RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 PPP1R26Q5T8A7 1209 aaPredicted RBP21.56■■□□□ 1.04
TRIM47-207ENST00000593089 EGFLAMQ63HQ2 1017 aa21.56■■□□□ 1.04
TRIM47-207ENST00000593089 ERLEC1Q96DZ1 483 aa21.56■■□□□ 1.04
TRIM47-207ENST00000593089 DNAI2Q9GZS0 605 aa21.56■■□□□ 1.04
TRIM47-207ENST00000593089 WDR35Q9P2L0 1181 aa21.56■■□□□ 1.04
TRIM47-207ENST00000593089 DNMT3LQ9UJW3 386 aa21.56■■□□□ 1.04
TRIM47-207ENST00000593089 ATXN2Q99700 1313 aaKnown RBP21.55■■□□□ 1.04
TRIM47-207ENST00000593089 CACNA1BQ00975 2339 aa21.55■■□□□ 1.04
TRIM47-207ENST00000593089 A0A1W2PQ27 194 aa21.55■■□□□ 1.04
TRIM47-207ENST00000593089 A0A1W2PQ64 194 aa21.55■■□□□ 1.04
TRIM47-207ENST00000593089 A0A1W2PQD8 194 aa21.55■■□□□ 1.04
TRIM47-207ENST00000593089 CACNG3O60359 315 aa21.55■■□□□ 1.04
TRIM47-207ENST00000593089 ZNF202O95125 648 aa21.55■■□□□ 1.04
TRIM47-207ENST00000593089 GABRG2P18507 467 aa21.55■■□□□ 1.04
TRIM47-207ENST00000593089 NTSR1P30989 418 aa21.55■■□□□ 1.04
TRIM47-207ENST00000593089 PLA2G4AP47712 749 aa21.55■■□□□ 1.04
TRIM47-207ENST00000593089 ENPEPQ07075 957 aa21.55■■□□□ 1.04
TRIM47-207ENST00000593089 ZCWPW2Q504Y3 356 aa21.55■■□□□ 1.04
TRIM47-207ENST00000593089 KRT39Q6A163 491 aa21.55■■□□□ 1.04
TRIM47-207ENST00000593089 TOGARAM2Q6ZUX3 1019 aa21.55■■□□□ 1.04
TRIM47-207ENST00000593089 SMYD4Q8IYR2 804 aaPredicted RBP21.55■■□□□ 1.04
TRIM47-207ENST00000593089 SEMA4DQ92854 862 aa21.55■■□□□ 1.04
TRIM47-207ENST00000593089 BHMTQ93088 406 aa21.55■■□□□ 1.04
TRIM47-207ENST00000593089 EEF2KMTQ96G04 330 aa21.55■■□□□ 1.04
TRIM47-207ENST00000593089 HEXIM2Q96MH2 286 aaKnown RBP21.55■■□□□ 1.04
TRIM47-207ENST00000593089 ACOX2Q99424 681 aa21.55■■□□□ 1.04
TRIM47-207ENST00000593089 DUSP16Q9BY84 665 aa21.55■■□□□ 1.04
TRIM47-207ENST00000593089 SCAND2PQ9GZW5 306 aaPredicted RBP21.55■■□□□ 1.04
TRIM47-207ENST00000593089 MARK1Q9P0L2 795 aa21.55■■□□□ 1.04
TRIM47-207ENST00000593089 STARD13Q9Y3M8 1113 aa21.55■■□□□ 1.04
TRIM47-207ENST00000593089 EPG5Q9HCE0 2579 aa21.55■■□□□ 1.04
TRIM47-207ENST00000593089 LAMA1P25391 3075 aa21.55■■□□□ 1.04
TRIM47-207ENST00000593089 CEP192Q8TEP8 1941 aa21.55■■□□□ 1.04
TRIM47-207ENST00000593089 CDX4O14627 284 aaPredicted RBP21.54■■□□□ 1.04
TRIM47-207ENST00000593089 GIPC1O14908 333 aa21.54■■□□□ 1.04
TRIM47-207ENST00000593089 TRIM61Q5EBN2 209 aa21.54■■□□□ 1.04
TRIM47-207ENST00000593089 LYSMD4Q5XG99 296 aa21.54■■□□□ 1.04
TRIM47-207ENST00000593089 KLHDC10Q6PID8 442 aa21.54■■□□□ 1.04
TRIM47-207ENST00000593089 CCDC186Q7Z3E2 898 aa21.54■■□□□ 1.04
TRIM47-207ENST00000593089 SCD5Q86SK9 330 aa21.54■■□□□ 1.04
TRIM47-207ENST00000593089 CHPFQ8IZ52 775 aa21.54■■□□□ 1.04
TRIM47-207ENST00000593089 DEFB119Q8N690 84 aa21.54■■□□□ 1.04
TRIM47-207ENST00000593089 GDPD2Q9HCC8 539 aa21.54■■□□□ 1.04
TRIM47-207ENST00000593089 TMEM74BQ9NUR3 256 aa21.54■■□□□ 1.04
TRIM47-207ENST00000593089 PLK2Q9NYY3 685 aa21.54■■□□□ 1.04
TRIM47-207ENST00000593089 CALCOCO1Q9P1Z2 691 aa21.54■■□□□ 1.04
TRIM47-207ENST00000593089 ATP6V1DQ9Y5K8 247 aa21.54■■□□□ 1.04
TRIM47-207ENST00000593089 PRRT4C9JH25 899 aa21.53■■□□□ 1.04
TRIM47-207ENST00000593089 RALAP11233 206 aa21.53■■□□□ 1.04
TRIM47-207ENST00000593089 GTF2H1P32780 548 aa21.53■■□□□ 1.04
TRIM47-207ENST00000593089 DGKGP49619 791 aa21.53■■□□□ 1.04
TRIM47-207ENST00000593089 PSEN1P49768 467 aa21.53■■□□□ 1.04
TRIM47-207ENST00000593089 MXI1P50539 228 aa21.53■■□□□ 1.04
TRIM47-207ENST00000593089 UAP1L1Q3KQV9 507 aa21.53■■□□□ 1.04
TRIM47-207ENST00000593089 SH3PXD2AQ5TCZ1 1133 aa21.53■■□□□ 1.04
TRIM47-207ENST00000593089 SDE2Q6IQ49 451 aa21.53■■□□□ 1.04
TRIM47-207ENST00000593089 Q6ZNB5 142 aa21.53■■□□□ 1.04
TRIM47-207ENST00000593089 TADA2BQ86TJ2 420 aa21.53■■□□□ 1.04
TRIM47-207ENST00000593089 SYT12Q8IV01 421 aa21.53■■□□□ 1.04
TRIM47-207ENST00000593089 EVLQ9UI08 416 aaPredicted RBP21.53■■□□□ 1.04
TRIM47-207ENST00000593089 RASAL2Q9UJF2 1139 aa21.53■■□□□ 1.04
TRIM47-207ENST00000593089 MAP1BP46821 2468 aaKnown RBP21.52■■□□□ 1.04
TRIM47-207ENST00000593089 A0A1W2PQF6 199 aa21.52■■□□□ 1.04
TRIM47-207ENST00000593089 STC2O76061 302 aa21.52■■□□□ 1.04
TRIM47-207ENST00000593089 HMBSP08397 361 aa21.52■■□□□ 1.04
TRIM47-207ENST00000593089 ITPKAP23677 461 aa21.52■■□□□ 1.04
TRIM47-207ENST00000593089 RPL6Q02878 288 aaKnown RBP21.52■■□□□ 1.04
TRIM47-207ENST00000593089 EDRF1Q3B7T1 1238 aa21.52■■□□□ 1.04
TRIM47-207ENST00000593089 FBXL13Q8NEE6 735 aa21.52■■□□□ 1.04
TRIM47-207ENST00000593089 ARID3AQ99856 593 aa21.52■■□□□ 1.04
TRIM47-207ENST00000593089 NUSAP1Q9BXS6 441 aaKnown RBP21.52■■□□□ 1.04
TRIM47-207ENST00000593089 CISHQ9NSE2 258 aa21.52■■□□□ 1.04
TRIM47-207ENST00000593089 RAB20Q9NX57 234 aa21.52■■□□□ 1.04
TRIM47-207ENST00000593089 RAD54BQ9Y620 910 aa21.52■■□□□ 1.04
TRIM47-207ENST00000593089 USP3Q9Y6I4 520 aa21.52■■□□□ 1.04
TRIM47-207ENST00000593089 KMT2BQ9UMN6 2715 aaPredicted RBP21.51■■□□□ 1.03
TRIM47-207ENST00000593089 ZBTB24O43167 697 aaPredicted RBP21.51■■□□□ 1.03
TRIM47-207ENST00000593089 AP5Z1O43299 807 aa21.51■■□□□ 1.03
TRIM47-207ENST00000593089 CISD3P0C7P0 127 aa21.51■■□□□ 1.03
TRIM47-207ENST00000593089 EPB41P11171 864 aaKnown RBP21.51■■□□□ 1.03
TRIM47-207ENST00000593089 MAPK8P45983 427 aa21.51■■□□□ 1.03
TRIM47-207ENST00000593089 SHC2P98077 582 aa21.51■■□□□ 1.03
TRIM47-207ENST00000593089 EFEMP1Q12805 493 aa21.51■■□□□ 1.03
TRIM47-207ENST00000593089 LMAN2Q12907 356 aa21.51■■□□□ 1.03
TRIM47-207ENST00000593089 PNOCQ13519 176 aa21.51■■□□□ 1.03
TRIM47-207ENST00000593089 SPDYCQ5MJ68 293 aa21.51■■□□□ 1.03
TRIM47-207ENST00000593089 KIAA1211LQ6NV74 962 aa21.51■■□□□ 1.03
TRIM47-207ENST00000593089 SLC4A11Q8NBS3 891 aa21.51■■□□□ 1.03
TRIM47-207ENST00000593089 IPO4Q8TEX9 1081 aaKnown RBP21.51■■□□□ 1.03
TRIM47-207ENST00000593089 TATDN2Q93075 761 aa21.51■■□□□ 1.03
TRIM47-207ENST00000593089 TMEM176AQ96HP8 235 aa21.51■■□□□ 1.03
TRIM47-207ENST00000593089 CLIC5Q9NZA1 410 aa21.51■■□□□ 1.03
TRIM47-207ENST00000593089 CHD8Q9HCK8 2581 aa21.51■■□□□ 1.03
TRIM47-207ENST00000593089 CETN3O15182 167 aa21.5■■□□□ 1.03
TRIM47-207ENST00000593089 STX10O60499 249 aa21.5■■□□□ 1.03
TRIM47-207ENST00000593089 KLKB1P03952 638 aa21.5■■□□□ 1.03
TRIM47-207ENST00000593089 NDUFV2P19404 249 aa21.5■■□□□ 1.03
TRIM47-207ENST00000593089 DPP6P42658 865 aa21.5■■□□□ 1.03
TRIM47-207ENST00000593089 RAD23BP54727 409 aa21.5■■□□□ 1.03
TRIM47-207ENST00000593089 ZNF252P-AS1Q0IIN9 211 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms