RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 SKOR2Q2VWA4 1001 aaPredicted RBP16.98■□□□□ 0.31
LSM4-206ENST00000600289 PMF1Q6P1K2 205 aa16.98■□□□□ 0.31
LSM4-206ENST00000600289 FAM71AQ8IYT1 594 aa16.98■□□□□ 0.31
LSM4-206ENST00000600289 SIX6OS1Q8N1H7 587 aa16.98■□□□□ 0.31
LSM4-206ENST00000600289 AOPEPQ8N6M6 819 aa16.98■□□□□ 0.31
LSM4-206ENST00000600289 IRGQQ8WZA9 623 aa16.98■□□□□ 0.31
LSM4-206ENST00000600289 COL26A1Q96A83 441 aa16.98■□□□□ 0.31
LSM4-206ENST00000600289 NACA2Q9H009 215 aa16.98■□□□□ 0.31
LSM4-206ENST00000600289 VPS16Q9H269 839 aa16.98■□□□□ 0.31
LSM4-206ENST00000600289 DNMT3LQ9UJW3 386 aa16.98■□□□□ 0.31
LSM4-206ENST00000600289 PCDHGC3Q9UN70 934 aa16.98■□□□□ 0.31
LSM4-206ENST00000600289 LGALS16A8MUM7 142 aa16.97■□□□□ 0.31
LSM4-206ENST00000600289 PES1O00541 588 aaKnown RBP16.97■□□□□ 0.31
LSM4-206ENST00000600289 GREM1O60565 184 aa16.97■□□□□ 0.31
LSM4-206ENST00000600289 GABBR2O75899 941 aa16.97■□□□□ 0.31
LSM4-206ENST00000600289 CALCAP01258 141 aa16.97■□□□□ 0.31
LSM4-206ENST00000600289 DCNP07585 359 aaKnown RBP16.97■□□□□ 0.31
LSM4-206ENST00000600289 UCHL3P15374 230 aa16.97■□□□□ 0.31
LSM4-206ENST00000600289 GJA4P35212 333 aa16.97■□□□□ 0.31
LSM4-206ENST00000600289 DAOAP59103 153 aa16.97■□□□□ 0.31
LSM4-206ENST00000600289 GOLGA8FQ08AF8 430 aa16.97■□□□□ 0.31
LSM4-206ENST00000600289 GOLGA8DPQ0D2H9 430 aa16.97■□□□□ 0.31
LSM4-206ENST00000600289 LRRC32Q14392 662 aa16.97■□□□□ 0.31
LSM4-206ENST00000600289 FKBP15Q5T1M5 1219 aa16.97■□□□□ 0.31
LSM4-206ENST00000600289 TXNDC11Q6PKC3 985 aa16.97■□□□□ 0.31
LSM4-206ENST00000600289 MAMSTRQ6ZN01 415 aa16.97■□□□□ 0.31
LSM4-206ENST00000600289 DHX40Q8IX18 779 aaKnown RBP16.97■□□□□ 0.31
LSM4-206ENST00000600289 LSM14BQ9BX40 385 aaKnown RBP16.97■□□□□ 0.31
LSM4-206ENST00000600289 GANQ9H2C0 597 aa16.97■□□□□ 0.31
LSM4-206ENST00000600289 CHRDQ9H2X0 955 aa16.97■□□□□ 0.31
LSM4-206ENST00000600289 CDV3Q9UKY7 258 aaKnown RBP16.97■□□□□ 0.31
LSM4-206ENST00000600289 FHOD1Q9Y613 1164 aa16.97■□□□□ 0.31
LSM4-206ENST00000600289 MYOFQ9NZM1 2061 aa16.97■□□□□ 0.31
LSM4-206ENST00000600289 SMTNL1A8MU46 457 aa16.96■□□□□ 0.31
LSM4-206ENST00000600289 FOXN3O00409 490 aaPredicted RBP16.96■□□□□ 0.31
LSM4-206ENST00000600289 TRDMT1O14717 391 aaKnown RBP16.96■□□□□ 0.31
LSM4-206ENST00000600289 THAP12O43422 761 aa16.96■□□□□ 0.31
LSM4-206ENST00000600289 FBXO21O94952 628 aa16.96■□□□□ 0.31
LSM4-206ENST00000600289 TBX18O95935 607 aa16.96■□□□□ 0.31
LSM4-206ENST00000600289 CHRNB1P11230 501 aa16.96■□□□□ 0.31
LSM4-206ENST00000600289 CLCN1P35523 988 aa16.96■□□□□ 0.31
LSM4-206ENST00000600289 ACADSBP45954 432 aa16.96■□□□□ 0.31
LSM4-206ENST00000600289 BPIFB4P59827 614 aa16.96■□□□□ 0.31
LSM4-206ENST00000600289 PTK2Q05397 1052 aa16.96■□□□□ 0.31
LSM4-206ENST00000600289 NR1H3Q13133 447 aa16.96■□□□□ 0.31
LSM4-206ENST00000600289 CCINQ13939 588 aa16.96■□□□□ 0.31
LSM4-206ENST00000600289 DGKKQ5KSL6 1271 aa16.96■□□□□ 0.31
LSM4-206ENST00000600289 HTR3DQ70Z44 454 aa16.96■□□□□ 0.31
LSM4-206ENST00000600289 ADGRG2Q8IZP9 1017 aa16.96■□□□□ 0.31
LSM4-206ENST00000600289 SYNPOQ8N3V7 929 aa16.96■□□□□ 0.31
LSM4-206ENST00000600289 EXOC4Q96A65 974 aa16.96■□□□□ 0.31
LSM4-206ENST00000600289 RTKNQ9BST9 563 aa16.96■□□□□ 0.31
LSM4-206ENST00000600289 SLC4A5Q9BY07 1137 aa16.96■□□□□ 0.31
LSM4-206ENST00000600289 STK33Q9BYT3 514 aa16.96■□□□□ 0.31
LSM4-206ENST00000600289 LINC00597Q9H2U6 94 aa16.96■□□□□ 0.31
LSM4-206ENST00000600289 OLA1Q9NTK5 396 aaKnown RBP16.96■□□□□ 0.31
LSM4-206ENST00000600289 SIK3Q9Y2K2 1263 aa16.96■□□□□ 0.31
LSM4-206ENST00000600289 SH3BP1Q9Y3L3 701 aa16.96■□□□□ 0.31
LSM4-206ENST00000600289 ZFYVE26Q68DK2 2539 aa16.95■□□□□ 0.3
LSM4-206ENST00000600289 SART1O43290 800 aaKnown RBP16.95■□□□□ 0.3
LSM4-206ENST00000600289 CAVIN2O95810 425 aa16.95■□□□□ 0.3
LSM4-206ENST00000600289 CYP17A1P05093 508 aa16.95■□□□□ 0.3
LSM4-206ENST00000600289 USP8P40818 1118 aa16.95■□□□□ 0.3
LSM4-206ENST00000600289 ZNF165P49910 485 aa16.95■□□□□ 0.3
LSM4-206ENST00000600289 DRAP1Q14919 205 aaPredicted RBP16.95■□□□□ 0.3
LSM4-206ENST00000600289 TMEM196Q5HYL7 178 aa16.95■□□□□ 0.3
LSM4-206ENST00000600289 C10orf120Q5SQS8 335 aa16.95■□□□□ 0.3
LSM4-206ENST00000600289 DENND1BQ6P3S1 775 aa16.95■□□□□ 0.3
LSM4-206ENST00000600289 MAML2Q8IZL2 1156 aaPredicted RBP16.95■□□□□ 0.3
LSM4-206ENST00000600289 TTC8Q8TAM2 541 aa16.95■□□□□ 0.3
LSM4-206ENST00000600289 ERGIC2Q96RQ1 377 aa16.95■□□□□ 0.3
LSM4-206ENST00000600289 LHX5Q9H2C1 402 aa16.95■□□□□ 0.3
LSM4-206ENST00000600289 ACP6Q9NPH0 428 aa16.95■□□□□ 0.3
LSM4-206ENST00000600289 ABCC13Q9NSE7 274 aa16.95■□□□□ 0.3
LSM4-206ENST00000600289 NDRG2Q9UN36 371 aaKnown RBP16.95■□□□□ 0.3
LSM4-206ENST00000600289 SYCE3A1L190 88 aa16.94■□□□□ 0.3
LSM4-206ENST00000600289 YJEFN3A6XGL0 299 aa16.94■□□□□ 0.3
LSM4-206ENST00000600289 E7ENQ6 273 aa16.94■□□□□ 0.3
LSM4-206ENST00000600289 F8VZ95 297 aa16.94■□□□□ 0.3
LSM4-206ENST00000600289 LCP1P13796 627 aa16.94■□□□□ 0.3
LSM4-206ENST00000600289 CDK11BP21127 795 aaKnown RBP16.94■□□□□ 0.3
LSM4-206ENST00000600289 EIF2DP41214 584 aaKnown RBP16.94■□□□□ 0.3
LSM4-206ENST00000600289 RGS7P49802 495 aa16.94■□□□□ 0.3
LSM4-206ENST00000600289 COG7P83436 770 aa16.94■□□□□ 0.3
LSM4-206ENST00000600289 RAPGEF1Q13905 1077 aa16.94■□□□□ 0.3
LSM4-206ENST00000600289 IQCB1Q15051 598 aa16.94■□□□□ 0.3
LSM4-206ENST00000600289 PON2Q15165 354 aa16.94■□□□□ 0.3
LSM4-206ENST00000600289 DHCR24Q15392 516 aa16.94■□□□□ 0.3
LSM4-206ENST00000600289 GAB4Q2WGN9 574 aa16.94■□□□□ 0.3
LSM4-206ENST00000600289 BSPRYQ5W0U4 402 aa16.94■□□□□ 0.3
LSM4-206ENST00000600289 BTBD8Q5XKL5 378 aa16.94■□□□□ 0.3
LSM4-206ENST00000600289 MSANTD2Q6P1R3 559 aa16.94■□□□□ 0.3
LSM4-206ENST00000600289 Q6ZNB5 142 aa16.94■□□□□ 0.3
LSM4-206ENST00000600289 BEND5Q7L4P6 421 aa16.94■□□□□ 0.3
LSM4-206ENST00000600289 TMEM110Q86TL2 294 aa16.94■□□□□ 0.3
LSM4-206ENST00000600289 C1orf210Q8IVY1 113 aa16.94■□□□□ 0.3
LSM4-206ENST00000600289 LMAN1LQ9HAT1 526 aa16.94■□□□□ 0.3
LSM4-206ENST00000600289 NCDNQ9UBB6 729 aa16.94■□□□□ 0.3
LSM4-206ENST00000600289 LSM7Q9UK45 103 aaKnown RBP16.94■□□□□ 0.3
LSM4-206ENST00000600289 STRIP2Q9ULQ0 834 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms