RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 FILIP1LQ4L180 1135 aa16.04■□□□□ 0.16
TRIM47-206ENST00000592942 TAF3Q5VWG9 929 aa16.04■□□□□ 0.16
TRIM47-206ENST00000592942 BTBD8Q5XKL5 378 aa16.04■□□□□ 0.16
TRIM47-206ENST00000592942 NAIF1Q69YI7 327 aaPredicted RBP16.04■□□□□ 0.16
TRIM47-206ENST00000592942 RHBDF2Q6PJF5 856 aa16.04■□□□□ 0.16
TRIM47-206ENST00000592942 Q6ZNB5 142 aa16.04■□□□□ 0.16
TRIM47-206ENST00000592942 RALGPS2Q86X27 583 aaPredicted RBP16.04■□□□□ 0.16
TRIM47-206ENST00000592942 BBS7Q8IWZ6 715 aa16.04■□□□□ 0.16
TRIM47-206ENST00000592942 C1orf131Q8NDD1 294 aaKnown RBP16.04■□□□□ 0.16
TRIM47-206ENST00000592942 SLC20A1Q8WUM9 679 aa16.04■□□□□ 0.16
TRIM47-206ENST00000592942 CLDN23Q96B33 292 aa16.04■□□□□ 0.16
TRIM47-206ENST00000592942 PIWIL1Q96J94 861 aaKnown RBP16.04■□□□□ 0.16
TRIM47-206ENST00000592942 PPP1R13BQ96KQ4 1090 aa16.04■□□□□ 0.16
TRIM47-206ENST00000592942 NELL2Q99435 816 aa16.04■□□□□ 0.16
TRIM47-206ENST00000592942 ANP32EQ9BTT0 268 aa16.04■□□□□ 0.16
TRIM47-206ENST00000592942 NACA2Q9H009 215 aa16.04■□□□□ 0.16
TRIM47-206ENST00000592942 ABCC13Q9NSE7 274 aa16.04■□□□□ 0.16
TRIM47-206ENST00000592942 KMT2EQ8IZD2 1858 aa16.03■□□□□ 0.16
TRIM47-206ENST00000592942 MYOFQ9NZM1 2061 aa16.03■□□□□ 0.16
TRIM47-206ENST00000592942 SERPINC1P01008 464 aa16.03■□□□□ 0.16
TRIM47-206ENST00000592942 LTFP02788 710 aa16.03■□□□□ 0.16
TRIM47-206ENST00000592942 IRF1P10914 325 aa16.03■□□□□ 0.16
TRIM47-206ENST00000592942 CHRNB1P11230 501 aa16.03■□□□□ 0.16
TRIM47-206ENST00000592942 ZNF445P59923 1031 aa16.03■□□□□ 0.16
TRIM47-206ENST00000592942 DHCR24Q15392 516 aa16.03■□□□□ 0.16
TRIM47-206ENST00000592942 TAF5Q15542 800 aa16.03■□□□□ 0.16
TRIM47-206ENST00000592942 PTPN20Q4JDL3 420 aa16.03■□□□□ 0.16
TRIM47-206ENST00000592942 MSANTD2Q6P1R3 559 aa16.03■□□□□ 0.16
TRIM47-206ENST00000592942 IRF2BP2Q7Z5L9 587 aa16.03■□□□□ 0.16
TRIM47-206ENST00000592942 TADA2BQ86TJ2 420 aa16.03■□□□□ 0.16
TRIM47-206ENST00000592942 MIB1Q86YT6 1006 aa16.03■□□□□ 0.16
TRIM47-206ENST00000592942 ATP2A3Q93084 1043 aa16.03■□□□□ 0.16
TRIM47-206ENST00000592942 P2RY11Q96G91 374 aa16.03■□□□□ 0.16
TRIM47-206ENST00000592942 CDK5RAP1Q96SZ6 601 aaKnown RBP16.03■□□□□ 0.16
TRIM47-206ENST00000592942 TTYH3Q9C0H2 523 aa16.03■□□□□ 0.16
TRIM47-206ENST00000592942 TSPY26PQ9H489 355 aa16.03■□□□□ 0.16
TRIM47-206ENST00000592942 MARCH2Q9P0N8 246 aa16.03■□□□□ 0.16
TRIM47-206ENST00000592942 TBC1D14Q9P2M4 693 aa16.03■□□□□ 0.16
TRIM47-206ENST00000592942 SFMBT1Q9UHJ3 866 aa16.03■□□□□ 0.16
TRIM47-206ENST00000592942 TRDMT1O14717 391 aaKnown RBP16.02■□□□□ 0.16
TRIM47-206ENST00000592942 SLC9A3R1O14745 358 aaPredicted RBP16.02■□□□□ 0.16
TRIM47-206ENST00000592942 ERBB2P04626 1255 aa16.02■□□□□ 0.16
TRIM47-206ENST00000592942 GABRB2P47870 512 aa16.02■□□□□ 0.16
TRIM47-206ENST00000592942 MRE11P49959 708 aa16.02■□□□□ 0.16
TRIM47-206ENST00000592942 GALK1P51570 392 aa16.02■□□□□ 0.16
TRIM47-206ENST00000592942 UBASH3AP57075 661 aa16.02■□□□□ 0.16
TRIM47-206ENST00000592942 COG7P83436 770 aa16.02■□□□□ 0.16
TRIM47-206ENST00000592942 FMO1Q01740 532 aa16.02■□□□□ 0.16
TRIM47-206ENST00000592942 UBXN2BQ14CS0 331 aa16.02■□□□□ 0.16
TRIM47-206ENST00000592942 SYPL2Q5VXT5 272 aa16.02■□□□□ 0.16
TRIM47-206ENST00000592942 BEND5Q7L4P6 421 aa16.02■□□□□ 0.16
TRIM47-206ENST00000592942 FMNL3Q8IVF7 1028 aa16.02■□□□□ 0.16
TRIM47-206ENST00000592942 OLIG1Q8TAK6 271 aa16.02■□□□□ 0.16
TRIM47-206ENST00000592942 MSANTD3Q96H12 275 aa16.02■□□□□ 0.16
TRIM47-206ENST00000592942 SPAG5Q96R06 1193 aa16.02■□□□□ 0.16
TRIM47-206ENST00000592942 PCDHB18PQ96TA0 734 aa16.02■□□□□ 0.16
TRIM47-206ENST00000592942 RASAL2Q9UJF2 1139 aa16.02■□□□□ 0.16
TRIM47-206ENST00000592942 NAALADL1Q9UQQ1 740 aa16.02■□□□□ 0.16
TRIM47-206ENST00000592942 SH3BP1Q9Y3L3 701 aa16.02■□□□□ 0.16
TRIM47-206ENST00000592942 SLC12A8A0AV02 714 aa16.01■□□□□ 0.15
TRIM47-206ENST00000592942 GOLGA6L19H0YKK7 550 aa16.01■□□□□ 0.15
TRIM47-206ENST00000592942 CYP1A1P04798 512 aaPredicted RBP16.01■□□□□ 0.15
TRIM47-206ENST00000592942 CYP17A1P05093 508 aa16.01■□□□□ 0.15
TRIM47-206ENST00000592942 CDR2Q01850 454 aa16.01■□□□□ 0.15
TRIM47-206ENST00000592942 EIF4EBP2Q13542 120 aaPredicted RBP16.01■□□□□ 0.15
TRIM47-206ENST00000592942 PON2Q15165 354 aa16.01■□□□□ 0.15
TRIM47-206ENST00000592942 TRIP4Q15650 581 aaPredicted RBP16.01■□□□□ 0.15
TRIM47-206ENST00000592942 TMEM196Q5HYL7 178 aa16.01■□□□□ 0.15
TRIM47-206ENST00000592942 ZNF677Q86XU0 584 aa16.01■□□□□ 0.15
TRIM47-206ENST00000592942 TMEM25Q86YD3 366 aa16.01■□□□□ 0.15
TRIM47-206ENST00000592942 CPA6Q8N4T0 437 aa16.01■□□□□ 0.15
TRIM47-206ENST00000592942 TMEM35BQ8NCS4 154 aa16.01■□□□□ 0.15
TRIM47-206ENST00000592942 EZH1Q92800 747 aaPredicted RBP16.01■□□□□ 0.15
TRIM47-206ENST00000592942 OTUB2Q96DC9 234 aa16.01■□□□□ 0.15
TRIM47-206ENST00000592942 SYT11Q9BT88 431 aa16.01■□□□□ 0.15
TRIM47-206ENST00000592942 LMAN1LQ9HAT1 526 aa16.01■□□□□ 0.15
TRIM47-206ENST00000592942 OLA1Q9NTK5 396 aaKnown RBP16.01■□□□□ 0.15
TRIM47-206ENST00000592942 NDRG2Q9UN36 371 aaKnown RBP16.01■□□□□ 0.15
TRIM47-206ENST00000592942 MRPS17Q9Y2R5 130 aaKnown RBP16.01■□□□□ 0.15
TRIM47-206ENST00000592942 NFATC1O95644 943 aa16■□□□□ 0.15
TRIM47-206ENST00000592942 HMBSP08397 361 aa16■□□□□ 0.15
TRIM47-206ENST00000592942 UNGP13051 313 aaPredicted RBP16■□□□□ 0.15
TRIM47-206ENST00000592942 OPRD1P41143 372 aa16■□□□□ 0.15
TRIM47-206ENST00000592942 YWHAZP63104 245 aaKnown RBP16■□□□□ 0.15
TRIM47-206ENST00000592942 TPM4P67936 248 aa16■□□□□ 0.15
TRIM47-206ENST00000592942 NOMO3P69849 1222 aa16■□□□□ 0.15
TRIM47-206ENST00000592942 CCINQ13939 588 aa16■□□□□ 0.15
TRIM47-206ENST00000592942 GAS6Q14393 721 aa16■□□□□ 0.15
TRIM47-206ENST00000592942 LY6G5CQ5SRR4 150 aa16■□□□□ 0.15
TRIM47-206ENST00000592942 FSTL4Q6MZW2 842 aa16■□□□□ 0.15
TRIM47-206ENST00000592942 C1orf228Q6PIY5 440 aa16■□□□□ 0.15
TRIM47-206ENST00000592942 OLFML1Q6UWY5 402 aa16■□□□□ 0.15
TRIM47-206ENST00000592942 FAM183BPQ6ZVS7 135 aa16■□□□□ 0.15
TRIM47-206ENST00000592942 RSRC2Q7L4I2 434 aaKnown RBP16■□□□□ 0.15
TRIM47-206ENST00000592942 DTWD2Q8NBA8 298 aa16■□□□□ 0.15
TRIM47-206ENST00000592942 RNF139Q8WU17 664 aa16■□□□□ 0.15
TRIM47-206ENST00000592942 CPA5Q8WXQ8 436 aa16■□□□□ 0.15
TRIM47-206ENST00000592942 SPHK2Q9NRA0 654 aa16■□□□□ 0.15
TRIM47-206ENST00000592942 IFNKQ9P0W0 207 aa16■□□□□ 0.15
TRIM47-206ENST00000592942 AGO1Q9UL18 857 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms