RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 FAM155AB1AL88 458 aaPredicted RBP17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 PIRO00625 290 aa17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 DUSP11O75319 330 aaKnown RBP17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 CD4P01730 458 aa17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 IGHA2P01877 340 aa17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 CTSHP09668 335 aa17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 FGFR1P11362 822 aa17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 ADORA2BP29275 332 aa17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 PTPN7P35236 360 aa17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 VHLP40337 213 aa17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 ARSEP51690 589 aa17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 OCRLQ01968 901 aa17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 STILQ15468 1287 aa17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 FAM47CQ5HY64 1035 aa17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 SPDYAQ5MJ70 313 aa17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 KBTBD7Q8WVZ9 684 aa17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 MAGEB18Q96M61 343 aa17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 CFAP57Q96MR6 1250 aa17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 PEBP4Q96S96 227 aa17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 VCX3BQ9H321 246 aa17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 VCX3AQ9NNX9 186 aa17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 PDP2Q9P2J9 529 aa17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 GABRQQ9UN88 632 aa17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 C2CD4BA6NLJ0 364 aa17.74■□□□□ 0.43
SHKBP1-205ENST00000594973 SGK1O00141 431 aa17.74■□□□□ 0.43
SHKBP1-205ENST00000594973 TRUB2O95900 331 aaKnown RBP17.74■□□□□ 0.43
SHKBP1-205ENST00000594973 GM2AP17900 193 aa17.74■□□□□ 0.43
SHKBP1-205ENST00000594973 GNL1P36915 607 aaPredicted RBP17.74■□□□□ 0.43
SHKBP1-205ENST00000594973 VCPP55072 806 aaKnown RBP17.74■□□□□ 0.43
SHKBP1-205ENST00000594973 SREBF2Q12772 1141 aa17.74■□□□□ 0.43
SHKBP1-205ENST00000594973 LRRC14Q15048 493 aa17.74■□□□□ 0.43
SHKBP1-205ENST00000594973 ZRSR2Q15696 482 aaKnown RBP17.74■□□□□ 0.43
SHKBP1-205ENST00000594973 VSTM1Q6UX27 236 aa17.74■□□□□ 0.43
SHKBP1-205ENST00000594973 NME8Q8N427 588 aa17.74■□□□□ 0.43
SHKBP1-205ENST00000594973 ALLCQ8N6M5 410 aa17.74■□□□□ 0.43
SHKBP1-205ENST00000594973 ACTL9Q8TC94 416 aa17.74■□□□□ 0.43
SHKBP1-205ENST00000594973 TRIB2Q92519 343 aa17.74■□□□□ 0.43
SHKBP1-205ENST00000594973 CNPY3Q9BT09 278 aa17.74■□□□□ 0.43
SHKBP1-205ENST00000594973 CCDC28BQ9BUN5 200 aa17.74■□□□□ 0.43
SHKBP1-205ENST00000594973 TRPM7Q96QT4 1865 aa17.74■□□□□ 0.43
SHKBP1-205ENST00000594973 MAGEA13PA6NCF6 341 aa17.73■□□□□ 0.43
SHKBP1-205ENST00000594973 TRAFD1O14545 582 aaPredicted RBP17.73■□□□□ 0.43
SHKBP1-205ENST00000594973 HOXC8P31273 242 aa17.73■□□□□ 0.43
SHKBP1-205ENST00000594973 OTUD4Q01804 1114 aaKnown RBP17.73■□□□□ 0.43
SHKBP1-205ENST00000594973 CAV1Q03135 178 aa17.73■□□□□ 0.43
SHKBP1-205ENST00000594973 GPS1Q13098 491 aa17.73■□□□□ 0.43
SHKBP1-205ENST00000594973 KYNUQ16719 465 aa17.73■□□□□ 0.43
SHKBP1-205ENST00000594973 PABPC1LQ4VXU2 614 aaKnown RBP17.73■□□□□ 0.43
SHKBP1-205ENST00000594973 PKDCCQ504Y2 493 aa17.73■□□□□ 0.43
SHKBP1-205ENST00000594973 TRMT10CQ7L0Y3 403 aaKnown RBP17.73■□□□□ 0.43
SHKBP1-205ENST00000594973 RFX6Q8HWS3 928 aa17.73■□□□□ 0.43
SHKBP1-205ENST00000594973 PTPRN2Q92932 1015 aa17.73■□□□□ 0.43
SHKBP1-205ENST00000594973 ARHGEF2Q92974 986 aaKnown RBP17.73■□□□□ 0.43
SHKBP1-205ENST00000594973 SNX25Q9H3E2 840 aa17.73■□□□□ 0.43
SHKBP1-205ENST00000594973 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.73■□□□□ 0.43
SHKBP1-205ENST00000594973 MEIS3P2A8K0S8 358 aa17.73■□□□□ 0.43
SHKBP1-205ENST00000594973 ZSCAN9O15535 394 aaPredicted RBP17.73■□□□□ 0.43
SHKBP1-205ENST00000594973 KCNE1P15382 129 aa17.73■□□□□ 0.43
SHKBP1-205ENST00000594973 SH3BGRP55822 239 aaPredicted RBP17.73■□□□□ 0.43
SHKBP1-205ENST00000594973 TRIM32Q13049 653 aa17.73■□□□□ 0.43
SHKBP1-205ENST00000594973 OASLQ15646 514 aaKnown RBP17.73■□□□□ 0.43
SHKBP1-205ENST00000594973 CGB2Q6NT52 195 aa17.73■□□□□ 0.43
SHKBP1-205ENST00000594973 TAF2Q6P1X5 1199 aa17.73■□□□□ 0.43
SHKBP1-205ENST00000594973 SCYL2Q6P3W7 929 aa17.73■□□□□ 0.43
SHKBP1-205ENST00000594973 DRICH1Q6PGQ1 229 aaPredicted RBP17.73■□□□□ 0.43
SHKBP1-205ENST00000594973 OLFML1Q6UWY5 402 aa17.73■□□□□ 0.43
SHKBP1-205ENST00000594973 UNC93AQ86WB7 457 aa17.73■□□□□ 0.43
SHKBP1-205ENST00000594973 VSIG1Q86XK7 387 aa17.73■□□□□ 0.43
SHKBP1-205ENST00000594973 APPL2Q8NEU8 664 aa17.73■□□□□ 0.43
SHKBP1-205ENST00000594973 MIPOL1Q8TD10 442 aa17.73■□□□□ 0.43
SHKBP1-205ENST00000594973 SLC35F5Q8WV83 523 aa17.73■□□□□ 0.43
SHKBP1-205ENST00000594973 NCSTNQ92542 709 aa17.73■□□□□ 0.43
SHKBP1-205ENST00000594973 AZIN2Q96A70 460 aa17.73■□□□□ 0.43
SHKBP1-205ENST00000594973 PLEKHG4BQ96PX9 1271 aa17.73■□□□□ 0.43
SHKBP1-205ENST00000594973 TGS1Q96RS0 853 aaKnown RBP17.73■□□□□ 0.43
SHKBP1-205ENST00000594973 ATXN10Q9UBB4 475 aa17.73■□□□□ 0.43
SHKBP1-205ENST00000594973 CACNG4Q9UBN1 327 aa17.73■□□□□ 0.43
SHKBP1-205ENST00000594973 CDY2AQ9Y6F7 541 aa17.73■□□□□ 0.43
SHKBP1-205ENST00000594973 M0QZ92 97 aa17.72■□□□□ 0.43
SHKBP1-205ENST00000594973 XPOTO43592 962 aaKnown RBP17.72■□□□□ 0.43
SHKBP1-205ENST00000594973 TAF6P49848 677 aa17.72■□□□□ 0.43
SHKBP1-205ENST00000594973 MMRN1Q13201 1228 aa17.72■□□□□ 0.43
SHKBP1-205ENST00000594973 FOXB2Q5VYV0 432 aa17.72■□□□□ 0.43
SHKBP1-205ENST00000594973 GDF6Q6KF10 455 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-205ENST00000594973 LONP2Q86WA8 852 aa17.72■□□□□ 0.43
SHKBP1-205ENST00000594973 WNT8BQ93098 351 aa17.72■□□□□ 0.43
SHKBP1-205ENST00000594973 ZNF560Q96MR9 790 aa17.72■□□□□ 0.43
SHKBP1-205ENST00000594973 MTG1Q9BT17 334 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-205ENST00000594973 MYLK2Q9H1R3 596 aa17.72■□□□□ 0.43
SHKBP1-205ENST00000594973 NGRNQ9NPE2 291 aaKnown RBP17.72■□□□□ 0.43
SHKBP1-205ENST00000594973 NMRK1Q9NWW6 199 aa17.72■□□□□ 0.43
SHKBP1-205ENST00000594973 PAPSS1O43252 624 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-205ENST00000594973 GABBR2O75899 941 aa17.72■□□□□ 0.43
SHKBP1-205ENST00000594973 FLT3LGP49771 235 aa17.72■□□□□ 0.43
SHKBP1-205ENST00000594973 MRPS6P82932 125 aaKnown RBP17.72■□□□□ 0.43
SHKBP1-205ENST00000594973 ACAP1Q15027 740 aa17.72■□□□□ 0.43
SHKBP1-205ENST00000594973 LONRF1Q17RB8 773 aa17.72■□□□□ 0.43
SHKBP1-205ENST00000594973 CCDC14Q49A88 953 aa17.72■□□□□ 0.43
SHKBP1-205ENST00000594973 BBOF1Q8ND07 529 aa17.72■□□□□ 0.43
SHKBP1-205ENST00000594973 CMASQ8NFW8 434 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms