RNA–Protein interactions for RNA: ENST00000592133.5

RANBP3-225, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-225ENST00000592133 SCARA3Q6AZY7 606 aa12.85□□□□□ -0.35
RANBP3-225ENST00000592133 LAYNQ6UX15 382 aa12.85□□□□□ -0.35
RANBP3-225ENST00000592133 PRICKLE2Q7Z3G6 844 aa12.85□□□□□ -0.35
RANBP3-225ENST00000592133 GATAD2AQ86YP4 633 aa12.85□□□□□ -0.35
RANBP3-225ENST00000592133 MYCBPAPQ8TBZ2 947 aa12.85□□□□□ -0.35
RANBP3-225ENST00000592133 BHMTQ93088 406 aa12.85□□□□□ -0.35
RANBP3-225ENST00000592133 WBP2Q969T9 261 aa12.85□□□□□ -0.35
RANBP3-225ENST00000592133 DUSP9Q99956 384 aaKnown RBP12.85□□□□□ -0.35
RANBP3-225ENST00000592133 FAM213AQ9BRX8 229 aa12.85□□□□□ -0.35
RANBP3-225ENST00000592133 PCED1AQ9H1Q7 454 aa12.85□□□□□ -0.35
RANBP3-225ENST00000592133 CCSER2Q9H7U1 834 aa12.85□□□□□ -0.35
RANBP3-225ENST00000592133 CPNE5Q9HCH3 593 aa12.85□□□□□ -0.35
RANBP3-225ENST00000592133 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.85□□□□□ -0.351e-6■■■■■ 147
RANBP3-225ENST00000592133 MYH11P35749 1972 aa12.85□□□□□ -0.35
RANBP3-225ENST00000592133 KNTC1P50748 2209 aa12.84□□□□□ -0.35
RANBP3-225ENST00000592133 RTN3O95197 1032 aaPredicted RBP12.84□□□□□ -0.35
RANBP3-225ENST00000592133 IGLV3-19P01714 112 aa12.84□□□□□ -0.35
RANBP3-225ENST00000592133 NTRK1P04629 796 aa12.84□□□□□ -0.35
RANBP3-225ENST00000592133 CISD3P0C7P0 127 aa12.84□□□□□ -0.35
RANBP3-225ENST00000592133 PRPHP41219 470 aa12.84□□□□□ -0.35
RANBP3-225ENST00000592133 UCNP55089 124 aa12.84□□□□□ -0.35
RANBP3-225ENST00000592133 WNT7BP56706 349 aa12.84□□□□□ -0.35
RANBP3-225ENST00000592133 C21orf59P57076 290 aa12.84□□□□□ -0.35
RANBP3-225ENST00000592133 TBC1D25Q3MII6 688 aa12.84□□□□□ -0.35
RANBP3-225ENST00000592133 CENPQQ7L2Z9 268 aaPredicted RBP12.84□□□□□ -0.35
RANBP3-225ENST00000592133 ERICH1Q86X53 443 aa12.84□□□□□ -0.35
RANBP3-225ENST00000592133 NUP93Q8N1F7 819 aa12.84□□□□□ -0.35
RANBP3-225ENST00000592133 ZNF248Q8NDW4 579 aa12.84□□□□□ -0.35
RANBP3-225ENST00000592133 UCMAQ8WVF2 138 aa12.84□□□□□ -0.35
RANBP3-225ENST00000592133 KBTBD7Q8WVZ9 684 aa12.84□□□□□ -0.35
RANBP3-225ENST00000592133 OVCA2Q8WZ82 227 aa12.84□□□□□ -0.35
RANBP3-225ENST00000592133 FAM84AQ96KN4 292 aa12.84□□□□□ -0.35
RANBP3-225ENST00000592133 MMS19Q96T76 1030 aa12.84□□□□□ -0.35
RANBP3-225ENST00000592133 TRIM9Q9C026 710 aa12.84□□□□□ -0.35
RANBP3-225ENST00000592133 C6orf106Q9H6K1 298 aaPredicted RBP12.84□□□□□ -0.35
RANBP3-225ENST00000592133 OSGEPQ9NPF4 335 aa12.84□□□□□ -0.35
RANBP3-225ENST00000592133 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.84□□□□□ -0.35
RANBP3-225ENST00000592133 NPC1O15118 1278 aa12.83□□□□□ -0.36
RANBP3-225ENST00000592133 TBCAO75347 108 aaKnown RBP12.83□□□□□ -0.36
RANBP3-225ENST00000592133 FSBPO95073 299 aa12.83□□□□□ -0.36
RANBP3-225ENST00000592133 ITGAVP06756 1048 aa12.83□□□□□ -0.36
RANBP3-225ENST00000592133 TMEM191BP0C7N4 346 aa12.83□□□□□ -0.36
RANBP3-225ENST00000592133 ABCB4P21439 1286 aa12.83□□□□□ -0.36
RANBP3-225ENST00000592133 GLDCP23378 1020 aa12.83□□□□□ -0.36
RANBP3-225ENST00000592133 CTSKP43235 329 aa12.83□□□□□ -0.36
RANBP3-225ENST00000592133 ZNF131P52739 623 aa12.83□□□□□ -0.36
RANBP3-225ENST00000592133 CACNA2D1P54289 1103 aa12.83□□□□□ -0.36
RANBP3-225ENST00000592133 CDH8P55286 799 aa12.83□□□□□ -0.36
RANBP3-225ENST00000592133 KCNT1Q5JUK3 1230 aa12.83□□□□□ -0.36
RANBP3-225ENST00000592133 FBXL19Q6PCT2 694 aa12.83□□□□□ -0.36
RANBP3-225ENST00000592133 HTR3DQ70Z44 454 aa12.83□□□□□ -0.36
RANBP3-225ENST00000592133 CXorf38Q8TB03 319 aa12.83□□□□□ -0.36
RANBP3-225ENST00000592133 NOC3LQ8WTT2 800 aaKnown RBP12.83□□□□□ -0.36
RANBP3-225ENST00000592133 MED8Q96G25 268 aa12.83□□□□□ -0.36
RANBP3-225ENST00000592133 HPDLQ96IR7 371 aa12.83□□□□□ -0.36
RANBP3-225ENST00000592133 IKZF4Q9H2S9 585 aa12.83□□□□□ -0.36
RANBP3-225ENST00000592133 SNX25Q9H3E2 840 aa12.83□□□□□ -0.36
RANBP3-225ENST00000592133 RBAKQ9NYW8 714 aaPredicted RBP12.83□□□□□ -0.36
RANBP3-225ENST00000592133 PLK2Q9NYY3 685 aa12.83□□□□□ -0.36
RANBP3-225ENST00000592133 MARK1Q9P0L2 795 aa12.83□□□□□ -0.36
RANBP3-225ENST00000592133 THAP10Q9P2Z0 257 aaPredicted RBP12.83□□□□□ -0.36
RANBP3-225ENST00000592133 IL17BQ9UHF5 180 aa12.83□□□□□ -0.36
RANBP3-225ENST00000592133 LSM7Q9UK45 103 aaKnown RBP12.83□□□□□ -0.36
RANBP3-225ENST00000592133 PTPRJQ12913 1337 aa12.83□□□□□ -0.36
RANBP3-225ENST00000592133 COL6A6A6NMZ7 2263 aa12.82□□□□□ -0.36
RANBP3-225ENST00000592133 A0A1B0GTQ1 180 aa12.82□□□□□ -0.36
RANBP3-225ENST00000592133 PAPSS1O43252 624 aaPredicted RBP12.82□□□□□ -0.36
RANBP3-225ENST00000592133 KRT10P13645 584 aa12.82□□□□□ -0.36
RANBP3-225ENST00000592133 WARSP23381 471 aaKnown RBP12.82□□□□□ -0.36
RANBP3-225ENST00000592133 ADSSP30520 456 aa12.82□□□□□ -0.36
RANBP3-225ENST00000592133 ACSL1P33121 698 aa12.82□□□□□ -0.36
RANBP3-225ENST00000592133 GNL1P36915 607 aaPredicted RBP12.82□□□□□ -0.36
RANBP3-225ENST00000592133 ACADVLP49748 655 aa12.82□□□□□ -0.36
RANBP3-225ENST00000592133 TOB1P50616 345 aaPredicted RBP12.82□□□□□ -0.36
RANBP3-225ENST00000592133 PCBP4P57723 403 aaKnown RBP12.82□□□□□ -0.36
RANBP3-225ENST00000592133 PRAMEF14Q5SWL7 426 aa12.82□□□□□ -0.36
RANBP3-225ENST00000592133 BRSK2Q8IWQ3 736 aa12.82□□□□□ -0.36
RANBP3-225ENST00000592133 EID2Q8N6I1 236 aa12.82□□□□□ -0.36
RANBP3-225ENST00000592133 SAAL1Q96ER3 474 aa12.82□□□□□ -0.36
RANBP3-225ENST00000592133 ZNF518BQ9C0D4 1074 aa12.82□□□□□ -0.36
RANBP3-225ENST00000592133 MTMR12Q9C0I1 747 aa12.82□□□□□ -0.36
RANBP3-225ENST00000592133 ELOVL4Q9GZR5 314 aa12.82□□□□□ -0.36
RANBP3-225ENST00000592133 NXF1Q9UBU9 619 aaKnown RBP12.82□□□□□ -0.36
RANBP3-225ENST00000592133 SIX4Q9UIU6 781 aa12.82□□□□□ -0.36
RANBP3-225ENST00000592133 CLCA2Q9UQC9 943 aa12.82□□□□□ -0.36
RANBP3-225ENST00000592133 HEMK1Q9Y5R4 338 aaPredicted RBP12.82□□□□□ -0.36
RANBP3-225ENST00000592133 CABIN1Q9Y6J0 2220 aa12.81□□□□□ -0.36
RANBP3-225ENST00000592133 CLDN5O00501 218 aa12.81□□□□□ -0.36
RANBP3-225ENST00000592133 LDHAP00338 332 aaKnown RBP12.81□□□□□ -0.36
RANBP3-225ENST00000592133 EPHX1P07099 455 aa12.81□□□□□ -0.36
RANBP3-225ENST00000592133 PTPN1P18031 435 aaKnown RBP12.81□□□□□ -0.36
RANBP3-225ENST00000592133 CD27P26842 260 aa12.81□□□□□ -0.36
RANBP3-225ENST00000592133 TUBP50607 506 aa12.81□□□□□ -0.36
RANBP3-225ENST00000592133 COPAP53621 1224 aa12.81□□□□□ -0.36
RANBP3-225ENST00000592133 GOLGA8FQ08AF8 430 aa12.81□□□□□ -0.36
RANBP3-225ENST00000592133 GOLGA8DPQ0D2H9 430 aa12.81□□□□□ -0.36
RANBP3-225ENST00000592133 E2F5Q15329 346 aa12.81□□□□□ -0.36
RANBP3-225ENST00000592133 TMEM119Q4V9L6 283 aa12.81□□□□□ -0.36
RANBP3-225ENST00000592133 COLEC12Q5KU26 742 aa12.81□□□□□ -0.36
RANBP3-225ENST00000592133 SNX30Q5VWJ9 437 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms