RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 ANTXRLA6NF34 631 aa18.82■□□□□ 0.6
CHMP2A-203ENST00000597209 O00370 1275 aa18.82■□□□□ 0.6
CHMP2A-203ENST00000597209 MDM4O15151 490 aa18.82■□□□□ 0.6
CHMP2A-203ENST00000597209 CACNG3O60359 315 aa18.82■□□□□ 0.6
CHMP2A-203ENST00000597209 EPN2O95208 641 aa18.82■□□□□ 0.6
CHMP2A-203ENST00000597209 FGFR1OPO95684 399 aaKnown RBP18.82■□□□□ 0.6
CHMP2A-203ENST00000597209 ZBED1O96006 694 aa18.82■□□□□ 0.6
CHMP2A-203ENST00000597209 SETSIPP0DME0 302 aa18.82■□□□□ 0.6
CHMP2A-203ENST00000597209 CD19P15391 556 aa18.82■□□□□ 0.6
CHMP2A-203ENST00000597209 TIE1P35590 1138 aa18.82■□□□□ 0.6
CHMP2A-203ENST00000597209 TKTL1P51854 596 aa18.82■□□□□ 0.6
CHMP2A-203ENST00000597209 YWHAGP61981 247 aaKnown RBP eCLIP18.82■□□□□ 0.6
CHMP2A-203ENST00000597209 KDSRQ06136 332 aa18.82■□□□□ 0.6
CHMP2A-203ENST00000597209 PKDCCQ504Y2 493 aa18.82■□□□□ 0.6
CHMP2A-203ENST00000597209 EOGTQ5NDL2 527 aa18.82■□□□□ 0.6
CHMP2A-203ENST00000597209 LCLAT1Q6UWP7 414 aa18.82■□□□□ 0.6
CHMP2A-203ENST00000597209 KBTBD6Q86V97 674 aa18.82■□□□□ 0.6
CHMP2A-203ENST00000597209 C11orf74Q86VG3 221 aa18.82■□□□□ 0.6
CHMP2A-203ENST00000597209 SFTPA1Q8IWL2 248 aa18.82■□□□□ 0.6
CHMP2A-203ENST00000597209 SCML4Q8N228 414 aa18.82■□□□□ 0.6
CHMP2A-203ENST00000597209 CCDC33Q8N5R6 958 aa18.82■□□□□ 0.6
CHMP2A-203ENST00000597209 ALLCQ8N6M5 410 aa18.82■□□□□ 0.6
CHMP2A-203ENST00000597209 NAT16Q8N8M0 369 aa18.82■□□□□ 0.6
CHMP2A-203ENST00000597209 TERB1Q8NA31 727 aa18.82■□□□□ 0.6
CHMP2A-203ENST00000597209 TXNDC5Q8NBS9 432 aaKnown RBP18.82■□□□□ 0.6
CHMP2A-203ENST00000597209 EHBP1Q8NDI1 1231 aa18.82■□□□□ 0.6
CHMP2A-203ENST00000597209 KCTD13Q8WZ19 329 aa18.82■□□□□ 0.6
CHMP2A-203ENST00000597209 CNOT6LQ96LI5 555 aaKnown RBP18.82■□□□□ 0.6
CHMP2A-203ENST00000597209 XPO6Q96QU8 1125 aaKnown RBP18.82■□□□□ 0.6
CHMP2A-203ENST00000597209 DCLK3Q9C098 648 aa18.82■□□□□ 0.6
CHMP2A-203ENST00000597209 KIAA1468Q9P260 1216 aa18.82■□□□□ 0.6
CHMP2A-203ENST00000597209 PCDHGA5Q9Y5G8 931 aa18.82■□□□□ 0.6
CHMP2A-203ENST00000597209 ALDH1A2O94788 518 aa18.81■□□□□ 0.6
CHMP2A-203ENST00000597209 KLF8O95600 359 aaPredicted RBP18.81■□□□□ 0.6
CHMP2A-203ENST00000597209 STX17P56962 302 aa18.81■□□□□ 0.6
CHMP2A-203ENST00000597209 GCNT1Q02742 428 aa18.81■□□□□ 0.6
CHMP2A-203ENST00000597209 KCNH2Q12809 1159 aa18.81■□□□□ 0.6
CHMP2A-203ENST00000597209 STILQ15468 1287 aa18.81■□□□□ 0.6
CHMP2A-203ENST00000597209 CNGA2Q16280 664 aa18.81■□□□□ 0.6
CHMP2A-203ENST00000597209 PLK5Q496M5 336 aa18.81■□□□□ 0.6
CHMP2A-203ENST00000597209 EMC10Q5UCC4 262 aa18.81■□□□□ 0.6
CHMP2A-203ENST00000597209 TMEM270Q6UE05 265 aa18.81■□□□□ 0.6
CHMP2A-203ENST00000597209 TMEM92Q6UXU6 159 aa18.81■□□□□ 0.6
CHMP2A-203ENST00000597209 BHLHA9Q7RTU4 235 aa18.81■□□□□ 0.6
CHMP2A-203ENST00000597209 TRMT11Q7Z4G4 463 aaKnown RBP18.81■□□□□ 0.6
CHMP2A-203ENST00000597209 PPM1KQ8N3J5 372 aa18.81■□□□□ 0.6
CHMP2A-203ENST00000597209 BBS2Q9BXC9 721 aa18.81■□□□□ 0.6
CHMP2A-203ENST00000597209 SRRTQ9BXP5 876 aaKnown RBP18.81■□□□□ 0.6
CHMP2A-203ENST00000597209 ULBP1Q9BZM6 244 aa18.81■□□□□ 0.6
CHMP2A-203ENST00000597209 LRRC4Q9HBW1 653 aa18.81■□□□□ 0.6
CHMP2A-203ENST00000597209 RASAL2Q9UJF2 1139 aa18.81■□□□□ 0.6
CHMP2A-203ENST00000597209 STRIP2Q9ULQ0 834 aa18.81■□□□□ 0.6
CHMP2A-203ENST00000597209 NEDD8-MDP1E9PL57 170 aa18.8■□□□□ 0.6
CHMP2A-203ENST00000597209 SGK1O00141 431 aa18.8■□□□□ 0.6
CHMP2A-203ENST00000597209 TULP2O00295 520 aa18.8■□□□□ 0.6
CHMP2A-203ENST00000597209 RHOBTB1O94844 696 aa18.8■□□□□ 0.6
CHMP2A-203ENST00000597209 AFPP02771 609 aaKnown RBP18.8■□□□□ 0.6
CHMP2A-203ENST00000597209 KLKB1P03952 638 aa18.8■□□□□ 0.6
CHMP2A-203ENST00000597209 TYRP14679 529 aa18.8■□□□□ 0.6
CHMP2A-203ENST00000597209 EFEMP1Q12805 493 aa18.8■□□□□ 0.6
CHMP2A-203ENST00000597209 USP39Q53GS9 565 aaKnown RBP18.8■□□□□ 0.6
CHMP2A-203ENST00000597209 GRAMD4Q6IC98 578 aa18.8■□□□□ 0.6
CHMP2A-203ENST00000597209 PRR23CQ6ZRP0 262 aa18.8■□□□□ 0.6
CHMP2A-203ENST00000597209 TPGS1Q6ZTW0 290 aa18.8■□□□□ 0.6
CHMP2A-203ENST00000597209 DGLUCYQ7Z3D6 616 aa18.8■□□□□ 0.6
CHMP2A-203ENST00000597209 MIB1Q86YT6 1006 aa18.8■□□□□ 0.6
CHMP2A-203ENST00000597209 DUSP15Q9H1R2 295 aaPredicted RBP18.8■□□□□ 0.6
CHMP2A-203ENST00000597209 POLMQ9NP87 494 aaPredicted RBP18.8■□□□□ 0.6
CHMP2A-203ENST00000597209 OLA1Q9NTK5 396 aaKnown RBP18.8■□□□□ 0.6
CHMP2A-203ENST00000597209 DNAJC17Q9NVM6 304 aaKnown RBP18.8■□□□□ 0.6
CHMP2A-203ENST00000597209 RWDD2AQ9UIY3 292 aa18.8■□□□□ 0.6
CHMP2A-203ENST00000597209 FBXO10Q9UK96 956 aa18.8■□□□□ 0.6
CHMP2A-203ENST00000597209 PCDHB4Q9Y5E5 795 aa18.8■□□□□ 0.6
CHMP2A-203ENST00000597209 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.8■□□□□ 0.6
CHMP2A-203ENST00000597209 CISD3P0C7P0 127 aa18.79■□□□□ 0.6
CHMP2A-203ENST00000597209 ZNF806P0C7X5 589 aa18.79■□□□□ 0.6
CHMP2A-203ENST00000597209 HNRNPLP14866 589 aaKnown RBP eCLIP18.79■□□□□ 0.6
CHMP2A-203ENST00000597209 CHKAP35790 457 aa18.79■□□□□ 0.6
CHMP2A-203ENST00000597209 ELF2Q15723 593 aa18.79■□□□□ 0.6
CHMP2A-203ENST00000597209 PLA2G2CQ5R387 149 aa18.79■□□□□ 0.6
CHMP2A-203ENST00000597209 C10orf76Q5T2E6 689 aa18.79■□□□□ 0.6
CHMP2A-203ENST00000597209 RSRC2Q7L4I2 434 aaKnown RBP18.79■□□□□ 0.6
CHMP2A-203ENST00000597209 OLIG1Q8TAK6 271 aa18.79■□□□□ 0.6
CHMP2A-203ENST00000597209 UBA3Q8TBC4 463 aa18.79■□□□□ 0.6
CHMP2A-203ENST00000597209 NETO1Q8TDF5 533 aa18.79■□□□□ 0.6
CHMP2A-203ENST00000597209 SLC35F5Q8WV83 523 aa18.79■□□□□ 0.6
CHMP2A-203ENST00000597209 TFAP2BQ92481 460 aa18.79■□□□□ 0.6
CHMP2A-203ENST00000597209 RTKNQ9BST9 563 aa18.79■□□□□ 0.6
CHMP2A-203ENST00000597209 ARRDC1-AS1Q9H2J1 176 aa18.79■□□□□ 0.6
CHMP2A-203ENST00000597209 CNGB3Q9NQW8 809 aa18.79■□□□□ 0.6
CHMP2A-203ENST00000597209 MARCH2Q9P0N8 246 aa18.79■□□□□ 0.6
CHMP2A-203ENST00000597209 CDV3Q9UKY7 258 aaKnown RBP18.79■□□□□ 0.6
CHMP2A-203ENST00000597209 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.79■□□□□ 0.6
CHMP2A-203ENST00000597209 CNTN6Q9UQ52 1028 aa18.79■□□□□ 0.6
CHMP2A-203ENST00000597209 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.79■□□□□ 0.6
CHMP2A-203ENST00000597209 SPAG17Q6Q759 2223 aa18.78■□□□□ 0.6
CHMP2A-203ENST00000597209 CEP250Q9BV73 2442 aa18.78■□□□□ 0.6
CHMP2A-203ENST00000597209 RNF225M0QZC1 329 aaPredicted RBP18.78■□□□□ 0.6
CHMP2A-203ENST00000597209 ADAM23O75077 832 aa18.78■□□□□ 0.6
CHMP2A-203ENST00000597209 PENKP01210 267 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms