RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 RAB30Q15771 203 aa4.04□□□□□ -1.76
VMP1-212ENST00000591782 MAPKAPK3Q16644 382 aa4.04□□□□□ -1.76
VMP1-212ENST00000591782 ST3GAL2Q16842 350 aa4.04□□□□□ -1.76
VMP1-212ENST00000591782 HSP90AB3PQ58FF7 597 aa4.04□□□□□ -1.76
VMP1-212ENST00000591782 GRHL2Q6ISB3 625 aa4.04□□□□□ -1.76
VMP1-212ENST00000591782 FAM43BQ6ZT52 329 aaPredicted RBP4.04□□□□□ -1.76
VMP1-212ENST00000591782 KRT73Q86Y46 540 aa4.04□□□□□ -1.76
VMP1-212ENST00000591782 SFTPA1Q8IWL2 248 aa4.04□□□□□ -1.76
VMP1-212ENST00000591782 DNAJC10Q8IXB1 793 aa4.04□□□□□ -1.76
VMP1-212ENST00000591782 SPICE1Q8N0Z3 855 aa4.04□□□□□ -1.76
VMP1-212ENST00000591782 TMTC2Q8N394 836 aa4.04□□□□□ -1.76
VMP1-212ENST00000591782 TERB1Q8NA31 727 aa4.04□□□□□ -1.76
VMP1-212ENST00000591782 ABHD5Q8WTS1 349 aa4.04□□□□□ -1.76
VMP1-212ENST00000591782 MUL1Q969V5 352 aa4.04□□□□□ -1.76
VMP1-212ENST00000591782 GRAMD1AQ96CP6 724 aa4.04□□□□□ -1.76
VMP1-212ENST00000591782 WDR24Q96S15 920 aa4.04□□□□□ -1.76
VMP1-212ENST00000591782 PLCB1Q9NQ66 1216 aa4.04□□□□□ -1.76
VMP1-212ENST00000591782 TM7SF3Q9NS93 570 aa4.04□□□□□ -1.76
VMP1-212ENST00000591782 MGAT4CQ9UBM8 478 aa4.04□□□□□ -1.76
VMP1-212ENST00000591782 COX11Q9Y6N1 276 aa4.04□□□□□ -1.76
VMP1-212ENST00000591782 AOX1Q06278 1338 aa4.03□□□□□ -1.76
VMP1-212ENST00000591782 OR2W5A6NFC9 320 aa4.03□□□□□ -1.76
VMP1-212ENST00000591782 SMIM22K7EJ46 135 aa4.03□□□□□ -1.76
VMP1-212ENST00000591782 ADAMTS3O15072 1205 aa4.03□□□□□ -1.76
VMP1-212ENST00000591782 ZSCAN9O15535 394 aaPredicted RBP4.03□□□□□ -1.76
VMP1-212ENST00000591782 SUV39H1O43463 412 aa4.03□□□□□ -1.76
VMP1-212ENST00000591782 CA12O43570 354 aa4.03□□□□□ -1.76
VMP1-212ENST00000591782 TMPRSS11DO60235 418 aa4.03□□□□□ -1.76
VMP1-212ENST00000591782 CBFA2T3O75081 653 aa4.03□□□□□ -1.76
VMP1-212ENST00000591782 PROP1O75360 226 aa4.03□□□□□ -1.76
VMP1-212ENST00000591782 NHLRC4P0CG21 123 aaPredicted RBP4.03□□□□□ -1.76
VMP1-212ENST00000591782 ADRA1DP25100 572 aa4.03□□□□□ -1.76
VMP1-212ENST00000591782 PBX1P40424 430 aa4.03□□□□□ -1.76
VMP1-212ENST00000591782 TECP42680 631 aa4.03□□□□□ -1.76
VMP1-212ENST00000591782 MMP14P50281 582 aa4.03□□□□□ -1.76
VMP1-212ENST00000591782 RENBPP51606 427 aa4.03□□□□□ -1.76
VMP1-212ENST00000591782 HOXA4Q00056 320 aaPredicted RBP4.03□□□□□ -1.76
VMP1-212ENST00000591782 NSUN2Q08J23 767 aaKnown RBP eCLIP4.03□□□□□ -1.76
VMP1-212ENST00000591782 MTAPQ13126 283 aa4.03□□□□□ -1.76
VMP1-212ENST00000591782 GRM1Q13255 1194 aa4.03□□□□□ -1.76
VMP1-212ENST00000591782 ATP1A4Q13733 1029 aa4.03□□□□□ -1.76
VMP1-212ENST00000591782 ACOX1Q15067 660 aa4.03□□□□□ -1.76
VMP1-212ENST00000591782 TMEM119Q4V9L6 283 aa4.03□□□□□ -1.76
VMP1-212ENST00000591782 FCRLBQ6BAA4 426 aa4.03□□□□□ -1.76
VMP1-212ENST00000591782 SUMO4Q6EEV6 95 aa4.03□□□□□ -1.76
VMP1-212ENST00000591782 C1orf228Q6PIY5 440 aa4.03□□□□□ -1.76
VMP1-212ENST00000591782 TRIM72Q6ZMU5 477 aa4.03□□□□□ -1.76
VMP1-212ENST00000591782 ZNF788Q6ZQV5 615 aa4.03□□□□□ -1.76
VMP1-212ENST00000591782 RINLQ6ZS11 566 aa4.03□□□□□ -1.76
VMP1-212ENST00000591782 BCDIN3DQ7Z5W3 292 aaKnown RBP4.03□□□□□ -1.76
VMP1-212ENST00000591782 VPS37AQ8NEZ2 397 aa4.03□□□□□ -1.76
VMP1-212ENST00000591782 DAZAP1Q96EP5 407 aaKnown RBP4.03□□□□□ -1.76
VMP1-212ENST00000591782 TMEM41AQ96HV5 264 aa4.03□□□□□ -1.76
VMP1-212ENST00000591782 VPS50Q96JG6 964 aa4.03□□□□□ -1.76
VMP1-212ENST00000591782 SNX18Q96RF0 628 aa4.03□□□□□ -1.76
VMP1-212ENST00000591782 CRAMP1Q96RY5 1269 aa4.03□□□□□ -1.76
VMP1-212ENST00000591782 MAP7D2Q96T17 732 aa4.03□□□□□ -1.76
VMP1-212ENST00000591782 CRB3Q9BUF7 120 aa4.03□□□□□ -1.76
VMP1-212ENST00000591782 TTLL2Q9BWV7 592 aa4.03□□□□□ -1.76
VMP1-212ENST00000591782 WDR12Q9GZL7 423 aaKnown RBP4.03□□□□□ -1.76
VMP1-212ENST00000591782 NECTIN3Q9NQS3 549 aa4.03□□□□□ -1.76
VMP1-212ENST00000591782 SNX15Q9NRS6 342 aa4.03□□□□□ -1.76
VMP1-212ENST00000591782 RBM28Q9NW13 759 aaKnown RBP4.03□□□□□ -1.76
VMP1-212ENST00000591782 ASIC5Q9NY37 505 aa4.03□□□□□ -1.76
VMP1-212ENST00000591782 TERF2IPQ9NYB0 399 aa4.03□□□□□ -1.76
VMP1-212ENST00000591782 IGSF9Q9P2J2 1179 aa4.03□□□□□ -1.76
VMP1-212ENST00000591782 MAGED2Q9UNF1 606 aaPredicted RBP4.03□□□□□ -1.76
VMP1-212ENST00000591782 LRCH1Q9Y2L9 728 aa4.03□□□□□ -1.76
VMP1-212ENST00000591782 A0A087WV62 115 aa4.02□□□□□ -1.77
VMP1-212ENST00000591782 TCERG1O14776 1098 aaKnown RBP4.02□□□□□ -1.77
VMP1-212ENST00000591782 TPD52L2O43399 206 aaKnown RBP4.02□□□□□ -1.77
VMP1-212ENST00000591782 PEX14O75381 377 aa4.02□□□□□ -1.77
VMP1-212ENST00000591782 VIPP01282 170 aa4.02□□□□□ -1.77
VMP1-212ENST00000591782 SRGAP2BP0DMP2 458 aa4.02□□□□□ -1.77
VMP1-212ENST00000591782 COPB1P53618 953 aaKnown RBP4.02□□□□□ -1.77
VMP1-212ENST00000591782 TFF2Q03403 129 aa4.02□□□□□ -1.77
VMP1-212ENST00000591782 MORC3Q14149 939 aa4.02□□□□□ -1.77
VMP1-212ENST00000591782 RALBP1Q15311 655 aa4.02□□□□□ -1.77
VMP1-212ENST00000591782 AASDHQ4L235 1098 aaPredicted RBP4.02□□□□□ -1.77
VMP1-212ENST00000591782 TMEM196Q5HYL7 178 aa4.02□□□□□ -1.77
VMP1-212ENST00000591782 DENND2CQ68D51 928 aa4.02□□□□□ -1.77
VMP1-212ENST00000591782 GGT6Q6P531 493 aa4.02□□□□□ -1.77
VMP1-212ENST00000591782 P3H2Q8IVL5 708 aa4.02□□□□□ -1.77
VMP1-212ENST00000591782 PNPLA1Q8N8W4 532 aa4.02□□□□□ -1.77
VMP1-212ENST00000591782 NELL1Q92832 810 aa4.02□□□□□ -1.77
VMP1-212ENST00000591782 RPS6KC1Q96S38 1066 aa4.02□□□□□ -1.77
VMP1-212ENST00000591782 UBA5Q9GZZ9 404 aa4.02□□□□□ -1.77
VMP1-212ENST00000591782 TMEM8AQ9HCN3 771 aa4.02□□□□□ -1.77
VMP1-212ENST00000591782 TFCP2L1Q9NZI6 479 aa4.02□□□□□ -1.77
VMP1-212ENST00000591782 TCRBV5S1A1TA0A578 114 aa4.01□□□□□ -1.77
VMP1-212ENST00000591782 MANSC4A6NHS7 340 aaPredicted RBP4.01□□□□□ -1.77
VMP1-212ENST00000591782 AQP12BA6NM10 295 aa4.01□□□□□ -1.77
VMP1-212ENST00000591782 F5H423 210 aaPredicted RBP4.01□□□□□ -1.77
VMP1-212ENST00000591782 H7C1Q1 480 aa4.01□□□□□ -1.77
VMP1-212ENST00000591782 PIP5K1BO14986 540 aa4.01□□□□□ -1.77
VMP1-212ENST00000591782 FFAR2O15552 330 aa4.01□□□□□ -1.77
VMP1-212ENST00000591782 C1RP00736 705 aa4.01□□□□□ -1.77
VMP1-212ENST00000591782 APEHP13798 732 aaKnown RBP4.01□□□□□ -1.77
VMP1-212ENST00000591782 DRD1P21728 446 aa4.01□□□□□ -1.77
VMP1-212ENST00000591782 NHLH1Q02575 133 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms