RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 INCA1Q0VD86 236 aa22.32■■□□□ 1.16
PNKP-212ENST00000599454 STK4Q13043 487 aa22.32■■□□□ 1.16
PNKP-212ENST00000599454 HNRNPDQ14103 355 aaKnown RBP22.32■■□□□ 1.16
PNKP-212ENST00000599454 SV2AQ7L0J3 742 aa22.32■■□□□ 1.16
PNKP-212ENST00000599454 C12orf29Q8N999 325 aa22.32■■□□□ 1.16
PNKP-212ENST00000599454 GTPBP2Q9BX10 602 aaKnown RBP22.32■■□□□ 1.16
PNKP-212ENST00000599454 DNAI2Q9GZS0 605 aa22.32■■□□□ 1.16
PNKP-212ENST00000599454 KCTD10Q9H3F6 313 aa22.32■■□□□ 1.16
PNKP-212ENST00000599454 CD248Q9HCU0 757 aa22.32■■□□□ 1.16
PNKP-212ENST00000599454 HMGXB4Q9UGU5 601 aa22.32■■□□□ 1.16
PNKP-212ENST00000599454 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.31■■□□□ 1.16
PNKP-212ENST00000599454 H0Y626 953 aa22.31■■□□□ 1.16
PNKP-212ENST00000599454 TRIM16O95361 564 aa22.31■■□□□ 1.16
PNKP-212ENST00000599454 SYPP08247 313 aa22.31■■□□□ 1.16
PNKP-212ENST00000599454 NDUFV2P19404 249 aa22.31■■□□□ 1.16
PNKP-212ENST00000599454 ADORA2BP29275 332 aa22.31■■□□□ 1.16
PNKP-212ENST00000599454 RDXP35241 583 aaKnown RBP22.31■■□□□ 1.16
PNKP-212ENST00000599454 PLA2G4AP47712 749 aa22.31■■□□□ 1.16
PNKP-212ENST00000599454 PSEN1P49768 467 aa22.31■■□□□ 1.16
PNKP-212ENST00000599454 ORC1Q13415 861 aa22.31■■□□□ 1.16
PNKP-212ENST00000599454 TPGS1Q6ZTW0 290 aa22.31■■□□□ 1.16
PNKP-212ENST00000599454 CLEC20AQ6ZU45 233 aa22.31■■□□□ 1.16
PNKP-212ENST00000599454 TADA2BQ86TJ2 420 aa22.31■■□□□ 1.16
PNKP-212ENST00000599454 ELMO3Q96BJ8 720 aa22.31■■□□□ 1.16
PNKP-212ENST00000599454 IMPG2Q9BZV3 1241 aa22.31■■□□□ 1.16
PNKP-212ENST00000599454 DNMT3LQ9UJW3 386 aa22.31■■□□□ 1.16
PNKP-212ENST00000599454 CFAP45Q9UL16 551 aa22.31■■□□□ 1.16
PNKP-212ENST00000599454 FRMD4BQ9Y2L6 1034 aa22.31■■□□□ 1.16
PNKP-212ENST00000599454 CKAP5Q14008 2032 aa22.31■■□□□ 1.16
PNKP-212ENST00000599454 PKD1L2Q7Z442 2459 aa22.3■■□□□ 1.16
PNKP-212ENST00000599454 PRRT4C9JH25 899 aa22.3■■□□□ 1.16
PNKP-212ENST00000599454 HHLA1C9JL84 531 aa22.3■■□□□ 1.16
PNKP-212ENST00000599454 ARHGAP33O14559 1287 aa22.3■■□□□ 1.16
PNKP-212ENST00000599454 MAPK13O15264 365 aa22.3■■□□□ 1.16
PNKP-212ENST00000599454 CYP26A1O43174 497 aa22.3■■□□□ 1.16
PNKP-212ENST00000599454 F13A1P00488 732 aa22.3■■□□□ 1.16
PNKP-212ENST00000599454 ZSCAN22P10073 491 aaPredicted RBP22.3■■□□□ 1.16
PNKP-212ENST00000599454 PIK3CAP42336 1068 aa22.3■■□□□ 1.16
PNKP-212ENST00000599454 DGKGP49619 791 aa22.3■■□□□ 1.16
PNKP-212ENST00000599454 SIM1P81133 766 aaPredicted RBP22.3■■□□□ 1.16
PNKP-212ENST00000599454 GPRIN1Q7Z2K8 1008 aa22.3■■□□□ 1.16
PNKP-212ENST00000599454 GRAMD1CQ8IYS0 662 aa22.3■■□□□ 1.16
PNKP-212ENST00000599454 ZNF276Q8N554 614 aa22.3■■□□□ 1.16
PNKP-212ENST00000599454 DEFB119Q8N690 84 aa22.3■■□□□ 1.16
PNKP-212ENST00000599454 ACOX2Q99424 681 aa22.3■■□□□ 1.16
PNKP-212ENST00000599454 FAM124BQ9H5Z6 455 aaPredicted RBP22.3■■□□□ 1.16
PNKP-212ENST00000599454 CYP3A43Q9HB55 503 aa22.3■■□□□ 1.16
PNKP-212ENST00000599454 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.3■■□□□ 1.16
PNKP-212ENST00000599454 OSER1Q9NX31 292 aa22.3■■□□□ 1.16
PNKP-212ENST00000599454 SUSD2Q9UGT4 822 aa22.3■■□□□ 1.16
PNKP-212ENST00000599454 SERTAD1Q9UHV2 236 aa22.3■■□□□ 1.16
PNKP-212ENST00000599454 ZNF510Q9Y2H8 683 aa22.3■■□□□ 1.16
PNKP-212ENST00000599454 MSRB2Q9Y3D2 182 aa22.3■■□□□ 1.16
PNKP-212ENST00000599454 ZFHX4Q86UP3 3567 aa22.3■■□□□ 1.16
PNKP-212ENST00000599454 NPC1O15118 1278 aa22.29■■□□□ 1.16
PNKP-212ENST00000599454 HLA-DRAP01903 254 aa22.29■■□□□ 1.16
PNKP-212ENST00000599454 MYL1P05976 194 aa22.29■■□□□ 1.16
PNKP-212ENST00000599454 CISD3P0C7P0 127 aa22.29■■□□□ 1.16
PNKP-212ENST00000599454 RARGP13631 454 aa22.29■■□□□ 1.16
PNKP-212ENST00000599454 ACO1P21399 889 aaKnown RBP22.29■■□□□ 1.16
PNKP-212ENST00000599454 KMT5BQ4FZB7 885 aa22.29■■□□□ 1.16
PNKP-212ENST00000599454 FOXD4L5Q5VV16 416 aaPredicted RBP22.29■■□□□ 1.16
PNKP-212ENST00000599454 KIAA1211LQ6NV74 962 aa22.29■■□□□ 1.16
PNKP-212ENST00000599454 Q6ZNB5 142 aa22.29■■□□□ 1.16
PNKP-212ENST00000599454 TOGARAM2Q6ZUX3 1019 aa22.29■■□□□ 1.16
PNKP-212ENST00000599454 SLC41A1Q8IVJ1 513 aa22.29■■□□□ 1.16
PNKP-212ENST00000599454 MINDY1Q8N5J2 469 aa22.29■■□□□ 1.16
PNKP-212ENST00000599454 TRIML1Q8N9V2 468 aa22.29■■□□□ 1.16
PNKP-212ENST00000599454 FOXD4L4Q8WXT5 416 aaPredicted RBP22.29■■□□□ 1.16
PNKP-212ENST00000599454 FOXJ1Q92949 421 aa22.29■■□□□ 1.16
PNKP-212ENST00000599454 CYFIP2Q96F07 1278 aa22.29■■□□□ 1.16
PNKP-212ENST00000599454 PAGE5Q96GU1 130 aa22.29■■□□□ 1.16
PNKP-212ENST00000599454 ZNF419Q96HQ0 510 aaPredicted RBP22.29■■□□□ 1.16
PNKP-212ENST00000599454 HSPA12BQ96MM6 686 aa22.29■■□□□ 1.16
PNKP-212ENST00000599454 CDK5RAP1Q96SZ6 601 aaKnown RBP22.29■■□□□ 1.16
PNKP-212ENST00000599454 NT5C1AQ9BXI3 368 aa22.29■■□□□ 1.16
PNKP-212ENST00000599454 DNAAF2Q9NVR5 837 aaKnown RBP22.29■■□□□ 1.16
PNKP-212ENST00000599454 USP25Q9UHP3 1055 aa22.29■■□□□ 1.16
PNKP-212ENST00000599454 CYP8B1Q9UNU6 501 aa22.29■■□□□ 1.16
PNKP-212ENST00000599454 AKAP13Q12802 2813 aa22.29■■□□□ 1.16
PNKP-212ENST00000599454 ZFYVE26Q68DK2 2539 aa22.28■■□□□ 1.16
PNKP-212ENST00000599454 SPAARA0A1B0GVQ0 90 aa22.28■■□□□ 1.16
PNKP-212ENST00000599454 A0A1W2PQH9 124 aa22.28■■□□□ 1.16
PNKP-212ENST00000599454 ACTN4O43707 911 aaKnown RBP22.28■■□□□ 1.16
PNKP-212ENST00000599454 HYAL3O43820 417 aaPredicted RBP22.28■■□□□ 1.16
PNKP-212ENST00000599454 CALUO43852 315 aaPredicted RBP22.28■■□□□ 1.16
PNKP-212ENST00000599454 NDUFS2O75306 463 aa22.28■■□□□ 1.16
PNKP-212ENST00000599454 KIF20AO95235 890 aa22.28■■□□□ 1.16
PNKP-212ENST00000599454 ZNF132P52740 706 aa22.28■■□□□ 1.16
PNKP-212ENST00000599454 SLC14A1Q13336 389 aa22.28■■□□□ 1.16
PNKP-212ENST00000599454 E2F5Q15329 346 aa22.28■■□□□ 1.16
PNKP-212ENST00000599454 C10orf120Q5SQS8 335 aa22.28■■□□□ 1.16
PNKP-212ENST00000599454 SYCP2LQ5T4T6 812 aa22.28■■□□□ 1.16
PNKP-212ENST00000599454 CEP135Q66GS9 1140 aa22.28■■□□□ 1.16
PNKP-212ENST00000599454 SPOPLQ6IQ16 392 aa22.28■■□□□ 1.16
PNKP-212ENST00000599454 SNX21Q969T3 373 aa22.28■■□□□ 1.16
PNKP-212ENST00000599454 NMUR1Q9HB89 426 aa22.28■■□□□ 1.16
PNKP-212ENST00000599454 FSCN3Q9NQT6 498 aa22.28■■□□□ 1.16
PNKP-212ENST00000599454 FBXO10Q9UK96 956 aa22.28■■□□□ 1.16
PNKP-212ENST00000599454 GNSP15586 552 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms