RNA–Protein interactions for RNA: ENST00000600868.5

UPF1-211, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-211ENST00000600868 OSGEPQ9NPF4 335 aa15□□□□□ -0.01
UPF1-211ENST00000600868 TRIM10Q9UDY6 481 aa15□□□□□ -0.01
UPF1-211ENST00000600868 IP6K2Q9UHH9 426 aa15□□□□□ -0.01
UPF1-211ENST00000600868 SALL4Q9UJQ4 1053 aa15□□□□□ -0.01
UPF1-211ENST00000600868 ANAPC7Q9UJX3 599 aa15□□□□□ -0.01
UPF1-211ENST00000600868 STAP1Q9ULZ2 295 aa15□□□□□ -0.01
UPF1-211ENST00000600868 ZKSCAN5Q9Y2L8 839 aa15□□□□□ -0.01
UPF1-211ENST00000600868 DOCK6Q96HP0 2047 aa15□□□□□ -0.01
UPF1-211ENST00000600868 ANAPC1Q9H1A4 1944 aa15□□□□□ -0.01
UPF1-211ENST00000600868 CLUHO75153 1309 aa14.99□□□□□ -0.01
UPF1-211ENST00000600868 GOLGA6L9A6NEM1 432 aa14.99□□□□□ -0.01
UPF1-211ENST00000600868 TLR5O60602 858 aa14.99□□□□□ -0.01
UPF1-211ENST00000600868 OAS1P00973 400 aaKnown RBP14.99□□□□□ -0.01
UPF1-211ENST00000600868 SDC4P31431 198 aa14.99□□□□□ -0.01
UPF1-211ENST00000600868 MTHFRP42898 656 aa14.99□□□□□ -0.01
UPF1-211ENST00000600868 OGDHQ02218 1023 aa14.99□□□□□ -0.01
UPF1-211ENST00000600868 PIGHQ14442 188 aaPredicted RBP14.99□□□□□ -0.01
UPF1-211ENST00000600868 ACAP1Q15027 740 aa14.99□□□□□ -0.01
UPF1-211ENST00000600868 IFI16Q16666 785 aaKnown RBP14.99□□□□□ -0.01
UPF1-211ENST00000600868 SLC25A52Q3SY17 297 aa14.99□□□□□ -0.01
UPF1-211ENST00000600868 ARHGAP15Q53QZ3 475 aa14.99□□□□□ -0.01
UPF1-211ENST00000600868 RSRC2Q7L4I2 434 aaKnown RBP14.99□□□□□ -0.01
UPF1-211ENST00000600868 NIPA2Q8N8Q9 360 aa14.99□□□□□ -0.01
UPF1-211ENST00000600868 SMRP1Q8NCR6 262 aa14.99□□□□□ -0.01
UPF1-211ENST00000600868 TPCN2Q8NHX9 752 aa14.99□□□□□ -0.01
UPF1-211ENST00000600868 RIPOR3Q96MK2 946 aa14.99□□□□□ -0.01
UPF1-211ENST00000600868 CNPY3Q9BT09 278 aa14.99□□□□□ -0.01
UPF1-211ENST00000600868 SMOC2Q9H3U7 446 aa14.99□□□□□ -0.01
UPF1-211ENST00000600868 CCSER2Q9H7U1 834 aa14.99□□□□□ -0.01
UPF1-211ENST00000600868 TMEM51Q9NW97 253 aa14.99□□□□□ -0.01
UPF1-211ENST00000600868 CD207Q9UJ71 328 aa14.99□□□□□ -0.01
UPF1-211ENST00000600868 MRPS23Q9Y3D9 190 aaKnown RBP14.99□□□□□ -0.01
UPF1-211ENST00000600868 REV3LO60673 3130 aa14.99□□□□□ -0.01
UPF1-211ENST00000600868 C2orf78A6NCI8 922 aa14.98□□□□□ -0.01
UPF1-211ENST00000600868 NRG2O14511 850 aaPredicted RBP14.98□□□□□ -0.01
UPF1-211ENST00000600868 COCHO43405 550 aa14.98□□□□□ -0.01
UPF1-211ENST00000600868 ENDOD1O94919 500 aa14.98□□□□□ -0.01
UPF1-211ENST00000600868 OLFM2O95897 454 aa14.98□□□□□ -0.01
UPF1-211ENST00000600868 GJA1P17302 382 aa14.98□□□□□ -0.01
UPF1-211ENST00000600868 DESP17661 470 aa14.98□□□□□ -0.01
UPF1-211ENST00000600868 FSHRP23945 695 aa14.98□□□□□ -0.01
UPF1-211ENST00000600868 PSMA2P25787 234 aa14.98□□□□□ -0.01
UPF1-211ENST00000600868 ATP5C1P36542 298 aaKnown RBP14.98□□□□□ -0.01
UPF1-211ENST00000600868 CYP4F8P98187 520 aa14.98□□□□□ -0.01
UPF1-211ENST00000600868 ZNF252P-AS1Q0IIN9 211 aa14.98□□□□□ -0.01
UPF1-211ENST00000600868 NNTQ13423 1086 aa14.98□□□□□ -0.01
UPF1-211ENST00000600868 TEAD2Q15562 447 aa14.98□□□□□ -0.01
UPF1-211ENST00000600868 CCDC14Q49A88 953 aa14.98□□□□□ -0.01
UPF1-211ENST00000600868 C10orf120Q5SQS8 335 aa14.98□□□□□ -0.01
UPF1-211ENST00000600868 TXNDC8Q6A555 127 aa14.98□□□□□ -0.01
UPF1-211ENST00000600868 BNIPLQ7Z465 357 aa14.98□□□□□ -0.01
UPF1-211ENST00000600868 DQX1Q8TE96 717 aaKnown RBP14.98□□□□□ -0.01
UPF1-211ENST00000600868 CENPIQ92674 756 aaPredicted RBP14.98□□□□□ -0.01
UPF1-211ENST00000600868 PGAP3Q96FM1 320 aaPredicted RBP14.98□□□□□ -0.01
UPF1-211ENST00000600868 CFAP57Q96MR6 1250 aa14.98□□□□□ -0.01
UPF1-211ENST00000600868 NECTIN4Q96NY8 510 aa14.98□□□□□ -0.01
UPF1-211ENST00000600868 TASP1Q9H6P5 420 aa14.98□□□□□ -0.01
UPF1-211ENST00000600868 UBE2ZQ9H832 354 aaPredicted RBP14.98□□□□□ -0.01
UPF1-211ENST00000600868 LZTFL1Q9NQ48 299 aa14.98□□□□□ -0.01
UPF1-211ENST00000600868 TRMT1Q9NXH9 659 aaKnown RBP14.98□□□□□ -0.01
UPF1-211ENST00000600868 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.98□□□□□ -0.01
UPF1-211ENST00000600868 MARCH2Q9P0N8 246 aa14.98□□□□□ -0.01
UPF1-211ENST00000600868 DNMT3LQ9UJW3 386 aa14.98□□□□□ -0.01
UPF1-211ENST00000600868 GUCA1BQ9UMX6 200 aa14.98□□□□□ -0.01
UPF1-211ENST00000600868 SZT2Q5T011 3432 aa14.98□□□□□ -0.01
UPF1-211ENST00000600868 TRAV19A0A0A6YYK7 116 aa14.97□□□□□ -0.01
UPF1-211ENST00000600868 MACROD2A1Z1Q3 448 aa14.97□□□□□ -0.01
UPF1-211ENST00000600868 USP27XA6NNY8 438 aa14.97□□□□□ -0.01
UPF1-211ENST00000600868 BUB1O43683 1085 aa14.97□□□□□ -0.01
UPF1-211ENST00000600868 TRUB2O95900 331 aaKnown RBP14.97□□□□□ -0.01
UPF1-211ENST00000600868 TBX18O95935 607 aa14.97□□□□□ -0.01
UPF1-211ENST00000600868 IGLV3-25P01717 112 aa14.97□□□□□ -0.01
UPF1-211ENST00000600868 CEBPBP17676 345 aa14.97□□□□□ -0.01
UPF1-211ENST00000600868 GBP1P32455 592 aa14.97□□□□□ -0.01
UPF1-211ENST00000600868 MAN1A1P33908 653 aa14.97□□□□□ -0.01
UPF1-211ENST00000600868 SULT1E1P49888 294 aa14.97□□□□□ -0.01
UPF1-211ENST00000600868 NAP1L1P55209 391 aaKnown RBP14.97□□□□□ -0.01
UPF1-211ENST00000600868 EFEMP1Q12805 493 aa14.97□□□□□ -0.01
UPF1-211ENST00000600868 EIF4EBP2Q13542 120 aaPredicted RBP14.97□□□□□ -0.01
UPF1-211ENST00000600868 SKIV2LQ15477 1246 aaKnown RBP14.97□□□□□ -0.01
UPF1-211ENST00000600868 GPR158Q5T848 1215 aa14.97□□□□□ -0.01
UPF1-211ENST00000600868 OTUD1Q5VV17 481 aaPredicted RBP14.97□□□□□ -0.01
UPF1-211ENST00000600868 STRADAQ7RTN6 431 aa14.97□□□□□ -0.01
UPF1-211ENST00000600868 MAB21L3Q8N8X9 362 aa14.97□□□□□ -0.01
UPF1-211ENST00000600868 ITFG1Q8TB96 612 aa14.97□□□□□ -0.01
UPF1-211ENST00000600868 SUSD6Q92537 303 aa14.97□□□□□ -0.01
UPF1-211ENST00000600868 HLA-CQ95604 372 aa14.97□□□□□ -0.01
UPF1-211ENST00000600868 BTBD6Q96KE9 485 aa14.97□□□□□ -0.01
UPF1-211ENST00000600868 SERPINB11Q96P15 392 aa14.97□□□□□ -0.01
UPF1-211ENST00000600868 TBCBQ99426 244 aa14.97□□□□□ -0.01
UPF1-211ENST00000600868 NCAPGQ9BPX3 1015 aa14.97□□□□□ -0.01
UPF1-211ENST00000600868 SLC46A2Q9BY10 475 aa14.97□□□□□ -0.01
UPF1-211ENST00000600868 RNF38Q9H0F5 515 aa14.97□□□□□ -0.01
UPF1-211ENST00000600868 TRPC7Q9HCX4 862 aa14.97□□□□□ -0.01
UPF1-211ENST00000600868 CDH22Q9UJ99 828 aa14.97□□□□□ -0.01
UPF1-211ENST00000600868 NUDT5Q9UKK9 219 aa14.97□□□□□ -0.01
UPF1-211ENST00000600868 PAXBP1Q9Y5B6 917 aa14.97□□□□□ -0.01
UPF1-211ENST00000600868 M0QYT0 321 aa14.96□□□□□ -0.01
UPF1-211ENST00000600868 BUB1BO60566 1050 aaPredicted RBP14.96□□□□□ -0.01
UPF1-211ENST00000600868 PROSCO94903 275 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms