RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 STARD13Q9Y3M8 1113 aa11.26□□□□□ -0.61
USE1-203ENST00000593597 RAD54BQ9Y620 910 aa11.26□□□□□ -0.61
USE1-203ENST00000593597 PLXNB3Q9ULL4 1909 aa11.26□□□□□ -0.61
USE1-203ENST00000593597 ANKRD11Q6UB99 2663 aaPredicted RBP11.25□□□□□ -0.61
USE1-203ENST00000593597 PTPRBP23467 1997 aa11.25□□□□□ -0.61
USE1-203ENST00000593597 WASH3PC4AMC7 463 aa11.25□□□□□ -0.61
USE1-203ENST00000593597 CILPO75339 1184 aa11.25□□□□□ -0.61
USE1-203ENST00000593597 KLKB1P03952 638 aa11.25□□□□□ -0.61
USE1-203ENST00000593597 PROS1P07225 676 aa11.25□□□□□ -0.61
USE1-203ENST00000593597 FAM200BP0CF97 657 aa11.25□□□□□ -0.61
USE1-203ENST00000593597 HOXB2P14652 356 aa11.25□□□□□ -0.61
USE1-203ENST00000593597 TYRP14679 529 aa11.25□□□□□ -0.61
USE1-203ENST00000593597 NTSR1P30989 418 aa11.25□□□□□ -0.61
USE1-203ENST00000593597 PIK3CAP42336 1068 aa11.25□□□□□ -0.61
USE1-203ENST00000593597 MAPK8P45983 427 aa11.25□□□□□ -0.61
USE1-203ENST00000593597 FAM193AP78312 1265 aa11.25□□□□□ -0.61
USE1-203ENST00000593597 SGSM1Q2NKQ1 1148 aa11.25□□□□□ -0.61
USE1-203ENST00000593597 UAP1L1Q3KQV9 507 aa11.25□□□□□ -0.61
USE1-203ENST00000593597 ZCWPW2Q504Y3 356 aa11.25□□□□□ -0.61
USE1-203ENST00000593597 DAB2IPQ5VWQ8 1189 aa11.25□□□□□ -0.61
USE1-203ENST00000593597 LYSMD4Q5XG99 296 aa11.25□□□□□ -0.61
USE1-203ENST00000593597 CEP135Q66GS9 1140 aa11.25□□□□□ -0.61
USE1-203ENST00000593597 SLC23A3Q6PIS1 610 aa11.25□□□□□ -0.61
USE1-203ENST00000593597 UNQ6494/PRO21346Q6UXR6 183 aa11.25□□□□□ -0.61
USE1-203ENST00000593597 TPGS1Q6ZTW0 290 aa11.25□□□□□ -0.61
USE1-203ENST00000593597 BHLHA9Q7RTU4 235 aa11.25□□□□□ -0.61
USE1-203ENST00000593597 UNC93AQ86WB7 457 aa11.25□□□□□ -0.61
USE1-203ENST00000593597 SYT12Q8IV01 421 aa11.25□□□□□ -0.61
USE1-203ENST00000593597 CEP57L1Q8IYX8 460 aa11.25□□□□□ -0.61
USE1-203ENST00000593597 SPRYD3Q8NCJ5 442 aa11.25□□□□□ -0.61
USE1-203ENST00000593597 TAF4BQ92750 862 aa11.25□□□□□ -0.61
USE1-203ENST00000593597 SEMA4DQ92854 862 aa11.25□□□□□ -0.61
USE1-203ENST00000593597 GATA6Q92908 595 aa11.25□□□□□ -0.61
USE1-203ENST00000593597 GABRG3Q99928 467 aa11.25□□□□□ -0.61
USE1-203ENST00000593597 CAPN10Q9HC96 672 aa11.25□□□□□ -0.61
USE1-203ENST00000593597 PLK2Q9NYY3 685 aa11.25□□□□□ -0.61
USE1-203ENST00000593597 TRAF3IP3Q9Y228 551 aa11.25□□□□□ -0.61
USE1-203ENST00000593597 FAM237AA0A1B0GTK4 181 aa11.24□□□□□ -0.61
USE1-203ENST00000593597 STC2O76061 302 aa11.24□□□□□ -0.61
USE1-203ENST00000593597 CLSTN1O94985 981 aa11.24□□□□□ -0.61
USE1-203ENST00000593597 RPN1P04843 607 aaKnown RBP11.24□□□□□ -0.61
USE1-203ENST00000593597 RARGP13631 454 aa11.24□□□□□ -0.61
USE1-203ENST00000593597 CEACAM1P13688 526 aa11.24□□□□□ -0.61
USE1-203ENST00000593597 ACO1P21399 889 aaKnown RBP11.24□□□□□ -0.61
USE1-203ENST00000593597 GCLMP48507 274 aa11.24□□□□□ -0.61
USE1-203ENST00000593597 VAMP7P51809 220 aa11.24□□□□□ -0.61
USE1-203ENST00000593597 NDUFA8P51970 172 aa11.24□□□□□ -0.61
USE1-203ENST00000593597 KIF11P52732 1056 aa11.24□□□□□ -0.61
USE1-203ENST00000593597 MCCD1P59942 119 aaPredicted RBP11.24□□□□□ -0.61
USE1-203ENST00000593597 SEMA3BQ13214 749 aa11.24□□□□□ -0.61
USE1-203ENST00000593597 PPP1R26Q5T8A7 1209 aaPredicted RBP11.24□□□□□ -0.61
USE1-203ENST00000593597 BTBD8Q5XKL5 378 aa11.24□□□□□ -0.61
USE1-203ENST00000593597 GRAMD4Q6IC98 578 aa11.24□□□□□ -0.61
USE1-203ENST00000593597 PGBD3Q8N328 593 aa11.24□□□□□ -0.61
USE1-203ENST00000593597 RBBP8NLQ8NC74 664 aaPredicted RBP11.24□□□□□ -0.61
USE1-203ENST00000593597 IPO4Q8TEX9 1081 aaKnown RBP11.24□□□□□ -0.61
USE1-203ENST00000593597 BHMTQ93088 406 aa11.24□□□□□ -0.61
USE1-203ENST00000593597 CYFIP2Q96F07 1278 aa11.24□□□□□ -0.61
USE1-203ENST00000593597 SPACA7Q96KW9 195 aa11.24□□□□□ -0.61
USE1-203ENST00000593597 ARID3AQ99856 593 aa11.24□□□□□ -0.61
USE1-203ENST00000593597 SCNM1Q9BWG6 230 aa11.24□□□□□ -0.61
USE1-203ENST00000593597 BBS2Q9BXC9 721 aa11.24□□□□□ -0.61
USE1-203ENST00000593597 ADAM33Q9BZ11 813 aa11.24□□□□□ -0.61
USE1-203ENST00000593597 GOLPH3LQ9H4A5 285 aa11.24□□□□□ -0.61
USE1-203ENST00000593597 FBXO44Q9H4M3 255 aa11.24□□□□□ -0.61
USE1-203ENST00000593597 TLR8Q9NR97 1041 aaKnown RBP11.24□□□□□ -0.61
USE1-203ENST00000593597 CACNA2D2Q9NY47 1150 aa11.24□□□□□ -0.61
USE1-203ENST00000593597 FBXO10Q9UK96 956 aa11.24□□□□□ -0.61
USE1-203ENST00000593597 CLEC4EQ9ULY5 219 aa11.24□□□□□ -0.61
USE1-203ENST00000593597 MAPK8IP1Q9UQF2 711 aa11.24□□□□□ -0.61
USE1-203ENST00000593597 USP3Q9Y6I4 520 aa11.24□□□□□ -0.61
USE1-203ENST00000593597 CELSR3Q9NYQ7 3312 aa11.23□□□□□ -0.61
USE1-203ENST00000593597 SPAARA0A1B0GVQ0 90 aa11.23□□□□□ -0.61
USE1-203ENST00000593597 IKBKBO14920 756 aa11.23□□□□□ -0.61
USE1-203ENST00000593597 RHOBTB3O94955 611 aa11.23□□□□□ -0.61
USE1-203ENST00000593597 PENKP01210 267 aaPredicted RBP11.23□□□□□ -0.61
USE1-203ENST00000593597 PDIA4P13667 645 aaKnown RBP11.23□□□□□ -0.61
USE1-203ENST00000593597 CD58P19256 250 aa11.23□□□□□ -0.61
USE1-203ENST00000593597 CMA1P23946 247 aa11.23□□□□□ -0.61
USE1-203ENST00000593597 ATP5C1P36542 298 aaKnown RBP11.23□□□□□ -0.61
USE1-203ENST00000593597 RPL6Q02878 288 aaKnown RBP11.23□□□□□ -0.61
USE1-203ENST00000593597 ZNF33AQ06730 810 aa11.23□□□□□ -0.61
USE1-203ENST00000593597 DPYDQ12882 1025 aa11.23□□□□□ -0.61
USE1-203ENST00000593597 NFIL3Q16649 462 aa11.23□□□□□ -0.61
USE1-203ENST00000593597 GEN1Q17RS7 908 aa11.23□□□□□ -0.61
USE1-203ENST00000593597 SPDYCQ5MJ68 293 aa11.23□□□□□ -0.61
USE1-203ENST00000593597 FYB2Q5VWT5 728 aa11.23□□□□□ -0.61
USE1-203ENST00000593597 ATL3Q6DD88 541 aa11.23□□□□□ -0.61
USE1-203ENST00000593597 KLHDC10Q6PID8 442 aa11.23□□□□□ -0.61
USE1-203ENST00000593597 KCNV2Q8TDN2 545 aa11.23□□□□□ -0.61
USE1-203ENST00000593597 NIF3L1Q9GZT8 377 aa11.23□□□□□ -0.61
USE1-203ENST00000593597 NACA2Q9H009 215 aa11.23□□□□□ -0.61
USE1-203ENST00000593597 PNPLA8Q9NP80 782 aa11.23□□□□□ -0.61
USE1-203ENST00000593597 ZMIZ1Q9ULJ6 1067 aa11.23□□□□□ -0.61
USE1-203ENST00000593597 CYP8B1Q9UNU6 501 aa11.23□□□□□ -0.61
USE1-203ENST00000593597 PCDHA5Q9Y5H7 936 aa11.23□□□□□ -0.61
USE1-203ENST00000593597 PLXNA2O75051 1894 aa11.23□□□□□ -0.61
USE1-203ENST00000593597 TULP2O00295 520 aa11.22□□□□□ -0.61
USE1-203ENST00000593597 MAPK13O15264 365 aa11.22□□□□□ -0.61
USE1-203ENST00000593597 MAP3K13O43283 966 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms