RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 SMOC1Q9H4F8 434 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 MAGEF1Q9HAY2 307 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 CRTAC1Q9NQ79 661 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 ARHGEF4Q9NR80 690 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 COMMD8Q9NX08 183 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 FAM13BQ9NYF5 915 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 CFAP97Q9P2B7 532 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 USP25Q9UHP3 1055 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 EVLQ9UI08 416 aaPredicted RBP10.01□□□□□ -0.81
BRCA1-226ENST00000591534 SH3BP1Q9Y3L3 701 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 UBE4BO95155 1302 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 A0A0A0MRY4 1105 aa10□□□□□ -0.81
BRCA1-226ENST00000591534 LNP1A1A4G5 178 aa10□□□□□ -0.81
BRCA1-226ENST00000591534 TMEM8BA6NDV4 472 aa10□□□□□ -0.81
BRCA1-226ENST00000591534 TNFRSF10BO14763 440 aa10□□□□□ -0.81
BRCA1-226ENST00000591534 CUTAO60888 179 aa10□□□□□ -0.81
BRCA1-226ENST00000591534 OLFM2O95897 454 aa10□□□□□ -0.81
BRCA1-226ENST00000591534 CYP17A1P05093 508 aa10□□□□□ -0.81
BRCA1-226ENST00000591534 PROS1P07225 676 aa10□□□□□ -0.81
BRCA1-226ENST00000591534 ADH5P11766 374 aa10□□□□□ -0.81
BRCA1-226ENST00000591534 P4HA1P13674 534 aa10□□□□□ -0.81
BRCA1-226ENST00000591534 HOXC13P31276 330 aa10□□□□□ -0.81
BRCA1-226ENST00000591534 HOXD12P35452 270 aa10□□□□□ -0.81
BRCA1-226ENST00000591534 OPRD1P41143 372 aa10□□□□□ -0.81
BRCA1-226ENST00000591534 ATXN3P54252 364 aaPredicted RBP10□□□□□ -0.81
BRCA1-226ENST00000591534 ASIC1P78348 528 aa10□□□□□ -0.81
BRCA1-226ENST00000591534 GOLGA8FQ08AF8 430 aa10□□□□□ -0.81
BRCA1-226ENST00000591534 GOLGA8DPQ0D2H9 430 aa10□□□□□ -0.81
BRCA1-226ENST00000591534 CLN3Q13286 438 aa10□□□□□ -0.81
BRCA1-226ENST00000591534 PSMD6Q15008 389 aa10□□□□□ -0.81
BRCA1-226ENST00000591534 HECTD3Q5T447 861 aa10□□□□□ -0.81
BRCA1-226ENST00000591534 SH3PXD2AQ5TCZ1 1133 aa10□□□□□ -0.81
BRCA1-226ENST00000591534 NAIF1Q69YI7 327 aaPredicted RBP10□□□□□ -0.81
BRCA1-226ENST00000591534 TCEAL6Q6IPX3 200 aa10□□□□□ -0.81
BRCA1-226ENST00000591534 SDE2Q6IQ49 451 aa10□□□□□ -0.81
BRCA1-226ENST00000591534 SLC36A4Q6YBV0 504 aa10□□□□□ -0.81
BRCA1-226ENST00000591534 PGBD3Q8N328 593 aa10□□□□□ -0.81
BRCA1-226ENST00000591534 CCDC33Q8N5R6 958 aa10□□□□□ -0.81
BRCA1-226ENST00000591534 XXYLT1Q8NBI6 393 aa10□□□□□ -0.81
BRCA1-226ENST00000591534 TXNDC5Q8NBS9 432 aaKnown RBP10□□□□□ -0.81
BRCA1-226ENST00000591534 MDGA1Q8NFP4 955 aa10□□□□□ -0.81
BRCA1-226ENST00000591534 CEP76Q8TAP6 659 aa10□□□□□ -0.81
BRCA1-226ENST00000591534 ZNF507Q8TCN5 953 aa10□□□□□ -0.81
BRCA1-226ENST00000591534 PIGKQ92643 395 aa10□□□□□ -0.81
BRCA1-226ENST00000591534 EZH1Q92800 747 aaPredicted RBP10□□□□□ -0.81
BRCA1-226ENST00000591534 TCEAL3Q969E4 200 aa10□□□□□ -0.81
BRCA1-226ENST00000591534 FBXO32Q969P5 355 aa10□□□□□ -0.81
BRCA1-226ENST00000591534 CCDC127Q96BQ5 260 aa10□□□□□ -0.81
BRCA1-226ENST00000591534 CGRRF1Q99675 332 aa10□□□□□ -0.81
BRCA1-226ENST00000591534 AGPAT3Q9NRZ7 376 aa10□□□□□ -0.81
BRCA1-226ENST00000591534 POLR3BQ9NW08 1133 aaPredicted RBP10□□□□□ -0.81
BRCA1-226ENST00000591534 SMPD4Q9NXE4 827 aa10□□□□□ -0.81
BRCA1-226ENST00000591534 TSC2P49815 1807 aa10□□□□□ -0.81
BRCA1-226ENST00000591534 TBC1D3BA6NDS4 549 aa9.99□□□□□ -0.81
BRCA1-226ENST00000591534 LCE2BO14633 110 aa9.99□□□□□ -0.81
BRCA1-226ENST00000591534 AP5Z1O43299 807 aa9.99□□□□□ -0.81
BRCA1-226ENST00000591534 HCRTO43612 131 aa9.99□□□□□ -0.81
BRCA1-226ENST00000591534 KLF8O95600 359 aaPredicted RBP9.99□□□□□ -0.81
BRCA1-226ENST00000591534 OAS1P00973 400 aaKnown RBP9.99□□□□□ -0.81
BRCA1-226ENST00000591534 CASP1P29466 404 aa9.99□□□□□ -0.81
BRCA1-226ENST00000591534 P2RY2P41231 377 aa9.99□□□□□ -0.81
BRCA1-226ENST00000591534 TUBP50607 506 aa9.99□□□□□ -0.81
BRCA1-226ENST00000591534 ZNF252P-AS1Q0IIN9 211 aa9.99□□□□□ -0.81
BRCA1-226ENST00000591534 IFRD2Q12894 506 aaPredicted RBP9.99□□□□□ -0.81
BRCA1-226ENST00000591534 FAM26FQ5R3K3 315 aa9.99□□□□□ -0.81
BRCA1-226ENST00000591534 CNNM4Q6P4Q7 775 aa9.99□□□□□ -0.81
BRCA1-226ENST00000591534 SYT12Q8IV01 421 aa9.99□□□□□ -0.81
BRCA1-226ENST00000591534 ALLCQ8N6M5 410 aa9.99□□□□□ -0.81
BRCA1-226ENST00000591534 B3GALNT2Q8NCR0 500 aa9.99□□□□□ -0.81
BRCA1-226ENST00000591534 GLIS3Q8NEA6 775 aa9.99□□□□□ -0.81
BRCA1-226ENST00000591534 OLIG1Q8TAK6 271 aa9.99□□□□□ -0.81
BRCA1-226ENST00000591534 HPS3Q969F9 1004 aa9.99□□□□□ -0.81
BRCA1-226ENST00000591534 FAM84AQ96KN4 292 aa9.99□□□□□ -0.81
BRCA1-226ENST00000591534 DUSP9Q99956 384 aaKnown RBP9.99□□□□□ -0.81
BRCA1-226ENST00000591534 MED10Q9BTT4 135 aa9.99□□□□□ -0.81
BRCA1-226ENST00000591534 TRIM9Q9C026 710 aa9.99□□□□□ -0.81
BRCA1-226ENST00000591534 RNF38Q9H0F5 515 aa9.99□□□□□ -0.81
BRCA1-226ENST00000591534 FBXO44Q9H4M3 255 aa9.99□□□□□ -0.81
BRCA1-226ENST00000591534 KBTBD4Q9NVX7 518 aa9.99□□□□□ -0.81
BRCA1-226ENST00000591534 DEC1Q9P2X7 70 aa9.99□□□□□ -0.81
BRCA1-226ENST00000591534 NXF1Q9UBU9 619 aaKnown RBP9.99□□□□□ -0.81
BRCA1-226ENST00000591534 PCDHA7Q9UN72 937 aa9.99□□□□□ -0.81
BRCA1-226ENST00000591534 INVSQ9Y283 1065 aa9.99□□□□□ -0.81
BRCA1-226ENST00000591534 KMT2BQ9UMN6 2715 aaPredicted RBP9.99□□□□□ -0.81
BRCA1-226ENST00000591534 SCN1AP35498 2009 aa9.99□□□□□ -0.81
BRCA1-226ENST00000591534 CDK2AP1O14519 115 aa9.98□□□□□ -0.81
BRCA1-226ENST00000591534 EXOC3O60645 756 aa9.98□□□□□ -0.81
BRCA1-226ENST00000591534 ICMTO60725 284 aa9.98□□□□□ -0.81
BRCA1-226ENST00000591534 ZNF217O75362 1048 aa9.98□□□□□ -0.81
BRCA1-226ENST00000591534 CST3P01034 146 aaPredicted RBP9.98□□□□□ -0.81
BRCA1-226ENST00000591534 CMA1P23946 247 aa9.98□□□□□ -0.81
BRCA1-226ENST00000591534 CYP2J2P51589 502 aa9.98□□□□□ -0.81
BRCA1-226ENST00000591534 CYP24A1Q07973 514 aa9.98□□□□□ -0.81
BRCA1-226ENST00000591534 BIRC3Q13489 604 aa9.98□□□□□ -0.81
BRCA1-226ENST00000591534 HNRNPDQ14103 355 aaKnown RBP9.98□□□□□ -0.81
BRCA1-226ENST00000591534 E2F5Q15329 346 aa9.98□□□□□ -0.81
BRCA1-226ENST00000591534 CCDC142Q17RM4 750 aa9.98□□□□□ -0.81
BRCA1-226ENST00000591534 UAP1L1Q3KQV9 507 aa9.98□□□□□ -0.81
BRCA1-226ENST00000591534 TRIM61Q5EBN2 209 aa9.98□□□□□ -0.81
BRCA1-226ENST00000591534 SNX30Q5VWJ9 437 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms