RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 APPL2Q8NEU8 664 aa17.21■□□□□ 0.35
PRKCSH-217ENST00000592741 TCP10LQ8TDR4 215 aa17.21■□□□□ 0.35
PRKCSH-217ENST00000592741 ZNF75CPQ92670 426 aaPredicted RBP17.21■□□□□ 0.35
PRKCSH-217ENST00000592741 HSFY1Q96LI6 401 aa17.21■□□□□ 0.35
PRKCSH-217ENST00000592741 SLCO1B3Q9NPD5 702 aa17.21■□□□□ 0.35
PRKCSH-217ENST00000592741 AVILO75366 819 aa17.2■□□□□ 0.34
PRKCSH-217ENST00000592741 NQO1P15559 274 aaKnown RBP17.2■□□□□ 0.34
PRKCSH-217ENST00000592741 NR2C2P49116 596 aa17.2■□□□□ 0.34
PRKCSH-217ENST00000592741 PSEN2P49810 448 aa17.2■□□□□ 0.34
PRKCSH-217ENST00000592741 SLC45A4Q5BKX6 768 aa17.2■□□□□ 0.34
PRKCSH-217ENST00000592741 PRAMEF19Q5SWL8 479 aa17.2■□□□□ 0.34
PRKCSH-217ENST00000592741 FAXCQ5TGI0 409 aa17.2■□□□□ 0.34
PRKCSH-217ENST00000592741 CCDC110Q8TBZ0 833 aa17.2■□□□□ 0.34
PRKCSH-217ENST00000592741 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.2■□□□□ 0.34
PRKCSH-217ENST00000592741 GOLGA8RI6L899 631 aa17.2■□□□□ 0.34
PRKCSH-217ENST00000592741 SPTLC1O15269 473 aa17.2■□□□□ 0.34
PRKCSH-217ENST00000592741 APRTP07741 180 aa17.2■□□□□ 0.34
PRKCSH-217ENST00000592741 ADRA1DP25100 572 aa17.2■□□□□ 0.34
PRKCSH-217ENST00000592741 LMO2P25791 158 aa17.2■□□□□ 0.34
PRKCSH-217ENST00000592741 IRF5Q13568 498 aa17.2■□□□□ 0.34
PRKCSH-217ENST00000592741 XKR4Q5GH76 650 aa17.2■□□□□ 0.34
PRKCSH-217ENST00000592741 SPRYD7Q5W111 196 aa17.2■□□□□ 0.34
PRKCSH-217ENST00000592741 MCUQ8NE86 351 aa17.2■□□□□ 0.34
PRKCSH-217ENST00000592741 SLC2A14Q8TDB8 520 aa17.2■□□□□ 0.34
PRKCSH-217ENST00000592741 KLHL29Q96CT2 875 aa17.2■□□□□ 0.34
PRKCSH-217ENST00000592741 TNIP3Q96KP6 325 aa17.2■□□□□ 0.34
PRKCSH-217ENST00000592741 KCTD15Q96SI1 283 aaPredicted RBP17.2■□□□□ 0.34
PRKCSH-217ENST00000592741 ETNK1Q9HBU6 452 aa17.2■□□□□ 0.34
PRKCSH-217ENST00000592741 ZC3H7BQ9UGR2 993 aaKnown RBP17.2■□□□□ 0.34
PRKCSH-217ENST00000592741 LPXNO60711 386 aa17.19■□□□□ 0.34
PRKCSH-217ENST00000592741 HUS1O60921 280 aa17.19■□□□□ 0.34
PRKCSH-217ENST00000592741 CAPN15O75808 1086 aa17.19■□□□□ 0.34
PRKCSH-217ENST00000592741 ALDH3A1P30838 453 aa17.19■□□□□ 0.34
PRKCSH-217ENST00000592741 SKIV2L2P42285 1042 aaKnown RBP17.19■□□□□ 0.34
PRKCSH-217ENST00000592741 ATXN1P54253 815 aaKnown RBP17.19■□□□□ 0.34
PRKCSH-217ENST00000592741 EFHC1Q5JVL4 640 aa17.19■□□□□ 0.34
PRKCSH-217ENST00000592741 FYB2Q5VWT5 728 aa17.19■□□□□ 0.34
PRKCSH-217ENST00000592741 STRADAQ7RTN6 431 aa17.19■□□□□ 0.34
PRKCSH-217ENST00000592741 ADGRF2Q8IZF7 708 aa17.19■□□□□ 0.34
PRKCSH-217ENST00000592741 VPS52Q8N1B4 723 aa17.19■□□□□ 0.34
PRKCSH-217ENST00000592741 TMEM40Q8WWA1 233 aa17.19■□□□□ 0.34
PRKCSH-217ENST00000592741 LRRC39Q96DD0 335 aa17.19■□□□□ 0.34
PRKCSH-217ENST00000592741 THOC1Q96FV9 657 aaKnown RBP17.19■□□□□ 0.34
PRKCSH-217ENST00000592741 QKIQ96PU8 341 aaKnown RBP eCLIP17.19■□□□□ 0.34
PRKCSH-217ENST00000592741 KLF6Q99612 283 aaPredicted RBP17.19■□□□□ 0.34
PRKCSH-217ENST00000592741 POPDC2Q9HBU9 364 aa17.19■□□□□ 0.34
PRKCSH-217ENST00000592741 TTLL3Q9Y4R7 772 aa17.19■□□□□ 0.34
PRKCSH-217ENST00000592741 GCATO75600 419 aa17.18■□□□□ 0.34
PRKCSH-217ENST00000592741 DCTN3O75935 186 aa17.18■□□□□ 0.34
PRKCSH-217ENST00000592741 ADAM17P78536 824 aa17.18■□□□□ 0.34
PRKCSH-217ENST00000592741 GBE1Q04446 702 aa17.18■□□□□ 0.34
PRKCSH-217ENST00000592741 FAAP100Q0VG06 881 aa17.18■□□□□ 0.34
PRKCSH-217ENST00000592741 HIC1Q14526 733 aa17.18■□□□□ 0.34
PRKCSH-217ENST00000592741 UBXN11Q5T124 520 aa17.18■□□□□ 0.34
PRKCSH-217ENST00000592741 ZNF618Q5T7W0 954 aa17.18■□□□□ 0.34
PRKCSH-217ENST00000592741 CAND1Q86VP6 1230 aaKnown RBP17.18■□□□□ 0.34
PRKCSH-217ENST00000592741 SLC26A11Q86WA9 606 aa17.18■□□□□ 0.34
PRKCSH-217ENST00000592741 AGGF1Q8N302 714 aaeCLIP17.18■□□□□ 0.34
PRKCSH-217ENST00000592741 APOPT1Q96IL0 206 aa17.18■□□□□ 0.34
PRKCSH-217ENST00000592741 CSPG4P5Q96PW8 444 aa17.18■□□□□ 0.34
PRKCSH-217ENST00000592741 PTPN18Q99952 460 aa17.18■□□□□ 0.34
PRKCSH-217ENST00000592741 VPS11Q9H270 941 aa17.18■□□□□ 0.34
PRKCSH-217ENST00000592741 CD248Q9HCU0 757 aa17.18■□□□□ 0.34
PRKCSH-217ENST00000592741 TXLNGQ9NUQ3 528 aa17.18■□□□□ 0.34
PRKCSH-217ENST00000592741 SRCAPQ6ZRS2 3230 aa17.18■□□□□ 0.34
PRKCSH-217ENST00000592741 IGF2BP3O00425 579 aaKnown RBP eCLIP17.18■□□□□ 0.34
PRKCSH-217ENST00000592741 TRDMT1O14717 391 aaKnown RBP17.18■□□□□ 0.34
PRKCSH-217ENST00000592741 HGSO14964 777 aaPredicted RBP17.18■□□□□ 0.34
PRKCSH-217ENST00000592741 XPO1O14980 1071 aaKnown RBP17.18■□□□□ 0.34
PRKCSH-217ENST00000592741 ATP6V1G2O95670 118 aa17.18■□□□□ 0.34
PRKCSH-217ENST00000592741 GSTA2P09210 222 aa17.18■□□□□ 0.34
PRKCSH-217ENST00000592741 SLC18A2Q05940 514 aa17.18■□□□□ 0.34
PRKCSH-217ENST00000592741 SWT1Q5T5J6 900 aaKnown RBP17.18■□□□□ 0.34
PRKCSH-217ENST00000592741 TTC39BQ5VTQ0 682 aaPredicted RBP17.18■□□□□ 0.34
PRKCSH-217ENST00000592741 OTOAQ7RTW8 1153 aa17.18■□□□□ 0.34
PRKCSH-217ENST00000592741 LIMS2Q7Z4I7 341 aa17.18■□□□□ 0.34
PRKCSH-217ENST00000592741 CCDC185Q8N715 623 aa17.18■□□□□ 0.34
PRKCSH-217ENST00000592741 MAGEC3Q8TD91 643 aa17.18■□□□□ 0.34
PRKCSH-217ENST00000592741 RNF39Q9H2S5 420 aa17.18■□□□□ 0.34
PRKCSH-217ENST00000592741 MTMR10Q9NXD2 777 aa17.18■□□□□ 0.34
PRKCSH-217ENST00000592741 SLC17A7Q9P2U7 560 aa17.18■□□□□ 0.34
PRKCSH-217ENST00000592741 WDR91A4D1P6 747 aa17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 HAS3O00219 553 aa17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 TREHO43280 583 aa17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 MYL3P08590 195 aa17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 CCNB1P14635 433 aa17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 TPSB2P20231 275 aa17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 WARSP23381 471 aaKnown RBP17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 CPT1AP50416 773 aa17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 SLC8A3P57103 927 aa17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 KCNJ2P63252 427 aa17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 SOX4Q06945 474 aaPredicted RBP17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 MAP2K5Q13163 448 aa17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 TPSAB1Q15661 275 aa17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 MORN1Q5T089 497 aa17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 FAM182AQ5T1J6 154 aa17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 OLFML2BQ68BL8 750 aa17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 KCNT2Q6UVM3 1135 aa17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 CTAGE3PQ8IX95 158 aa17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 TOP6BLQ8N6T0 577 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms