RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 DEUP1Q05D60 604 aa14.28□□□□□ -0.12
IRF3-229ENST00000601373 TFDP2Q14188 446 aa14.28□□□□□ -0.12
IRF3-229ENST00000601373 KRT81Q14533 505 aa14.28□□□□□ -0.12
IRF3-229ENST00000601373 SMTNL2Q2TAL5 461 aa14.28□□□□□ -0.12
IRF3-229ENST00000601373 KCNT1Q5JUK3 1230 aa14.28□□□□□ -0.12
IRF3-229ENST00000601373 BSPRYQ5W0U4 402 aa14.28□□□□□ -0.12
IRF3-229ENST00000601373 BTBD8Q5XKL5 378 aa14.28□□□□□ -0.12
IRF3-229ENST00000601373 TPGS2Q68CL5 300 aa14.28□□□□□ -0.12
IRF3-229ENST00000601373 PRSS55Q6UWB4 352 aaPredicted RBP14.28□□□□□ -0.12
IRF3-229ENST00000601373 RSPO2Q6UXX9 243 aaPredicted RBP14.28□□□□□ -0.12
IRF3-229ENST00000601373 HFE2Q6ZVN8 426 aa14.28□□□□□ -0.12
IRF3-229ENST00000601373 CYP4V2Q6ZWL3 525 aaPredicted RBP14.28□□□□□ -0.12
IRF3-229ENST00000601373 BHLHA9Q7RTU4 235 aa14.28□□□□□ -0.12
IRF3-229ENST00000601373 TMCO2Q7Z6W1 182 aaPredicted RBP14.28□□□□□ -0.12
IRF3-229ENST00000601373 MON1AQ86VX9 555 aa14.28□□□□□ -0.12
IRF3-229ENST00000601373 ZDHHC14Q8IZN3 488 aa14.28□□□□□ -0.12
IRF3-229ENST00000601373 ATAD1Q8NBU5 361 aa14.28□□□□□ -0.12
IRF3-229ENST00000601373 FAM71BQ8TC56 605 aa14.28□□□□□ -0.12
IRF3-229ENST00000601373 GRK7Q8WTQ7 553 aa14.28□□□□□ -0.12
IRF3-229ENST00000601373 HNRNPLLQ8WVV9 542 aaKnown RBP14.28□□□□□ -0.12
IRF3-229ENST00000601373 HSPH1Q92598 858 aa14.28□□□□□ -0.12
IRF3-229ENST00000601373 PGLYRP2Q96PD5 576 aa14.28□□□□□ -0.12
IRF3-229ENST00000601373 PNKPQ96T60 521 aa14.28□□□□□ -0.12
IRF3-229ENST00000601373 VN1R3Q9BXE9 311 aa14.28□□□□□ -0.12
IRF3-229ENST00000601373 HEMGNQ9BXL5 484 aa14.28□□□□□ -0.12
IRF3-229ENST00000601373 MAK16Q9BXY0 300 aaKnown RBP14.28□□□□□ -0.12
IRF3-229ENST00000601373 DCLK3Q9C098 648 aa14.28□□□□□ -0.12
IRF3-229ENST00000601373 RAB17Q9H0T7 212 aa14.28□□□□□ -0.12
IRF3-229ENST00000601373 PRDM16Q9HAZ2 1276 aa14.28□□□□□ -0.12
IRF3-229ENST00000601373 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.28□□□□□ -0.12
IRF3-229ENST00000601373 KLHL11Q9NVR0 708 aa14.28□□□□□ -0.12
IRF3-229ENST00000601373 IL37Q9NZH6 218 aa14.28□□□□□ -0.12
IRF3-229ENST00000601373 AFF4Q9UHB7 1163 aaKnown RBP14.28□□□□□ -0.12
IRF3-229ENST00000601373 RASAL2Q9UJF2 1139 aa14.28□□□□□ -0.12
IRF3-229ENST00000601373 MAFFQ9ULX9 164 aa14.28□□□□□ -0.12
IRF3-229ENST00000601373 NAALADL1Q9UQQ1 740 aa14.28□□□□□ -0.12
IRF3-229ENST00000601373 CDY1Q9Y6F8 540 aa14.28□□□□□ -0.12
IRF3-229ENST00000601373 SLC4A7Q9Y6M7 1214 aa14.28□□□□□ -0.12
IRF3-229ENST00000601373 EYSQ5T1H1 3165 aa14.27□□□□□ -0.12
IRF3-229ENST00000601373 TNFRSF10AO00220 468 aa14.27□□□□□ -0.13
IRF3-229ENST00000601373 URODP06132 367 aa14.27□□□□□ -0.13
IRF3-229ENST00000601373 OR1D2P34982 312 aa14.27□□□□□ -0.13
IRF3-229ENST00000601373 CDH6P55285 790 aa14.27□□□□□ -0.13
IRF3-229ENST00000601373 YWHAGP61981 247 aaKnown RBP eCLIP14.27□□□□□ -0.13
IRF3-229ENST00000601373 DR1Q01658 176 aa14.27□□□□□ -0.13
IRF3-229ENST00000601373 ROR1Q01973 937 aa14.27□□□□□ -0.13
IRF3-229ENST00000601373 LMNB2Q03252 620 aa14.27□□□□□ -0.13
IRF3-229ENST00000601373 DDR2Q16832 855 aa14.27□□□□□ -0.13
IRF3-229ENST00000601373 MGAT5BQ3V5L5 792 aa14.27□□□□□ -0.13
IRF3-229ENST00000601373 MAP9Q49MG5 647 aa14.27□□□□□ -0.13
IRF3-229ENST00000601373 SYPL2Q5VXT5 272 aa14.27□□□□□ -0.13
IRF3-229ENST00000601373 KAZNQ674X7 775 aa14.27□□□□□ -0.13
IRF3-229ENST00000601373 DRICH1Q6PGQ1 229 aaPredicted RBP14.27□□□□□ -0.13
IRF3-229ENST00000601373 CCDC137Q6PK04 289 aaKnown RBP14.27□□□□□ -0.13
IRF3-229ENST00000601373 TMCO3Q6UWJ1 677 aa14.27□□□□□ -0.13
IRF3-229ENST00000601373 CCNI2Q6ZMN8 369 aaPredicted RBP14.27□□□□□ -0.13
IRF3-229ENST00000601373 RNF19BQ6ZMZ0 732 aa14.27□□□□□ -0.13
IRF3-229ENST00000601373 SYDE1Q6ZW31 735 aaPredicted RBP14.27□□□□□ -0.13
IRF3-229ENST00000601373 BBS12Q6ZW61 710 aa14.27□□□□□ -0.13
IRF3-229ENST00000601373 SND1Q7KZF4 910 aaKnown RBP eCLIP14.27□□□□□ -0.13
IRF3-229ENST00000601373 EIF1ADQ8N9N8 165 aaKnown RBP14.27□□□□□ -0.13
IRF3-229ENST00000601373 SCAMP5Q8TAC9 235 aa14.27□□□□□ -0.13
IRF3-229ENST00000601373 SLCO2A1Q92959 643 aa14.27□□□□□ -0.13
IRF3-229ENST00000601373 RAD9AQ99638 391 aa14.27□□□□□ -0.13
IRF3-229ENST00000601373 SNRNP25Q9BV90 132 aaKnown RBP14.27□□□□□ -0.13
IRF3-229ENST00000601373 GDF3Q9NR23 364 aa14.27□□□□□ -0.13
IRF3-229ENST00000601373 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.27□□□□□ -0.13
IRF3-229ENST00000601373 AMACRQ9UHK6 382 aa14.27□□□□□ -0.13
IRF3-229ENST00000601373 DMGDHQ9UI17 866 aaKnown RBP14.27□□□□□ -0.13
IRF3-229ENST00000601373 UTP11Q9Y3A2 253 aaKnown RBP14.27□□□□□ -0.13
IRF3-229ENST00000601373 CDH23Q9H251 3354 aa14.27□□□□□ -0.13
IRF3-229ENST00000601373 PATJQ8NI35 1801 aa14.27□□□□□ -0.13
IRF3-229ENST00000601373 FAM92AA1XBS5 289 aa14.26□□□□□ -0.13
IRF3-229ENST00000601373 WDR27A2RRH5 827 aa14.26□□□□□ -0.13
IRF3-229ENST00000601373 ABLIM3O94929 683 aa14.26□□□□□ -0.13
IRF3-229ENST00000601373 KRT10P13645 584 aa14.26□□□□□ -0.13
IRF3-229ENST00000601373 TFE3P19532 575 aaPredicted RBP14.26□□□□□ -0.13
IRF3-229ENST00000601373 YWHAQP27348 245 aa14.26□□□□□ -0.13
IRF3-229ENST00000601373 PSEN1P49768 467 aa14.26□□□□□ -0.13
IRF3-229ENST00000601373 VSNL1P62760 191 aa14.26□□□□□ -0.13
IRF3-229ENST00000601373 SLC7A5Q01650 507 aa14.26□□□□□ -0.13
IRF3-229ENST00000601373 DUSP4Q13115 394 aa14.26□□□□□ -0.13
IRF3-229ENST00000601373 RAB33AQ14088 237 aa14.26□□□□□ -0.13
IRF3-229ENST00000601373 DPYSL2Q16555 572 aa14.26□□□□□ -0.13
IRF3-229ENST00000601373 ARL13BQ3SXY8 428 aa14.26□□□□□ -0.13
IRF3-229ENST00000601373 FBXO38Q6PIJ6 1188 aa14.26□□□□□ -0.13
IRF3-229ENST00000601373 DENND5BQ6ZUT9 1274 aa14.26□□□□□ -0.13
IRF3-229ENST00000601373 HERC6Q8IVU3 1022 aa14.26□□□□□ -0.13
IRF3-229ENST00000601373 CCDC105Q8IYK2 499 aa14.26□□□□□ -0.13
IRF3-229ENST00000601373 ATL2Q8NHH9 583 aa14.26□□□□□ -0.13
IRF3-229ENST00000601373 ZNF461Q8TAF7 563 aa14.26□□□□□ -0.13
IRF3-229ENST00000601373 SLC7A14Q8TBB6 771 aa14.26□□□□□ -0.13
IRF3-229ENST00000601373 SP7Q8TDD2 431 aaPredicted RBP14.26□□□□□ -0.13
IRF3-229ENST00000601373 HDAC7Q8WUI4 952 aa14.26□□□□□ -0.13
IRF3-229ENST00000601373 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.26□□□□□ -0.137e-8■■■■■ 60.2
IRF3-229ENST00000601373 CLP1Q92989 425 aaKnown RBP14.26□□□□□ -0.13
IRF3-229ENST00000601373 NTAN1Q96AB6 310 aa14.26□□□□□ -0.13
IRF3-229ENST00000601373 ACSF2Q96CM8 615 aaPredicted RBP14.26□□□□□ -0.13
IRF3-229ENST00000601373 SEPT5Q99719 369 aaPredicted RBP14.26□□□□□ -0.13
IRF3-229ENST00000601373 CLSTN3Q9BQT9 956 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms