RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 C10orf120Q5SQS8 335 aa17.89■□□□□ 0.45
SCAF1-204ENST00000601038 TPGS1Q6ZTW0 290 aa17.89■□□□□ 0.45
SCAF1-204ENST00000601038 PGBD3Q8N328 593 aa17.89■□□□□ 0.45
SCAF1-204ENST00000601038 FRMD1Q8N878 549 aa17.89■□□□□ 0.45
SCAF1-204ENST00000601038 FBXL13Q8NEE6 735 aa17.89■□□□□ 0.45
SCAF1-204ENST00000601038 PIGKQ92643 395 aa17.89■□□□□ 0.45
SCAF1-204ENST00000601038 SEMA4DQ92854 862 aa17.89■□□□□ 0.45
SCAF1-204ENST00000601038 HEXIM2Q96MH2 286 aaKnown RBP17.89■□□□□ 0.45
SCAF1-204ENST00000601038 CLIC5Q9NZA1 410 aa17.89■□□□□ 0.45
SCAF1-204ENST00000601038 NAGPAQ9UK23 515 aa17.89■□□□□ 0.45
SCAF1-204ENST00000601038 NUDT5Q9UKK9 219 aa17.89■□□□□ 0.45
SCAF1-204ENST00000601038 CIZ1Q9ULV3 898 aaPredicted RBP17.89■□□□□ 0.45
SCAF1-204ENST00000601038 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.88■□□□□ 0.45
SCAF1-204ENST00000601038 MDM4O15151 490 aa17.88■□□□□ 0.45
SCAF1-204ENST00000601038 CETN3O15182 167 aa17.88■□□□□ 0.45
SCAF1-204ENST00000601038 STX10O60499 249 aa17.88■□□□□ 0.45
SCAF1-204ENST00000601038 RALAP11233 206 aa17.88■□□□□ 0.45
SCAF1-204ENST00000601038 PMLP29590 882 aa17.88■□□□□ 0.45
SCAF1-204ENST00000601038 NTSR1P30989 418 aa17.88■□□□□ 0.45
SCAF1-204ENST00000601038 IRX4P78413 519 aa17.88■□□□□ 0.45
SCAF1-204ENST00000601038 ZNF394Q53GI3 561 aa17.88■□□□□ 0.45
SCAF1-204ENST00000601038 DAB2IPQ5VWQ8 1189 aa17.88■□□□□ 0.45
SCAF1-204ENST00000601038 Q6ZNB5 142 aa17.88■□□□□ 0.45
SCAF1-204ENST00000601038 SCD5Q86SK9 330 aa17.88■□□□□ 0.45
SCAF1-204ENST00000601038 TMEFF1Q8IYR6 380 aa17.88■□□□□ 0.45
SCAF1-204ENST00000601038 EEF2KMTQ96G04 330 aa17.88■□□□□ 0.45
SCAF1-204ENST00000601038 CDK5RAP1Q96SZ6 601 aaKnown RBP17.88■□□□□ 0.45
SCAF1-204ENST00000601038 UBXN6Q9BZV1 441 aa17.88■□□□□ 0.45
SCAF1-204ENST00000601038 FAM124BQ9H5Z6 455 aaPredicted RBP17.88■□□□□ 0.45
SCAF1-204ENST00000601038 RAB20Q9NX57 234 aa17.88■□□□□ 0.45
SCAF1-204ENST00000601038 MBD1Q9UIS9 605 aaPredicted RBP17.88■□□□□ 0.45
SCAF1-204ENST00000601038 PATE3B3GLJ2 98 aa17.87■□□□□ 0.45
SCAF1-204ENST00000601038 STC2O76061 302 aa17.87■□□□□ 0.45
SCAF1-204ENST00000601038 EPB41P11171 864 aaKnown RBP17.87■□□□□ 0.45
SCAF1-204ENST00000601038 HOXB2P14652 356 aa17.87■□□□□ 0.45
SCAF1-204ENST00000601038 GABRG2P18507 467 aa17.87■□□□□ 0.45
SCAF1-204ENST00000601038 MXI1P50539 228 aa17.87■□□□□ 0.45
SCAF1-204ENST00000601038 SDE2Q6IQ49 451 aa17.87■□□□□ 0.45
SCAF1-204ENST00000601038 MIB1Q86YT6 1006 aa17.87■□□□□ 0.45
SCAF1-204ENST00000601038 SMYD4Q8IYR2 804 aaPredicted RBP17.87■□□□□ 0.45
SCAF1-204ENST00000601038 SLC4A11Q8NBS3 891 aa17.87■□□□□ 0.45
SCAF1-204ENST00000601038 TMEM176AQ96HP8 235 aa17.87■□□□□ 0.45
SCAF1-204ENST00000601038 GDPD2Q9HCC8 539 aa17.87■□□□□ 0.45
SCAF1-204ENST00000601038 TMEM9BQ9NQ34 198 aa17.87■□□□□ 0.45
SCAF1-204ENST00000601038 CISHQ9NSE2 258 aa17.87■□□□□ 0.45
SCAF1-204ENST00000601038 EVLQ9UI08 416 aaPredicted RBP17.87■□□□□ 0.45
SCAF1-204ENST00000601038 ANGPTL2Q9UKU9 493 aa17.87■□□□□ 0.45
SCAF1-204ENST00000601038 ZNF510Q9Y2H8 683 aa17.87■□□□□ 0.45
SCAF1-204ENST00000601038 GON4LQ3T8J9 2241 aa17.86■□□□□ 0.45
SCAF1-204ENST00000601038 ACACBO00763 2458 aa17.86■□□□□ 0.45
SCAF1-204ENST00000601038 A0A1W2PQF6 199 aa17.86■□□□□ 0.45
SCAF1-204ENST00000601038 PRRT4C9JH25 899 aa17.86■□□□□ 0.45
SCAF1-204ENST00000601038 CDX4O14627 284 aaPredicted RBP17.86■□□□□ 0.45
SCAF1-204ENST00000601038 ZBTB24O43167 697 aaPredicted RBP17.86■□□□□ 0.45
SCAF1-204ENST00000601038 CISD3P0C7P0 127 aa17.86■□□□□ 0.45
SCAF1-204ENST00000601038 DPP6P42658 865 aa17.86■□□□□ 0.45
SCAF1-204ENST00000601038 PRCPP42785 496 aa17.86■□□□□ 0.45
SCAF1-204ENST00000601038 PTGER3P43115 390 aa17.86■□□□□ 0.45
SCAF1-204ENST00000601038 DGKGP49619 791 aa17.86■□□□□ 0.45
SCAF1-204ENST00000601038 RAD23BP54727 409 aa17.86■□□□□ 0.45
SCAF1-204ENST00000601038 COG7P83436 770 aa17.86■□□□□ 0.45
SCAF1-204ENST00000601038 SHC2P98077 582 aa17.86■□□□□ 0.45
SCAF1-204ENST00000601038 EGFLAMQ63HQ2 1017 aa17.86■□□□□ 0.45
SCAF1-204ENST00000601038 SYT12Q8IV01 421 aa17.86■□□□□ 0.45
SCAF1-204ENST00000601038 CHPFQ8IZ52 775 aa17.86■□□□□ 0.45
SCAF1-204ENST00000601038 TATDN2Q93075 761 aa17.86■□□□□ 0.45
SCAF1-204ENST00000601038 ACOX2Q99424 681 aa17.86■□□□□ 0.45
SCAF1-204ENST00000601038 RMND1Q9NWS8 449 aa17.86■□□□□ 0.45
SCAF1-204ENST00000601038 FBXO10Q9UK96 956 aa17.86■□□□□ 0.45
SCAF1-204ENST00000601038 PLXND1Q9Y4D7 1925 aa17.86■□□□□ 0.45
SCAF1-204ENST00000601038 AP5Z1O43299 807 aa17.85■□□□□ 0.45
SCAF1-204ENST00000601038 KLKB1P03952 638 aa17.85■□□□□ 0.45
SCAF1-204ENST00000601038 CHKAP35790 457 aa17.85■□□□□ 0.45
SCAF1-204ENST00000601038 WASP42768 502 aa17.85■□□□□ 0.45
SCAF1-204ENST00000601038 LMAN2Q12907 356 aa17.85■□□□□ 0.45
SCAF1-204ENST00000601038 PNOCQ13519 176 aa17.85■□□□□ 0.45
SCAF1-204ENST00000601038 COBLL1Q53SF7 1204 aa17.85■□□□□ 0.45
SCAF1-204ENST00000601038 TRIM61Q5EBN2 209 aa17.85■□□□□ 0.45
SCAF1-204ENST00000601038 RAB41Q5JT25 222 aa17.85■□□□□ 0.45
SCAF1-204ENST00000601038 ARHGAP17Q68EM7 881 aa17.85■□□□□ 0.45
SCAF1-204ENST00000601038 PSAPL1Q6NUJ1 521 aa17.85■□□□□ 0.45
SCAF1-204ENST00000601038 SLC36A4Q6YBV0 504 aa17.85■□□□□ 0.45
SCAF1-204ENST00000601038 TOGARAM2Q6ZUX3 1019 aa17.85■□□□□ 0.45
SCAF1-204ENST00000601038 ARHGAP18Q8N392 663 aa17.85■□□□□ 0.45
SCAF1-204ENST00000601038 ANKRD52Q8NB46 1076 aa17.85■□□□□ 0.45
SCAF1-204ENST00000601038 IPO4Q8TEX9 1081 aaKnown RBP17.85■□□□□ 0.45
SCAF1-204ENST00000601038 GSDMAQ96QA5 445 aa17.85■□□□□ 0.45
SCAF1-204ENST00000601038 ARID3AQ99856 593 aa17.85■□□□□ 0.45
SCAF1-204ENST00000601038 GABRG3Q99928 467 aa17.85■□□□□ 0.45
SCAF1-204ENST00000601038 CD248Q9HCU0 757 aa17.85■□□□□ 0.45
SCAF1-204ENST00000601038 TMEM74BQ9NUR3 256 aa17.85■□□□□ 0.45
SCAF1-204ENST00000601038 CALCOCO1Q9P1Z2 691 aa17.85■□□□□ 0.45
SCAF1-204ENST00000601038 GFRA2O00451 464 aa17.84■□□□□ 0.45
SCAF1-204ENST00000601038 HOXD12P35452 270 aa17.84■□□□□ 0.45
SCAF1-204ENST00000601038 NOVA1P51513 510 aaKnown RBP17.84■□□□□ 0.45
SCAF1-204ENST00000601038 SLC8A3P57103 927 aa17.84■□□□□ 0.45
SCAF1-204ENST00000601038 FKBP3Q00688 224 aaKnown RBP17.84■□□□□ 0.45
SCAF1-204ENST00000601038 ZNF658Q5TYW1 1059 aaPredicted RBP17.84■□□□□ 0.45
SCAF1-204ENST00000601038 LYSMD4Q5XG99 296 aa17.84■□□□□ 0.45
SCAF1-204ENST00000601038 ARMCX6Q7L4S7 300 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms