□□□ -0.3
RAB4B-208ENST00000602173 ENGASEQ8NFI3 743 aa13.16□□□□□ -0.3
RAB4B-208ENST00000602173 RLN3Q8WXF3 142 aa13.16□□□□□ -0.3
RAB4B-208ENST00000602173 HEXIM2Q96MH2 286 aaKnown RBP13.16□□□□□ -0.3
RAB4B-208ENST00000602173 GSDMAQ96QA5 445 aa13.16□□□□□ -0.3
RAB4B-208ENST00000602173 ARID3AQ99856 593 aa13.16□□□□□ -0.3
RAB4B-208ENST00000602173 DNAI2Q9GZS0 605 aa13.16□□□□□ -0.3
RAB4B-208ENST00000602173 CISHQ9NSE2 258 aa13.16□□□□□ -0.3
RAB4B-208ENST00000602173 RMND1Q9NWS8 449 aa13.16□□□□□ -0.3
RAB4B-208ENST00000602173 MARK1Q9P0L2 795 aa13.16□□□□□ -0.3
RAB4B-208ENST00000602173 NAGPAQ9UK23 515 aa13.16□□□□□ -0.3
RAB4B-208ENST00000602173 LSM7Q9UK45 103 aaKnown RBP13.16□□□□□ -0.3
RAB4B-208ENST00000602173 COQ4Q9Y3A0 265 aa13.16□□□□□ -0.3
RAB4B-208ENST00000602173 STARD13Q9Y3M8 1113 aa13.16□□□□□ -0.3
RAB4B-208ENST00000602173 CKAP5Q14008 2032 aa13.16□□□□□ -0.3
RAB4B-208ENST00000602173 CACNA1EQ15878 2313 aa13.15□□□□□ -0.3
RAB4B-208ENST00000602173 STX10O60499 249 aa13.15□□□□□ -0.3
RAB4B-208ENST00000602173 STC2O76061 302 aa13.15□□□□□ -0.3
RAB4B-208ENST00000602173 TYRP14679 529 aa13.15□□□□□ -0.3
RAB4B-208ENST00000602173 PMS1P54277 932 aaKnown RBP13.15□□□□□ -0.3
RAB4B-208ENST00000602173 MAP7D1Q3KQU3 841 aa13.15□□□□□ -0.3
RAB4B-208ENST00000602173 CBWD6Q4V339 395 aa13.15□□□□□ -0.3
RAB4B-208ENST00000602173 CBWD3Q5JTY5 395 aa13.15□□□□□ -0.3
RAB4B-208ENST00000602173 CBWD5Q5RIA9 395 aa13.15□□□□□ -0.3
RAB4B-208ENST00000602173 C10orf120Q5SQS8 335 aa13.15□□□□□ -0.3
RAB4B-208ENST00000602173 C10orf76Q5T2E6 689 aa13.15□□□□□ -0.3
RAB4B-208ENST00000602173 RNF43Q68DV7 783 aa13.15□□□□□ -0.3
RAB4B-208ENST00000602173 GRAMD4Q6IC98 578 aa13.15□□□□□ -0.3
RAB4B-208ENST00000602173 TPGS1Q6ZTW0 290 aa13.15□□□□□ -0.3
RAB4B-208ENST00000602173 NUDT18Q6ZVK8 323 aa13.15□□□□□ -0.3
RAB4B-208ENST00000602173 MIB1Q86YT6 1006 aa13.15□□□□□ -0.3
RAB4B-208ENST00000602173 ZNF513Q8N8E2 541 aaPredicted RBP13.15□□□□□ -0.3
RAB4B-208ENST00000602173 SPATA20Q8TB22 786 aa13.15□□□□□ -0.3
RAB4B-208ENST00000602173 TMEM176AQ96HP8 235 aa13.15□□□□□ -0.3
RAB4B-208ENST00000602173 CNTNAP3BQ96NU0 1288 aa13.15□□□□□ -0.3
RAB4B-208ENST00000602173 XPO6Q96QU8 1125 aaKnown RBP13.15□□□□□ -0.3
RAB4B-208ENST00000602173 LSM14BQ9BX40 385 aaKnown RBP13.15□□□□□ -0.3
RAB4B-208ENST00000602173 BBS2Q9BXC9 721 aa13.15□□□□□ -0.3
RAB4B-208ENST00000602173 CNTNAP3Q9BZ76 1288 aa13.15□□□□□ -0.3
RAB4B-208ENST00000602173 UBXN6Q9BZV1 441 aa13.15□□□□□ -0.3
RAB4B-208ENST00000602173 FAM124BQ9H5Z6 455 aaPredicted RBP13.15□□□□□ -0.3
RAB4B-208ENST00000602173 DNAJC17Q9NVM6 304 aaKnown RBP13.15□□□□□ -0.3
RAB4B-208ENST00000602173 CLIC5Q9NZA1 410 aa13.15□□□□□ -0.3
RAB4B-208ENST00000602173 WDR35Q9P2L0 1181 aa13.15□□□□□ -0.3
RAB4B-208ENST00000602173 MBD1Q9UIS9 605 aaPredicted RBP13.15□□□□□ -0.3
RAB4B-208ENST00000602173 TCRBV21S2A2A0A5A6 115 aa13.14□□□□□ -0.31
RAB4B-208ENST00000602173 LNP1A1A4G5 178 aa13.14□□□□□ -0.31
RAB4B-208ENST00000602173 PRRT4C9JH25 899 aa13.14□□□□□ -0.31
RAB4B-208ENST00000602173 NEDD8-MDP1E9PL57 170 aa13.14□□□□□ -0.31
RAB4B-208ENST00000602173 KLKB1P03952 638 aa13.14□□□□□ -0.31
RAB4B-208ENST00000602173 RALAP11233 206 aa13.14□□□□□ -0.31
RAB4B-208ENST00000602173 NTSR1P30989 418 aa13.14□□□□□ -0.31
RAB4B-208ENST00000602173 DHPSP49366 369 aaPredicted RBP13.14□□□□□ -0.31
RAB4B-208ENST00000602173 FKBP3Q00688 224 aaKnown RBP13.14□□□□□ -0.31
RAB4B-208ENST00000602173 RAB41Q5JT25 222 aa13.14□□□□□ -0.31
RAB4B-208ENST00000602173 ARHGAP17Q68EM7 881 aa13.14□□□□□ -0.31
RAB4B-208ENST00000602173 ANKRD40Q6AI12 368 aa13.14□□□□□ -0.31
RAB4B-208ENST00000602173 TOGARAM2Q6ZUX3 1019 aa13.14□□□□□ -0.31
RAB4B-208ENST00000602173 CYP2U1Q7Z449 544 aa13.14□□□□□ -0.31
RAB4B-208ENST00000602173 TRMT11Q7Z4G4 463 aaKnown RBP13.14□□□□□ -0.31
RAB4B-208ENST00000602173 TADA2BQ86TJ2 420 aa13.14□□□□□ -0.31
RAB4B-208ENST00000602173 PIGZQ86VD9 579 aa13.14□□□□□ -0.31
RAB4B-208ENST00000602173 HMGB4Q8WW32 186 aa13.14□□□□□ -0.31
RAB4B-208ENST00000602173 P2RY11Q96G91 374 aa13.14□□□□□ -0.31
RAB4B-208ENST00000602173 ACOX2Q99424 681 aa13.14□□□□□ -0.31
RAB4B-208ENST00000602173 EDEM2Q9BV94 578 aa13.14□□□□□ -0.31
RAB4B-208ENST00000602173 BCCIPQ9P287 314 aaKnown RBP eCLIP13.14□□□□□ -0.31
RAB4B-208ENST00000602173 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.13□□□□□ -0.31
RAB4B-208ENST00000602173 A0A1W2PQF6 199 aa13.13□□□□□ -0.31
RAB4B-208ENST00000602173 PATE3B3GLJ2 98 aa13.13□□□□□ -0.31
RAB4B-208ENST00000602173 KHNYNO15037 678 aaKnown RBP13.13□□□□□ -0.31
RAB4B-208ENST00000602173 SLC16A3O15427 465 aaKnown RBP13.13□□□□□ -0.31
RAB4B-208ENST00000602173 CISD3P0C7P0 127 aa13.13□□□□□ -0.31
RAB4B-208ENST00000602173 HOXB2P14652 356 aa13.13□□□□□ -0.31
RAB4B-208ENST00000602173 GABRG2P18507 467 aa13.13□□□□□ -0.31
RAB4B-208ENST00000602173 WASP42768 502 aa13.13□□□□□ -0.31
RAB4B-208ENST00000602173 IRX4P78413 519 aa13.13□□□□□ -0.31
RAB4B-208ENST00000602173 COG7P83436 770 aa13.13□□□□□ -0.31
RAB4B-208ENST00000602173 BYSLQ13895 437 aaKnown RBP13.13□□□□□ -0.31
RAB4B-208ENST00000602173 TCERG1LQ5VWI1 586 aa13.13□□□□□ -0.31
RAB4B-208ENST00000602173 EGFLAMQ63HQ2 1017 aa13.13□□□□□ -0.31
RAB4B-208ENST00000602173 LPCAT2Q7L5N7 544 aa13.13□□□□□ -0.31
RAB4B-208ENST00000602173 TMEFF1Q8IYR6 380 aa13.13□□□□□ -0.31
RAB4B-208ENST00000602173 PGBD3Q8N328 593 aa13.13□□□□□ -0.31
RAB4B-208ENST00000602173 ANKRD52Q8NB46 1076 aa13.13□□□□□ -0.31
RAB4B-208ENST00000602173 PIGKQ92643 395 aa13.13□□□□□ -0.31
RAB4B-208ENST00000602173 ERCC4Q92889 916 aaPredicted RBP13.13□□□□□ -0.31
RAB4B-208ENST00000602173 SPACA7Q96KW9 195 aa13.13□□□□□ -0.31
RAB4B-208ENST00000602173 TIGD1Q96MW7 591 aa13.13□□□□□ -0.31
RAB4B-208ENST00000602173 TSG101Q99816 390 aa13.13□□□□□ -0.31
RAB4B-208ENST00000602173 CD248Q9HCU0 757 aa13.13□□□□□ -0.31
RAB4B-208ENST00000602173 PLK2Q9NYY3 685 aa13.13□□□□□ -0.31
RAB4B-208ENST00000602173 FBXO10Q9UK96 956 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms