RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 METTL5Q9NRN9 209 aaKnown RBP23.12■■□□□ 1.29
CHMP2A-204ENST00000597848 GKN1Q9NS71 199 aa23.12■■□□□ 1.29
CHMP2A-204ENST00000597848 SFMBT1Q9UHJ3 866 aa23.12■■□□□ 1.29
CHMP2A-204ENST00000597848 ARHGAP26Q9UNA1 814 aa23.12■■□□□ 1.29
CHMP2A-204ENST00000597848 CCL26Q9Y258 94 aa23.12■■□□□ 1.29
CHMP2A-204ENST00000597848 NUMBLQ9Y6R0 609 aa23.12■■□□□ 1.29
CHMP2A-204ENST00000597848 PRUNE2Q8WUY3 3088 aa23.11■■□□□ 1.29
CHMP2A-204ENST00000597848 ANHXE9PGG2 379 aa23.11■■□□□ 1.29
CHMP2A-204ENST00000597848 DAB1O75553 588 aa23.11■■□□□ 1.29
CHMP2A-204ENST00000597848 MYBL1P10243 752 aa23.11■■□□□ 1.29
CHMP2A-204ENST00000597848 KRT3P12035 628 aa23.11■■□□□ 1.29
CHMP2A-204ENST00000597848 FCARP24071 287 aa23.11■■□□□ 1.29
CHMP2A-204ENST00000597848 CYLC1P35663 651 aaPredicted RBP23.11■■□□□ 1.29
CHMP2A-204ENST00000597848 HTR4Q13639 388 aa23.11■■□□□ 1.29
CHMP2A-204ENST00000597848 SYPL2Q5VXT5 272 aa23.11■■□□□ 1.29
CHMP2A-204ENST00000597848 BEND5Q7L4P6 421 aa23.11■■□□□ 1.29
CHMP2A-204ENST00000597848 CCDC170Q8IYT3 715 aa23.11■■□□□ 1.29
CHMP2A-204ENST00000597848 C3orf20Q8ND61 904 aa23.11■■□□□ 1.29
CHMP2A-204ENST00000597848 SH3RF2Q8TEC5 729 aa23.11■■□□□ 1.29
CHMP2A-204ENST00000597848 RSAD2Q8WXG1 361 aa23.11■■□□□ 1.29
CHMP2A-204ENST00000597848 ELSPBP1Q96BH3 223 aa23.11■■□□□ 1.29
CHMP2A-204ENST00000597848 SLC2A13Q96QE2 648 aa23.11■■□□□ 1.29
CHMP2A-204ENST00000597848 KIF9Q9HAQ2 790 aa23.11■■□□□ 1.29
CHMP2A-204ENST00000597848 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.11■■□□□ 1.29
CHMP2A-204ENST00000597848 MYO1AQ9UBC5 1043 aa23.11■■□□□ 1.29
CHMP2A-204ENST00000597848 CNOT8Q9UFF9 292 aaKnown RBP23.11■■□□□ 1.29
CHMP2A-204ENST00000597848 SLC12A8A0AV02 714 aa23.1■■□□□ 1.29
CHMP2A-204ENST00000597848 SOWAHDA6NJG2 315 aa23.1■■□□□ 1.29
CHMP2A-204ENST00000597848 C19orf67A6NJJ6 358 aa23.1■■□□□ 1.29
CHMP2A-204ENST00000597848 HEPACAM2A8MVW5 462 aa23.1■■□□□ 1.29
CHMP2A-204ENST00000597848 LEFTY2O00292 366 aa23.1■■□□□ 1.29
CHMP2A-204ENST00000597848 ATMINO43313 823 aaPredicted RBP23.1■■□□□ 1.29
CHMP2A-204ENST00000597848 ECI2O75521 394 aa23.1■■□□□ 1.29
CHMP2A-204ENST00000597848 GJB6O95452 261 aa23.1■■□□□ 1.29
CHMP2A-204ENST00000597848 HMBSP08397 361 aa23.1■■□□□ 1.29
CHMP2A-204ENST00000597848 IRF1P10914 325 aa23.1■■□□□ 1.29
CHMP2A-204ENST00000597848 FECHP22830 423 aa23.1■■□□□ 1.29
CHMP2A-204ENST00000597848 GSCP56915 257 aaPredicted RBP23.1■■□□□ 1.29
CHMP2A-204ENST00000597848 MSANTD2Q6P1R3 559 aa23.1■■□□□ 1.29
CHMP2A-204ENST00000597848 DQX1Q8TE96 717 aaKnown RBP23.1■■□□□ 1.29
CHMP2A-204ENST00000597848 RSPRY1Q96DX4 576 aa23.1■■□□□ 1.29
CHMP2A-204ENST00000597848 RPP25Q9BUL9 199 aaKnown RBP23.1■■□□□ 1.29
CHMP2A-204ENST00000597848 KLF16Q9BXK1 252 aaPredicted RBP23.1■■□□□ 1.29
CHMP2A-204ENST00000597848 PLA2G2FQ9BZM2 168 aa23.1■■□□□ 1.29
CHMP2A-204ENST00000597848 KCNK12Q9HB15 430 aa23.1■■□□□ 1.29
CHMP2A-204ENST00000597848 PARVAQ9NVD7 372 aa23.1■■□□□ 1.29
CHMP2A-204ENST00000597848 IGSF9Q9P2J2 1179 aa23.1■■□□□ 1.29
CHMP2A-204ENST00000597848 TMEM59LQ9UK28 342 aa23.1■■□□□ 1.29
CHMP2A-204ENST00000597848 NENFQ9UMX5 172 aa23.1■■□□□ 1.29
CHMP2A-204ENST00000597848 OBSL1O75147 1896 aa23.09■■□□□ 1.29
CHMP2A-204ENST00000597848 DOCK8Q8NF50 2099 aa23.09■■□□□ 1.29
CHMP2A-204ENST00000597848 SIGLEC16A6NMB1 481 aa23.09■■□□□ 1.29
CHMP2A-204ENST00000597848 ASGR2P07307 311 aa23.09■■□□□ 1.29
CHMP2A-204ENST00000597848 H2AFZP0C0S5 128 aa23.09■■□□□ 1.29
CHMP2A-204ENST00000597848 NOS2P35228 1153 aa23.09■■□□□ 1.29
CHMP2A-204ENST00000597848 MATKP42679 507 aa23.09■■□□□ 1.29
CHMP2A-204ENST00000597848 GALCP54803 685 aa23.09■■□□□ 1.29
CHMP2A-204ENST00000597848 COG7P83436 770 aa23.09■■□□□ 1.29
CHMP2A-204ENST00000597848 SPA17Q15506 151 aa23.09■■□□□ 1.29
CHMP2A-204ENST00000597848 DCUN1D2Q6PH85 259 aa23.09■■□□□ 1.29
CHMP2A-204ENST00000597848 H2AFVQ71UI9 128 aa23.09■■□□□ 1.29
CHMP2A-204ENST00000597848 DDX42Q86XP3 938 aaKnown RBP eCLIP23.09■■□□□ 1.29
CHMP2A-204ENST00000597848 YAF2Q8IY57 180 aa23.09■■□□□ 1.29
CHMP2A-204ENST00000597848 EMC1Q8N766 993 aa23.09■■□□□ 1.29
CHMP2A-204ENST00000597848 ADAM32Q8TC27 787 aa23.09■■□□□ 1.29
CHMP2A-204ENST00000597848 ADAMTS19Q8TE59 1207 aa23.09■■□□□ 1.29
CHMP2A-204ENST00000597848 NXPE3Q969Y0 559 aa23.09■■□□□ 1.29
CHMP2A-204ENST00000597848 OBP2AQ9NY56 170 aa23.09■■□□□ 1.29
CHMP2A-204ENST00000597848 CFAP97Q9P2B7 532 aa23.09■■□□□ 1.29
CHMP2A-204ENST00000597848 EPN1Q9Y6I3 576 aaPredicted RBP23.09■■□□□ 1.29
CHMP2A-204ENST00000597848 ANAPC1Q9H1A4 1944 aa23.09■■□□□ 1.29
CHMP2A-204ENST00000597848 DENND4CQ5VZ89 1909 aa23.08■■□□□ 1.29
CHMP2A-204ENST00000597848 ANKRD62A6NC57 917 aa23.08■■□□□ 1.29
CHMP2A-204ENST00000597848 GPC5P78333 572 aa23.08■■□□□ 1.29
CHMP2A-204ENST00000597848 VITQ6UXI7 678 aa23.08■■□□□ 1.29
CHMP2A-204ENST00000597848 GJD3Q8N144 294 aa23.08■■□□□ 1.29
CHMP2A-204ENST00000597848 JOSD2Q8TAC2 188 aa23.08■■□□□ 1.29
CHMP2A-204ENST00000597848 BPIFB1Q8TDL5 484 aa23.08■■□□□ 1.29
CHMP2A-204ENST00000597848 ZFRQ96KR1 1074 aaKnown RBP23.08■■□□□ 1.29
CHMP2A-204ENST00000597848 NECAB3Q96P71 396 aaPredicted RBP23.08■■□□□ 1.29
CHMP2A-204ENST00000597848 THAP2Q9H0W7 228 aa23.08■■□□□ 1.29
CHMP2A-204ENST00000597848 SMOC2Q9H3U7 446 aa23.08■■□□□ 1.29
CHMP2A-204ENST00000597848 FAM204AQ9H8W3 233 aa23.08■■□□□ 1.29
CHMP2A-204ENST00000597848 STAP1Q9ULZ2 295 aa23.08■■□□□ 1.29
CHMP2A-204ENST00000597848 SH3BP1Q9Y3L3 701 aa23.08■■□□□ 1.29
CHMP2A-204ENST00000597848 TCF20Q9UGU0 1960 aaKnown RBP23.08■■□□□ 1.29
CHMP2A-204ENST00000597848 COL6A3P12111 3177 aa23.07■■□□□ 1.28
CHMP2A-204ENST00000597848 SYNJ2BP-COX16A0A087WUM0 186 aa23.07■■□□□ 1.28
CHMP2A-204ENST00000597848 TCRBV5S1A1TA0A578 114 aa23.07■■□□□ 1.28
CHMP2A-204ENST00000597848 MSI1O43347 362 aaKnown RBP23.07■■□□□ 1.28
CHMP2A-204ENST00000597848 TRUB2O95900 331 aaKnown RBP23.07■■□□□ 1.28
CHMP2A-204ENST00000597848 PTMAP06454 111 aaKnown RBP23.07■■□□□ 1.28
CHMP2A-204ENST00000597848 PDGFRAP16234 1089 aa23.07■■□□□ 1.28
CHMP2A-204ENST00000597848 GBP1P32455 592 aa23.07■■□□□ 1.28
CHMP2A-204ENST00000597848 RFC1P35251 1148 aaPredicted RBP23.07■■□□□ 1.28
CHMP2A-204ENST00000597848 FLT3P36888 993 aa23.07■■□□□ 1.28
CHMP2A-204ENST00000597848 ZXDBP98169 803 aa23.07■■□□□ 1.28
CHMP2A-204ENST00000597848 MAMLD1Q13495 774 aa23.07■■□□□ 1.28
CHMP2A-204ENST00000597848 GRM2Q14416 872 aa23.07■■□□□ 1.28
CHMP2A-204ENST00000597848 MTF1Q14872 753 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms